Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 ESRRAP2-201ENST00000418437 1549 ntBASIC24.08■■□□□ 1.45
LRRC53A6NM62 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
LRRC53A6NM62 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
LRRC53A6NM62 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
LRRC53A6NM62 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC24.08■■□□□ 1.44
LRRC53A6NM62 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC24.08■■□□□ 1.44
LRRC53A6NM62 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.44
LRRC53A6NM62 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
LRRC53A6NM62 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC24.07■■□□□ 1.44
LRRC53A6NM62 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
LRRC53A6NM62 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC24.07■■□□□ 1.44
LRRC53A6NM62 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
LRRC53A6NM62 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
LRRC53A6NM62 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
LRRC53A6NM62 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC24.07■■□□□ 1.44
LRRC53A6NM62 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC24.07■■□□□ 1.44
LRRC53A6NM62 AL031848.2-201ENST00000607670 837 ntBASIC24.07■■□□□ 1.44
LRRC53A6NM62 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC24.07■■□□□ 1.44
LRRC53A6NM62 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
LRRC53A6NM62 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC24.07■■□□□ 1.44
LRRC53A6NM62 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
LRRC53A6NM62 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
LRRC53A6NM62 AC144652.1-201ENST00000609974 1624 ntBASIC24.06■■□□□ 1.44
LRRC53A6NM62 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
LRRC53A6NM62 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
LRRC53A6NM62 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC24.06■■□□□ 1.44
LRRC53A6NM62 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
LRRC53A6NM62 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
LRRC53A6NM62 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC24.06■■□□□ 1.44
LRRC53A6NM62 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
LRRC53A6NM62 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
LRRC53A6NM62 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC24.06■■□□□ 1.44
LRRC53A6NM62 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
LRRC53A6NM62 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC24.05■■□□□ 1.44
LRRC53A6NM62 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
LRRC53A6NM62 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
LRRC53A6NM62 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
LRRC53A6NM62 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC24.05■■□□□ 1.44
LRRC53A6NM62 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC24.05■■□□□ 1.44
LRRC53A6NM62 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC24.05■■□□□ 1.44
LRRC53A6NM62 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
LRRC53A6NM62 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC24.05■■□□□ 1.44
LRRC53A6NM62 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
LRRC53A6NM62 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC24.05■■□□□ 1.44
LRRC53A6NM62 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
LRRC53A6NM62 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC24.05■■□□□ 1.44
LRRC53A6NM62 AC242852.2-201ENST00000615738 1807 ntBASIC24.05■■□□□ 1.44
LRRC53A6NM62 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
LRRC53A6NM62 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
LRRC53A6NM62 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
LRRC53A6NM62 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
LRRC53A6NM62 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
LRRC53A6NM62 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC24.04■■□□□ 1.44
LRRC53A6NM62 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC24.04■■□□□ 1.44
LRRC53A6NM62 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC24.04■■□□□ 1.44
LRRC53A6NM62 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
LRRC53A6NM62 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC24.04■■□□□ 1.44
LRRC53A6NM62 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
LRRC53A6NM62 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
LRRC53A6NM62 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
LRRC53A6NM62 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC24.03■■□□□ 1.44
LRRC53A6NM62 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
LRRC53A6NM62 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
LRRC53A6NM62 AC127496.7-201ENST00000625110 1798 ntBASIC24.03■■□□□ 1.44
LRRC53A6NM62 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
LRRC53A6NM62 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
LRRC53A6NM62 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC24.02■■□□□ 1.44
LRRC53A6NM62 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
LRRC53A6NM62 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC24.02■■□□□ 1.44
LRRC53A6NM62 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
LRRC53A6NM62 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
LRRC53A6NM62 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
LRRC53A6NM62 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
LRRC53A6NM62 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC24.02■■□□□ 1.44
LRRC53A6NM62 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
LRRC53A6NM62 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC24.02■■□□□ 1.44
LRRC53A6NM62 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC24.02■■□□□ 1.44
LRRC53A6NM62 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
LRRC53A6NM62 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC24.02■■□□□ 1.43
LRRC53A6NM62 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC24.01■■□□□ 1.43
LRRC53A6NM62 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
LRRC53A6NM62 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC24.01■■□□□ 1.43
LRRC53A6NM62 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC24.01■■□□□ 1.43
LRRC53A6NM62 CLTA-210ENST00000540080 989 ntTSL 2 BASIC24.01■■□□□ 1.43
LRRC53A6NM62 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
LRRC53A6NM62 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
LRRC53A6NM62 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
LRRC53A6NM62 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
LRRC53A6NM62 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
LRRC53A6NM62 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
LRRC53A6NM62 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
LRRC53A6NM62 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC24■■□□□ 1.43
LRRC53A6NM62 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC24■■□□□ 1.43
LRRC53A6NM62 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
LRRC53A6NM62 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
LRRC53A6NM62 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC24■■□□□ 1.43
LRRC53A6NM62 AC021242.3-201ENST00000607598 1377 ntBASIC24■■□□□ 1.43
LRRC53A6NM62 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
LRRC53A6NM62 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
LRRC53A6NM62 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC23.99■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms