Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
FOXN3O00409 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
FOXN3O00409 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
FOXN3O00409 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
FOXN3O00409 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
FOXN3O00409 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.93■■□□□ 1.42
FOXN3O00409 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.93■■□□□ 1.42
FOXN3O00409 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
FOXN3O00409 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.93■■□□□ 1.42
FOXN3O00409 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC23.93■■□□□ 1.42
FOXN3O00409 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.93■■□□□ 1.42
FOXN3O00409 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
FOXN3O00409 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
FOXN3O00409 TERT-206ENST00000508104 2486 ntTSL 5 BASIC23.92■■□□□ 1.42
FOXN3O00409 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
FOXN3O00409 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
FOXN3O00409 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
FOXN3O00409 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
FOXN3O00409 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.92■■□□□ 1.42
FOXN3O00409 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.92■■□□□ 1.42
FOXN3O00409 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
FOXN3O00409 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.92■■□□□ 1.42
FOXN3O00409 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
FOXN3O00409 FP325331.1-202ENST00000623531 1380 ntBASIC23.91■■□□□ 1.42
FOXN3O00409 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
FOXN3O00409 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
FOXN3O00409 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
FOXN3O00409 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
FOXN3O00409 LINC01529-204ENST00000636474 1715 ntBASIC23.91■■□□□ 1.42
FOXN3O00409 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.91■■□□□ 1.42
FOXN3O00409 MIR6724-1-201ENST00000616420 92 ntBASIC23.91■■□□□ 1.42
FOXN3O00409 MIR6724-2-201ENST00000616483 92 ntBASIC23.91■■□□□ 1.42
FOXN3O00409 MIR6724-4-201ENST00000617390 92 ntBASIC23.91■■□□□ 1.42
FOXN3O00409 MIR6724-3-201ENST00000622482 92 ntBASIC23.91■■□□□ 1.42
FOXN3O00409 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
FOXN3O00409 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
FOXN3O00409 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.91■■□□□ 1.42
FOXN3O00409 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
FOXN3O00409 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
FOXN3O00409 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
FOXN3O00409 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
FOXN3O00409 GUSBP5-201ENST00000418136 578 ntBASIC23.9■■□□□ 1.42
FOXN3O00409 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
FOXN3O00409 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.9■■□□□ 1.42
FOXN3O00409 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.9■■□□□ 1.42
FOXN3O00409 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
FOXN3O00409 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
FOXN3O00409 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
FOXN3O00409 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.89■■□□□ 1.42
FOXN3O00409 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
FOXN3O00409 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
FOXN3O00409 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.89■■□□□ 1.41
FOXN3O00409 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
FOXN3O00409 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.89■■□□□ 1.41
FOXN3O00409 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.89■■□□□ 1.41
FOXN3O00409 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
FOXN3O00409 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC23.88■■□□□ 1.41
FOXN3O00409 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.88■■□□□ 1.41
FOXN3O00409 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
FOXN3O00409 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
FOXN3O00409 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.88■■□□□ 1.41
FOXN3O00409 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.88■■□□□ 1.41
FOXN3O00409 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.88■■□□□ 1.41
FOXN3O00409 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
FOXN3O00409 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
FOXN3O00409 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
FOXN3O00409 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
FOXN3O00409 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
FOXN3O00409 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.87■■□□□ 1.41
FOXN3O00409 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
FOXN3O00409 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
FOXN3O00409 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
FOXN3O00409 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.87■■□□□ 1.41
FOXN3O00409 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
FOXN3O00409 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC23.87■■□□□ 1.41
FOXN3O00409 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
FOXN3O00409 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
FOXN3O00409 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
FOXN3O00409 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
FOXN3O00409 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
FOXN3O00409 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.86■■□□□ 1.41
FOXN3O00409 KRT16P3-201ENST00000439127 1283 ntBASIC23.86■■□□□ 1.41
FOXN3O00409 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
FOXN3O00409 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.86■■□□□ 1.41
FOXN3O00409 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
FOXN3O00409 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
FOXN3O00409 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
FOXN3O00409 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC23.86■■□□□ 1.41
FOXN3O00409 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
FOXN3O00409 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
FOXN3O00409 AL117328.2-201ENST00000624617 1940 ntBASIC23.85■■□□□ 1.41
FOXN3O00409 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC23.85■■□□□ 1.41
FOXN3O00409 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.85■■□□□ 1.41
FOXN3O00409 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
FOXN3O00409 C17orf82-201ENST00000623772 1530 ntBASIC23.84■■□□□ 1.41
FOXN3O00409 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
FOXN3O00409 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
FOXN3O00409 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
FOXN3O00409 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
FOXN3O00409 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.84■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms