Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNRNP40Q96DI7 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SNRNP40Q96DI7 HLA-L-209ENST00000420110 1011 ntBASIC20.22■□□□□ 0.83
SNRNP40Q96DI7 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SNRNP40Q96DI7 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.22■□□□□ 0.83
SNRNP40Q96DI7 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.22■□□□□ 0.83
SNRNP40Q96DI7 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.22■□□□□ 0.83
SNRNP40Q96DI7 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNRNP40Q96DI7 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SNRNP40Q96DI7 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNRNP40Q96DI7 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.21■□□□□ 0.83
SNRNP40Q96DI7 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.21■□□□□ 0.83
SNRNP40Q96DI7 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.21■□□□□ 0.83
SNRNP40Q96DI7 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNRNP40Q96DI7 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SNRNP40Q96DI7 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SNRNP40Q96DI7 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNRNP40Q96DI7 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNRNP40Q96DI7 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SNRNP40Q96DI7 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.2■□□□□ 0.82
SNRNP40Q96DI7 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SNRNP40Q96DI7 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SNRNP40Q96DI7 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.2■□□□□ 0.82
SNRNP40Q96DI7 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SNRNP40Q96DI7 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
SNRNP40Q96DI7 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SNRNP40Q96DI7 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNRNP40Q96DI7 AC145676.1-201ENST00000514988 2004 ntBASIC20.2■□□□□ 0.82
SNRNP40Q96DI7 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNRNP40Q96DI7 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.2■□□□□ 0.82
SNRNP40Q96DI7 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNRNP40Q96DI7 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
SNRNP40Q96DI7 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.19■□□□□ 0.82
SNRNP40Q96DI7 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.19■□□□□ 0.82
SNRNP40Q96DI7 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNRNP40Q96DI7 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
SNRNP40Q96DI7 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.19■□□□□ 0.82
SNRNP40Q96DI7 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SNRNP40Q96DI7 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNRNP40Q96DI7 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.19■□□□□ 0.82
SNRNP40Q96DI7 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.19■□□□□ 0.82
SNRNP40Q96DI7 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SNRNP40Q96DI7 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SNRNP40Q96DI7 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNRNP40Q96DI7 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.18■□□□□ 0.82
SNRNP40Q96DI7 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNRNP40Q96DI7 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNRNP40Q96DI7 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.18■□□□□ 0.82
SNRNP40Q96DI7 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.18■□□□□ 0.82
SNRNP40Q96DI7 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNRNP40Q96DI7 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SNRNP40Q96DI7 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.18■□□□□ 0.82
SNRNP40Q96DI7 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNRNP40Q96DI7 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SNRNP40Q96DI7 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNRNP40Q96DI7 AP005435.1-201ENST00000529293 1178 ntBASIC20.18■□□□□ 0.82
SNRNP40Q96DI7 AC105233.4-201ENST00000642045 216 ntBASIC20.18■□□□□ 0.82
SNRNP40Q96DI7 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.18■□□□□ 0.82
SNRNP40Q96DI7 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNRNP40Q96DI7 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNRNP40Q96DI7 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNRNP40Q96DI7 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.17■□□□□ 0.82
SNRNP40Q96DI7 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.17■□□□□ 0.82
SNRNP40Q96DI7 AC080038.1-201ENST00000611274 1154 ntBASIC20.17■□□□□ 0.82
SNRNP40Q96DI7 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SNRNP40Q96DI7 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SNRNP40Q96DI7 FP325331.1-202ENST00000623531 1380 ntBASIC20.17■□□□□ 0.82
SNRNP40Q96DI7 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SNRNP40Q96DI7 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNRNP40Q96DI7 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNRNP40Q96DI7 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNRNP40Q96DI7 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SNRNP40Q96DI7 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNRNP40Q96DI7 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.16■□□□□ 0.82
SNRNP40Q96DI7 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SNRNP40Q96DI7 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.16■□□□□ 0.82
SNRNP40Q96DI7 DUX4L4-201ENST00000566884 1269 ntBASIC20.16■□□□□ 0.82
SNRNP40Q96DI7 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.16■□□□□ 0.82
SNRNP40Q96DI7 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.16■□□□□ 0.82
SNRNP40Q96DI7 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.16■□□□□ 0.82
SNRNP40Q96DI7 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SNRNP40Q96DI7 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNRNP40Q96DI7 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
SNRNP40Q96DI7 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.15■□□□□ 0.82
SNRNP40Q96DI7 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.15■□□□□ 0.82
SNRNP40Q96DI7 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.15■□□□□ 0.82
SNRNP40Q96DI7 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.15■□□□□ 0.82
SNRNP40Q96DI7 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SNRNP40Q96DI7 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SNRNP40Q96DI7 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
SNRNP40Q96DI7 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
SNRNP40Q96DI7 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.15■□□□□ 0.82
SNRNP40Q96DI7 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.15■□□□□ 0.82
SNRNP40Q96DI7 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.15■□□□□ 0.82
SNRNP40Q96DI7 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
SNRNP40Q96DI7 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
SNRNP40Q96DI7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SNRNP40Q96DI7 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.14■□□□□ 0.81
SNRNP40Q96DI7 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SNRNP40Q96DI7 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms