Protein–RNA interactions for Protein: O60831

PRAF2, PRA1 family protein 2, humanhuman

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAF2O60831 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRAF2O60831 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
PRAF2O60831 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.83■□□□□ 0.6
PRAF2O60831 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRAF2O60831 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRAF2O60831 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAF2O60831 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAF2O60831 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
PRAF2O60831 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAF2O60831 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
PRAF2O60831 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
PRAF2O60831 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAF2O60831 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
PRAF2O60831 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.82■□□□□ 0.6
PRAF2O60831 FAM99A-202ENST00000538190 1989 ntBASIC18.82■□□□□ 0.6
PRAF2O60831 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRAF2O60831 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PRAF2O60831 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAF2O60831 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PRAF2O60831 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.81■□□□□ 0.6
PRAF2O60831 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.81■□□□□ 0.6
PRAF2O60831 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRAF2O60831 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
PRAF2O60831 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRAF2O60831 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PRAF2O60831 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRAF2O60831 MIR3960-201ENST00000583311 91 ntBASIC18.81■□□□□ 0.6
PRAF2O60831 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRAF2O60831 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRAF2O60831 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRAF2O60831 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRAF2O60831 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PRAF2O60831 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PRAF2O60831 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRAF2O60831 AC080038.3-201ENST00000623346 1952 ntBASIC18.81■□□□□ 0.6
PRAF2O60831 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRAF2O60831 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PRAF2O60831 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAF2O60831 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAF2O60831 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAF2O60831 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRAF2O60831 AC087741.3-201ENST00000624270 1347 ntBASIC18.8■□□□□ 0.6
PRAF2O60831 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PRAF2O60831 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRAF2O60831 DUX4L29-201ENST00000425409 679 ntBASIC18.8■□□□□ 0.6
PRAF2O60831 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.8■□□□□ 0.6
PRAF2O60831 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAF2O60831 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.8■□□□□ 0.6
PRAF2O60831 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PRAF2O60831 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAF2O60831 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAF2O60831 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAF2O60831 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAF2O60831 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
PRAF2O60831 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PRAF2O60831 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAF2O60831 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAF2O60831 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PRAF2O60831 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PRAF2O60831 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.79■□□□□ 0.6
PRAF2O60831 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PRAF2O60831 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAF2O60831 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAF2O60831 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAF2O60831 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAF2O60831 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PRAF2O60831 HLA-V-202ENST00000446817 847 ntBASIC18.79■□□□□ 0.6
PRAF2O60831 BOD1-206ENST00000480951 814 ntTSL 2 BASIC18.79■□□□□ 0.6
PRAF2O60831 DUX4L13-201ENST00000554103 1267 ntBASIC18.79■□□□□ 0.6
PRAF2O60831 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PRAF2O60831 AC044849.2-201ENST00000606596 710 ntBASIC18.79■□□□□ 0.6
PRAF2O60831 DUX4L15-201ENST00000611059 1267 ntBASIC18.79■□□□□ 0.6
PRAF2O60831 DUX4L23-201ENST00000615195 1269 ntBASIC18.79■□□□□ 0.6
PRAF2O60831 DUX4L24-201ENST00000617576 1269 ntBASIC18.79■□□□□ 0.6
PRAF2O60831 DUX4L22-201ENST00000618238 1269 ntBASIC18.79■□□□□ 0.6
PRAF2O60831 DUX4L20-201ENST00000619712 1269 ntBASIC18.79■□□□□ 0.6
PRAF2O60831 DUX4L21-201ENST00000622058 1269 ntBASIC18.79■□□□□ 0.6
PRAF2O60831 DUX4L10-201ENST00000622460 1267 ntBASIC18.79■□□□□ 0.6
PRAF2O60831 DUX4L25-201ENST00000624915 1269 ntBASIC18.79■□□□□ 0.6
PRAF2O60831 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PRAF2O60831 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.79■□□□□ 0.6
PRAF2O60831 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.79■□□□□ 0.6
PRAF2O60831 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAF2O60831 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAF2O60831 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAF2O60831 AP006261.1-201ENST00000584783 668 ntBASIC18.78■□□□□ 0.6
PRAF2O60831 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PRAF2O60831 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRAF2O60831 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PRAF2O60831 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
PRAF2O60831 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRAF2O60831 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRAF2O60831 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRAF2O60831 KRT18P10-201ENST00000388836 1287 ntBASIC18.77■□□□□ 0.6
PRAF2O60831 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC18.77■□□□□ 0.6
PRAF2O60831 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PRAF2O60831 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC18.77■□□□□ 0.6
PRAF2O60831 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRAF2O60831 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRAF2O60831 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms