Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.31■■□□□ 1
VCX3BQ9H321 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
VCX3BQ9H321 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
VCX3BQ9H321 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
VCX3BQ9H321 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
VCX3BQ9H321 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
VCX3BQ9H321 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
VCX3BQ9H321 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
VCX3BQ9H321 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
VCX3BQ9H321 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
VCX3BQ9H321 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.3■■□□□ 1
VCX3BQ9H321 FBXW4P1-201ENST00000426721 2239 ntBASIC21.3■■□□□ 1
VCX3BQ9H321 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
VCX3BQ9H321 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
VCX3BQ9H321 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
VCX3BQ9H321 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VCX3BQ9H321 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VCX3BQ9H321 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VCX3BQ9H321 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
VCX3BQ9H321 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
VCX3BQ9H321 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.29■■□□□ 1
VCX3BQ9H321 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.29■■□□□ 1
VCX3BQ9H321 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VCX3BQ9H321 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.29■■□□□ 1
VCX3BQ9H321 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.29■■□□□ 1
VCX3BQ9H321 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.29■■□□□ 1
VCX3BQ9H321 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
VCX3BQ9H321 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.28■■□□□ 1
VCX3BQ9H321 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VCX3BQ9H321 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VCX3BQ9H321 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VCX3BQ9H321 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
VCX3BQ9H321 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
VCX3BQ9H321 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VCX3BQ9H321 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VCX3BQ9H321 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
VCX3BQ9H321 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.28■■□□□ 1
VCX3BQ9H321 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.28■■□□□ 1
VCX3BQ9H321 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VCX3BQ9H321 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.28■■□□□ 1
VCX3BQ9H321 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.28■■□□□ 1
VCX3BQ9H321 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
VCX3BQ9H321 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
VCX3BQ9H321 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
VCX3BQ9H321 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.27■■□□□ 1
VCX3BQ9H321 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VCX3BQ9H321 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.27■■□□□ 1
VCX3BQ9H321 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.27■■□□□ 1
VCX3BQ9H321 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VCX3BQ9H321 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.27■■□□□ 1
VCX3BQ9H321 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.27■■□□□ 1
VCX3BQ9H321 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.27■■□□□ 1
VCX3BQ9H321 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VCX3BQ9H321 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VCX3BQ9H321 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VCX3BQ9H321 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
VCX3BQ9H321 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
VCX3BQ9H321 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
VCX3BQ9H321 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
VCX3BQ9H321 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VCX3BQ9H321 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.26■□□□□ 0.99
VCX3BQ9H321 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VCX3BQ9H321 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.26■□□□□ 0.99
VCX3BQ9H321 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
VCX3BQ9H321 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
VCX3BQ9H321 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VCX3BQ9H321 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
VCX3BQ9H321 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.25■□□□□ 0.99
VCX3BQ9H321 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.25■□□□□ 0.99
VCX3BQ9H321 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
VCX3BQ9H321 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.25■□□□□ 0.99
VCX3BQ9H321 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
VCX3BQ9H321 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.25■□□□□ 0.99
VCX3BQ9H321 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VCX3BQ9H321 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.25■□□□□ 0.99
VCX3BQ9H321 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.25■□□□□ 0.99
VCX3BQ9H321 AL161729.1-201ENST00000604104 1402 ntBASIC21.25■□□□□ 0.99
VCX3BQ9H321 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
VCX3BQ9H321 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.25■□□□□ 0.99
VCX3BQ9H321 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
VCX3BQ9H321 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
VCX3BQ9H321 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.25■□□□□ 0.99
VCX3BQ9H321 AC139530.1-201ENST00000575312 1977 ntBASIC21.25■□□□□ 0.99
VCX3BQ9H321 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VCX3BQ9H321 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.24■□□□□ 0.99
VCX3BQ9H321 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
VCX3BQ9H321 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.24■□□□□ 0.99
VCX3BQ9H321 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.24■□□□□ 0.99
VCX3BQ9H321 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
VCX3BQ9H321 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VCX3BQ9H321 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VCX3BQ9H321 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
VCX3BQ9H321 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VCX3BQ9H321 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
VCX3BQ9H321 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VCX3BQ9H321 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VCX3BQ9H321 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.23■□□□□ 0.99
VCX3BQ9H321 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
VCX3BQ9H321 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
VCX3BQ9H321 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms