Protein–RNA interactions for Protein: A0A0B4J1U6

TRBV9, T-cell receptor beta variable 9 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV9A0A0B4J1U6 HES6-204ENST00000409182 863 ntTSL 2 BASIC17.71■□□□□ 0.43
TRBV9A0A0B4J1U6 CLTA-206ENST00000466396 695 ntTSL 2 BASIC17.71■□□□□ 0.43
TRBV9A0A0B4J1U6 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV9A0A0B4J1U6 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TRBV9A0A0B4J1U6 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.71■□□□□ 0.42
TRBV9A0A0B4J1U6 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TRBV9A0A0B4J1U6 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV9A0A0B4J1U6 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC17.7■□□□□ 0.42
TRBV9A0A0B4J1U6 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC17.7■□□□□ 0.42
TRBV9A0A0B4J1U6 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TRBV9A0A0B4J1U6 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
TRBV9A0A0B4J1U6 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC17.7■□□□□ 0.42
TRBV9A0A0B4J1U6 AC233723.2-201ENST00000623798 2106 ntBASIC17.7■□□□□ 0.42
TRBV9A0A0B4J1U6 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV9A0A0B4J1U6 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TRBV9A0A0B4J1U6 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
TRBV9A0A0B4J1U6 AC137767.1-201ENST00000602918 1920 ntBASIC17.7■□□□□ 0.42
TRBV9A0A0B4J1U6 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV9A0A0B4J1U6 AC005703.6-201ENST00000623265 1329 ntBASIC17.7■□□□□ 0.42
TRBV9A0A0B4J1U6 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV9A0A0B4J1U6 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV9A0A0B4J1U6 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV9A0A0B4J1U6 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV9A0A0B4J1U6 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV9A0A0B4J1U6 GALC-202ENST00000393568 2054 ntTSL 2 BASIC17.69■□□□□ 0.42
TRBV9A0A0B4J1U6 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TRBV9A0A0B4J1U6 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV9A0A0B4J1U6 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV9A0A0B4J1U6 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV9A0A0B4J1U6 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV9A0A0B4J1U6 MTDHP2-201ENST00000601468 714 ntBASIC17.69■□□□□ 0.42
TRBV9A0A0B4J1U6 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV9A0A0B4J1U6 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV9A0A0B4J1U6 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV9A0A0B4J1U6 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TRBV9A0A0B4J1U6 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.69■□□□□ 0.42
TRBV9A0A0B4J1U6 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV9A0A0B4J1U6 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV9A0A0B4J1U6 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV9A0A0B4J1U6 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV9A0A0B4J1U6 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TRBV9A0A0B4J1U6 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV9A0A0B4J1U6 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV9A0A0B4J1U6 STK25-234ENST00000535007 2459 ntTSL 2 BASIC17.69■□□□□ 0.42
TRBV9A0A0B4J1U6 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC17.68■□□□□ 0.42
TRBV9A0A0B4J1U6 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV9A0A0B4J1U6 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TRBV9A0A0B4J1U6 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV9A0A0B4J1U6 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV9A0A0B4J1U6 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
TRBV9A0A0B4J1U6 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV9A0A0B4J1U6 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV9A0A0B4J1U6 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV9A0A0B4J1U6 CREM-229ENST00000474362 1030 ntTSL 2 BASIC17.68■□□□□ 0.42
TRBV9A0A0B4J1U6 EXOG-217ENST00000630638 197 ntTSL 5 BASIC17.68■□□□□ 0.42
TRBV9A0A0B4J1U6 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC17.68■□□□□ 0.42
TRBV9A0A0B4J1U6 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TRBV9A0A0B4J1U6 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TRBV9A0A0B4J1U6 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV9A0A0B4J1U6 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.67■□□□□ 0.42
TRBV9A0A0B4J1U6 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV9A0A0B4J1U6 AC127496.7-201ENST00000625110 1798 ntBASIC17.67■□□□□ 0.42
TRBV9A0A0B4J1U6 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV9A0A0B4J1U6 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV9A0A0B4J1U6 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC17.67■□□□□ 0.42
TRBV9A0A0B4J1U6 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV9A0A0B4J1U6 TRIR-205ENST00000592273 783 ntTSL 3 BASIC17.67■□□□□ 0.42
TRBV9A0A0B4J1U6 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC17.67■□□□□ 0.42
TRBV9A0A0B4J1U6 AC010997.5-201ENST00000609182 354 ntBASIC17.67■□□□□ 0.42
TRBV9A0A0B4J1U6 USF2-207ENST00000595068 1612 ntTSL 5 BASIC17.67■□□□□ 0.42
TRBV9A0A0B4J1U6 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TRBV9A0A0B4J1U6 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV9A0A0B4J1U6 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TRBV9A0A0B4J1U6 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TRBV9A0A0B4J1U6 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV9A0A0B4J1U6 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TRBV9A0A0B4J1U6 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV9A0A0B4J1U6 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TRBV9A0A0B4J1U6 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV9A0A0B4J1U6 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC17.66■□□□□ 0.42
TRBV9A0A0B4J1U6 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TRBV9A0A0B4J1U6 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC17.66■□□□□ 0.42
TRBV9A0A0B4J1U6 EP400NL-214ENST00000641289 2402 ntBASIC17.66■□□□□ 0.42
TRBV9A0A0B4J1U6 UNC93B8-201ENST00000511903 705 ntBASIC17.66■□□□□ 0.42
TRBV9A0A0B4J1U6 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TRBV9A0A0B4J1U6 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV9A0A0B4J1U6 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV9A0A0B4J1U6 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV9A0A0B4J1U6 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV9A0A0B4J1U6 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV9A0A0B4J1U6 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV9A0A0B4J1U6 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TRBV9A0A0B4J1U6 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV9A0A0B4J1U6 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TRBV9A0A0B4J1U6 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV9A0A0B4J1U6 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV9A0A0B4J1U6 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
TRBV9A0A0B4J1U6 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC17.65■□□□□ 0.42
TRBV9A0A0B4J1U6 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV9A0A0B4J1U6 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms