Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PPP1R3DO95685 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
PPP1R3DO95685 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PPP1R3DO95685 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PPP1R3DO95685 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PPP1R3DO95685 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
PPP1R3DO95685 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PPP1R3DO95685 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PPP1R3DO95685 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
PPP1R3DO95685 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.12■□□□□ 0.81
PPP1R3DO95685 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.12■□□□□ 0.81
PPP1R3DO95685 LINC00565-201ENST00000562710 2331 ntBASIC20.11■□□□□ 0.81
PPP1R3DO95685 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.11■□□□□ 0.81
PPP1R3DO95685 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PPP1R3DO95685 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
PPP1R3DO95685 ECEL1P1-201ENST00000373592 1742 ntBASIC20.11■□□□□ 0.81
PPP1R3DO95685 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.11■□□□□ 0.81
PPP1R3DO95685 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.11■□□□□ 0.81
PPP1R3DO95685 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
PPP1R3DO95685 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.11■□□□□ 0.81
PPP1R3DO95685 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PPP1R3DO95685 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.11■□□□□ 0.81
PPP1R3DO95685 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.11■□□□□ 0.81
PPP1R3DO95685 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PPP1R3DO95685 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PPP1R3DO95685 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.11■□□□□ 0.81
PPP1R3DO95685 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PPP1R3DO95685 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.1■□□□□ 0.81
PPP1R3DO95685 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PPP1R3DO95685 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
PPP1R3DO95685 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.1■□□□□ 0.81
PPP1R3DO95685 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.1■□□□□ 0.81
PPP1R3DO95685 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.1■□□□□ 0.81
PPP1R3DO95685 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.1■□□□□ 0.81
PPP1R3DO95685 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.1■□□□□ 0.81
PPP1R3DO95685 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.1■□□□□ 0.81
PPP1R3DO95685 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PPP1R3DO95685 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PPP1R3DO95685 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PPP1R3DO95685 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
PPP1R3DO95685 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PPP1R3DO95685 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PPP1R3DO95685 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
PPP1R3DO95685 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PPP1R3DO95685 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PPP1R3DO95685 ESRRAP2-201ENST00000418437 1549 ntBASIC20.09■□□□□ 0.81
PPP1R3DO95685 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.09■□□□□ 0.81
PPP1R3DO95685 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.09■□□□□ 0.81
PPP1R3DO95685 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.09■□□□□ 0.81
PPP1R3DO95685 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
PPP1R3DO95685 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
PPP1R3DO95685 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PPP1R3DO95685 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PPP1R3DO95685 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PPP1R3DO95685 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PPP1R3DO95685 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PPP1R3DO95685 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.08■□□□□ 0.81
PPP1R3DO95685 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PPP1R3DO95685 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.08■□□□□ 0.81
PPP1R3DO95685 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.08■□□□□ 0.81
PPP1R3DO95685 AL031848.2-201ENST00000607670 837 ntBASIC20.08■□□□□ 0.81
PPP1R3DO95685 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
PPP1R3DO95685 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PPP1R3DO95685 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
PPP1R3DO95685 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PPP1R3DO95685 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PPP1R3DO95685 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
PPP1R3DO95685 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
PPP1R3DO95685 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PPP1R3DO95685 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.07■□□□□ 0.8
PPP1R3DO95685 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
PPP1R3DO95685 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PPP1R3DO95685 AC137630.3-201ENST00000607245 391 ntBASIC20.07■□□□□ 0.8
PPP1R3DO95685 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PPP1R3DO95685 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.07■□□□□ 0.8
PPP1R3DO95685 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PPP1R3DO95685 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.07■□□□□ 0.8
PPP1R3DO95685 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PPP1R3DO95685 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PPP1R3DO95685 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PPP1R3DO95685 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PPP1R3DO95685 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
PPP1R3DO95685 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.07■□□□□ 0.8
PPP1R3DO95685 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PPP1R3DO95685 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.06■□□□□ 0.8
PPP1R3DO95685 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.06■□□□□ 0.8
PPP1R3DO95685 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
PPP1R3DO95685 CLDN5-201ENST00000403084 2357 ntBASIC20.06■□□□□ 0.8
PPP1R3DO95685 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PPP1R3DO95685 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.06■□□□□ 0.8
PPP1R3DO95685 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PPP1R3DO95685 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.06■□□□□ 0.8
PPP1R3DO95685 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PPP1R3DO95685 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PPP1R3DO95685 AC144652.1-201ENST00000609974 1624 ntBASIC20.05■□□□□ 0.8
PPP1R3DO95685 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PPP1R3DO95685 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PPP1R3DO95685 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PPP1R3DO95685 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
PPP1R3DO95685 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms