Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
NIPAL1Q6NVV3 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
NIPAL1Q6NVV3 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
NIPAL1Q6NVV3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.39■■□□□ 1.01
NIPAL1Q6NVV3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.39■■□□□ 1.01
NIPAL1Q6NVV3 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NIPAL1Q6NVV3 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NIPAL1Q6NVV3 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NIPAL1Q6NVV3 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NIPAL1Q6NVV3 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NIPAL1Q6NVV3 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
NIPAL1Q6NVV3 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NIPAL1Q6NVV3 AC008406.3-201ENST00000620001 1374 ntBASIC21.38■■□□□ 1.01
NIPAL1Q6NVV3 AC009102.2-201ENST00000606772 1639 ntBASIC21.38■■□□□ 1.01
NIPAL1Q6NVV3 SRD5A1P1-201ENST00000442297 786 ntBASIC21.38■■□□□ 1.01
NIPAL1Q6NVV3 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.38■■□□□ 1.01
NIPAL1Q6NVV3 AL512631.2-201ENST00000604634 923 ntBASIC21.38■■□□□ 1.01
NIPAL1Q6NVV3 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
NIPAL1Q6NVV3 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NIPAL1Q6NVV3 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.38■■□□□ 1.01
NIPAL1Q6NVV3 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
NIPAL1Q6NVV3 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
NIPAL1Q6NVV3 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NIPAL1Q6NVV3 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NIPAL1Q6NVV3 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
NIPAL1Q6NVV3 AC131281.2-201ENST00000520478 145 ntBASIC21.37■■□□□ 1.01
NIPAL1Q6NVV3 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NIPAL1Q6NVV3 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NIPAL1Q6NVV3 AC241377.3-202ENST00000626088 1088 ntBASIC21.37■■□□□ 1.01
NIPAL1Q6NVV3 AC241585.3-202ENST00000628937 1088 ntBASIC21.37■■□□□ 1.01
NIPAL1Q6NVV3 AC245100.8-202ENST00000629247 1058 ntBASIC21.37■■□□□ 1.01
NIPAL1Q6NVV3 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.37■■□□□ 1.01
NIPAL1Q6NVV3 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NIPAL1Q6NVV3 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NIPAL1Q6NVV3 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
NIPAL1Q6NVV3 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NIPAL1Q6NVV3 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
NIPAL1Q6NVV3 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
NIPAL1Q6NVV3 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NIPAL1Q6NVV3 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NIPAL1Q6NVV3 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NIPAL1Q6NVV3 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NIPAL1Q6NVV3 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
NIPAL1Q6NVV3 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.36■■□□□ 1.01
NIPAL1Q6NVV3 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.35■■□□□ 1.01
NIPAL1Q6NVV3 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
NIPAL1Q6NVV3 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NIPAL1Q6NVV3 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.35■■□□□ 1.01
NIPAL1Q6NVV3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.35■■□□□ 1.01
NIPAL1Q6NVV3 FP325331.1-202ENST00000623531 1380 ntBASIC21.35■■□□□ 1.01
NIPAL1Q6NVV3 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
NIPAL1Q6NVV3 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.35■■□□□ 1.01
NIPAL1Q6NVV3 C17orf82-201ENST00000623772 1530 ntBASIC21.34■■□□□ 1.01
NIPAL1Q6NVV3 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NIPAL1Q6NVV3 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.34■■□□□ 1.01
NIPAL1Q6NVV3 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.34■■□□□ 1.01
NIPAL1Q6NVV3 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NIPAL1Q6NVV3 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.34■■□□□ 1.01
NIPAL1Q6NVV3 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.34■■□□□ 1.01
NIPAL1Q6NVV3 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
NIPAL1Q6NVV3 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
NIPAL1Q6NVV3 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
NIPAL1Q6NVV3 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NIPAL1Q6NVV3 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NIPAL1Q6NVV3 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
NIPAL1Q6NVV3 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
NIPAL1Q6NVV3 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.34■■□□□ 1.01
NIPAL1Q6NVV3 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NIPAL1Q6NVV3 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
NIPAL1Q6NVV3 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NIPAL1Q6NVV3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.34■■□□□ 1.01
NIPAL1Q6NVV3 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
NIPAL1Q6NVV3 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
NIPAL1Q6NVV3 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
NIPAL1Q6NVV3 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
NIPAL1Q6NVV3 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.33■■□□□ 1.01
NIPAL1Q6NVV3 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
NIPAL1Q6NVV3 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.33■■□□□ 1.01
NIPAL1Q6NVV3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.33■■□□□ 1.01
NIPAL1Q6NVV3 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.33■■□□□ 1.01
NIPAL1Q6NVV3 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
NIPAL1Q6NVV3 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.33■■□□□ 1
NIPAL1Q6NVV3 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.32■■□□□ 1
NIPAL1Q6NVV3 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NIPAL1Q6NVV3 AL117328.2-201ENST00000624617 1940 ntBASIC21.32■■□□□ 1
NIPAL1Q6NVV3 ABCB10P4-201ENST00000566803 2184 ntBASIC21.32■■□□□ 1
NIPAL1Q6NVV3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.32■■□□□ 1
NIPAL1Q6NVV3 DUX4L19-201ENST00000557448 1267 ntBASIC21.32■■□□□ 1
NIPAL1Q6NVV3 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NIPAL1Q6NVV3 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.32■■□□□ 1
NIPAL1Q6NVV3 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.32■■□□□ 1
NIPAL1Q6NVV3 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NIPAL1Q6NVV3 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NIPAL1Q6NVV3 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
NIPAL1Q6NVV3 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NIPAL1Q6NVV3 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NIPAL1Q6NVV3 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.31■■□□□ 1
NIPAL1Q6NVV3 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.31■■□□□ 1
NIPAL1Q6NVV3 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.31■■□□□ 1
NIPAL1Q6NVV3 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms