Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SIMC1Q8NDZ2 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SIMC1Q8NDZ2 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.06■□□□□ 0.96
SIMC1Q8NDZ2 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SIMC1Q8NDZ2 AL356441.2-201ENST00000443009 864 ntBASIC21.06■□□□□ 0.96
SIMC1Q8NDZ2 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.06■□□□□ 0.96
SIMC1Q8NDZ2 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.06■□□□□ 0.96
SIMC1Q8NDZ2 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SIMC1Q8NDZ2 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.06■□□□□ 0.96
SIMC1Q8NDZ2 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SIMC1Q8NDZ2 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SIMC1Q8NDZ2 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SIMC1Q8NDZ2 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SIMC1Q8NDZ2 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
SIMC1Q8NDZ2 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
SIMC1Q8NDZ2 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
SIMC1Q8NDZ2 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SIMC1Q8NDZ2 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SIMC1Q8NDZ2 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SIMC1Q8NDZ2 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SIMC1Q8NDZ2 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SIMC1Q8NDZ2 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.05■□□□□ 0.96
SIMC1Q8NDZ2 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
SIMC1Q8NDZ2 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SIMC1Q8NDZ2 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.05■□□□□ 0.96
SIMC1Q8NDZ2 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SIMC1Q8NDZ2 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SIMC1Q8NDZ2 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SIMC1Q8NDZ2 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SIMC1Q8NDZ2 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.05■□□□□ 0.96
SIMC1Q8NDZ2 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.05■□□□□ 0.96
SIMC1Q8NDZ2 MIR6724-1-201ENST00000616420 92 ntBASIC21.05■□□□□ 0.96
SIMC1Q8NDZ2 MIR6724-2-201ENST00000616483 92 ntBASIC21.05■□□□□ 0.96
SIMC1Q8NDZ2 MIR6724-4-201ENST00000617390 92 ntBASIC21.05■□□□□ 0.96
SIMC1Q8NDZ2 MIR6724-3-201ENST00000622482 92 ntBASIC21.05■□□□□ 0.96
SIMC1Q8NDZ2 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
SIMC1Q8NDZ2 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SIMC1Q8NDZ2 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.05■□□□□ 0.96
SIMC1Q8NDZ2 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SIMC1Q8NDZ2 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SIMC1Q8NDZ2 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SIMC1Q8NDZ2 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
SIMC1Q8NDZ2 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SIMC1Q8NDZ2 AC079630.1-202ENST00000618127 1840 ntBASIC21.04■□□□□ 0.96
SIMC1Q8NDZ2 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.04■□□□□ 0.96
SIMC1Q8NDZ2 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SIMC1Q8NDZ2 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SIMC1Q8NDZ2 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.04■□□□□ 0.96
SIMC1Q8NDZ2 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SIMC1Q8NDZ2 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.04■□□□□ 0.96
SIMC1Q8NDZ2 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.04■□□□□ 0.96
SIMC1Q8NDZ2 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.04■□□□□ 0.96
SIMC1Q8NDZ2 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SIMC1Q8NDZ2 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
SIMC1Q8NDZ2 DUSP8P5-201ENST00000422884 1815 ntBASIC21.04■□□□□ 0.96
SIMC1Q8NDZ2 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SIMC1Q8NDZ2 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SIMC1Q8NDZ2 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SIMC1Q8NDZ2 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SIMC1Q8NDZ2 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SIMC1Q8NDZ2 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SIMC1Q8NDZ2 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SIMC1Q8NDZ2 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.03■□□□□ 0.96
SIMC1Q8NDZ2 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SIMC1Q8NDZ2 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SIMC1Q8NDZ2 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SIMC1Q8NDZ2 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.03■□□□□ 0.96
SIMC1Q8NDZ2 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SIMC1Q8NDZ2 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SIMC1Q8NDZ2 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.02■□□□□ 0.96
SIMC1Q8NDZ2 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SIMC1Q8NDZ2 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SIMC1Q8NDZ2 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.02■□□□□ 0.96
SIMC1Q8NDZ2 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.02■□□□□ 0.96
SIMC1Q8NDZ2 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.02■□□□□ 0.96
SIMC1Q8NDZ2 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SIMC1Q8NDZ2 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SIMC1Q8NDZ2 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SIMC1Q8NDZ2 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.02■□□□□ 0.96
SIMC1Q8NDZ2 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SIMC1Q8NDZ2 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SIMC1Q8NDZ2 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
SIMC1Q8NDZ2 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.01■□□□□ 0.95
SIMC1Q8NDZ2 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SIMC1Q8NDZ2 AC092068.2-201ENST00000590491 1708 ntBASIC21.01■□□□□ 0.95
SIMC1Q8NDZ2 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SIMC1Q8NDZ2 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21■□□□□ 0.95
SIMC1Q8NDZ2 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21■□□□□ 0.95
SIMC1Q8NDZ2 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21■□□□□ 0.95
SIMC1Q8NDZ2 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SIMC1Q8NDZ2 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21■□□□□ 0.95
SIMC1Q8NDZ2 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SIMC1Q8NDZ2 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21■□□□□ 0.95
SIMC1Q8NDZ2 AC009102.2-201ENST00000606772 1639 ntBASIC21■□□□□ 0.95
SIMC1Q8NDZ2 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SIMC1Q8NDZ2 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21■□□□□ 0.95
SIMC1Q8NDZ2 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SIMC1Q8NDZ2 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SIMC1Q8NDZ2 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SIMC1Q8NDZ2 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms