Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
CDT1Q9H211 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CDT1Q9H211 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CDT1Q9H211 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
CDT1Q9H211 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC24.39■■□□□ 1.5
CDT1Q9H211 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC24.39■■□□□ 1.5
CDT1Q9H211 EDA-201ENST00000338901 1233 ntBASIC24.39■■□□□ 1.49
CDT1Q9H211 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC24.39■■□□□ 1.49
CDT1Q9H211 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC24.39■■□□□ 1.49
CDT1Q9H211 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC24.39■■□□□ 1.49
CDT1Q9H211 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC24.39■■□□□ 1.49
CDT1Q9H211 AC136469.2-201ENST00000623944 1028 ntBASIC24.39■■□□□ 1.49
CDT1Q9H211 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC24.39■■□□□ 1.49
CDT1Q9H211 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
CDT1Q9H211 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
CDT1Q9H211 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC24.39■■□□□ 1.49
CDT1Q9H211 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CDT1Q9H211 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
CDT1Q9H211 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC24.38■■□□□ 1.49
CDT1Q9H211 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC24.38■■□□□ 1.49
CDT1Q9H211 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
CDT1Q9H211 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC24.38■■□□□ 1.49
CDT1Q9H211 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC24.38■■□□□ 1.49
CDT1Q9H211 SUDS3P1-201ENST00000505831 966 ntBASIC24.38■■□□□ 1.49
CDT1Q9H211 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC24.38■■□□□ 1.49
CDT1Q9H211 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CDT1Q9H211 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
CDT1Q9H211 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
CDT1Q9H211 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CDT1Q9H211 GRAMD4P4-201ENST00000613563 1115 ntBASIC24.37■■□□□ 1.49
CDT1Q9H211 AL355001.2-201ENST00000620617 1191 ntBASIC24.37■■□□□ 1.49
CDT1Q9H211 LINC01529-204ENST00000636474 1715 ntBASIC24.37■■□□□ 1.49
CDT1Q9H211 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CDT1Q9H211 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CDT1Q9H211 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
CDT1Q9H211 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
CDT1Q9H211 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CDT1Q9H211 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC24.36■■□□□ 1.49
CDT1Q9H211 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CDT1Q9H211 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
CDT1Q9H211 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CDT1Q9H211 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CDT1Q9H211 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CDT1Q9H211 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC24.35■■□□□ 1.49
CDT1Q9H211 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CDT1Q9H211 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
CDT1Q9H211 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC24.35■■□□□ 1.49
CDT1Q9H211 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC24.35■■□□□ 1.49
CDT1Q9H211 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC24.35■■□□□ 1.49
CDT1Q9H211 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC24.35■■□□□ 1.49
CDT1Q9H211 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CDT1Q9H211 AP001330.3-201ENST00000520123 633 ntBASIC24.35■■□□□ 1.49
CDT1Q9H211 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC24.35■■□□□ 1.49
CDT1Q9H211 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
CDT1Q9H211 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CDT1Q9H211 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CDT1Q9H211 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC24.34■■□□□ 1.49
CDT1Q9H211 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CDT1Q9H211 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CDT1Q9H211 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CDT1Q9H211 AF213884.3-201ENST00000563833 479 ntBASIC24.34■■□□□ 1.49
CDT1Q9H211 AC142381.2-201ENST00000566120 298 ntBASIC24.34■■□□□ 1.49
CDT1Q9H211 AL499627.2-201ENST00000606283 725 ntBASIC24.34■■□□□ 1.49
CDT1Q9H211 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CDT1Q9H211 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC24.34■■□□□ 1.49
CDT1Q9H211 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CDT1Q9H211 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CDT1Q9H211 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC24.33■■□□□ 1.49
CDT1Q9H211 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CDT1Q9H211 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
CDT1Q9H211 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC24.33■■□□□ 1.49
CDT1Q9H211 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
CDT1Q9H211 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CDT1Q9H211 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
CDT1Q9H211 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.48
CDT1Q9H211 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CDT1Q9H211 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC24.32■■□□□ 1.48
CDT1Q9H211 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CDT1Q9H211 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CDT1Q9H211 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
CDT1Q9H211 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CDT1Q9H211 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC24.32■■□□□ 1.48
CDT1Q9H211 MIR939-201ENST00000401314 82 ntBASIC24.32■■□□□ 1.48
CDT1Q9H211 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC24.32■■□□□ 1.48
CDT1Q9H211 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC24.32■■□□□ 1.48
CDT1Q9H211 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
CDT1Q9H211 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CDT1Q9H211 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
CDT1Q9H211 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC24.31■■□□□ 1.48
CDT1Q9H211 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC24.31■■□□□ 1.48
CDT1Q9H211 AL136967.2-201ENST00000623968 743 ntBASIC24.31■■□□□ 1.48
CDT1Q9H211 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CDT1Q9H211 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CDT1Q9H211 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
CDT1Q9H211 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
CDT1Q9H211 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
CDT1Q9H211 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CDT1Q9H211 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CDT1Q9H211 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC24.3■■□□□ 1.48
CDT1Q9H211 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms