Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RFX6Q8HWS3 MIR6722-201ENST00000617286 78 ntBASIC23.27■■□□□ 1.32
RFX6Q8HWS3 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.27■■□□□ 1.32
RFX6Q8HWS3 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
RFX6Q8HWS3 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RFX6Q8HWS3 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.27■■□□□ 1.32
RFX6Q8HWS3 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RFX6Q8HWS3 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.26■■□□□ 1.31
RFX6Q8HWS3 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RFX6Q8HWS3 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.26■■□□□ 1.31
RFX6Q8HWS3 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC23.26■■□□□ 1.31
RFX6Q8HWS3 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RFX6Q8HWS3 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.26■■□□□ 1.31
RFX6Q8HWS3 AC005703.6-201ENST00000623265 1329 ntBASIC23.26■■□□□ 1.31
RFX6Q8HWS3 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RFX6Q8HWS3 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC23.26■■□□□ 1.31
RFX6Q8HWS3 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RFX6Q8HWS3 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RFX6Q8HWS3 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.25■■□□□ 1.31
RFX6Q8HWS3 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.25■■□□□ 1.31
RFX6Q8HWS3 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RFX6Q8HWS3 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RFX6Q8HWS3 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RFX6Q8HWS3 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RFX6Q8HWS3 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
RFX6Q8HWS3 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RFX6Q8HWS3 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC23.24■■□□□ 1.31
RFX6Q8HWS3 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.24■■□□□ 1.31
RFX6Q8HWS3 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
RFX6Q8HWS3 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
RFX6Q8HWS3 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RFX6Q8HWS3 C1orf229-201ENST00000623686 2258 ntBASIC23.24■■□□□ 1.31
RFX6Q8HWS3 Z92544.1-202ENST00000571933 1220 ntBASIC23.24■■□□□ 1.31
RFX6Q8HWS3 AC092028.1-203ENST00000608262 953 ntBASIC23.24■■□□□ 1.31
RFX6Q8HWS3 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
RFX6Q8HWS3 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
RFX6Q8HWS3 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RFX6Q8HWS3 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
RFX6Q8HWS3 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
RFX6Q8HWS3 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.24■■□□□ 1.31
RFX6Q8HWS3 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RFX6Q8HWS3 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RFX6Q8HWS3 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RFX6Q8HWS3 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RFX6Q8HWS3 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.23■■□□□ 1.31
RFX6Q8HWS3 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
RFX6Q8HWS3 MIR4787-201ENST00000607364 84 ntBASIC23.23■■□□□ 1.31
RFX6Q8HWS3 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.23■■□□□ 1.31
RFX6Q8HWS3 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
RFX6Q8HWS3 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.23■■□□□ 1.31
RFX6Q8HWS3 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
RFX6Q8HWS3 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RFX6Q8HWS3 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
RFX6Q8HWS3 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
RFX6Q8HWS3 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
RFX6Q8HWS3 AL353803.4-201ENST00000565882 1934 ntBASIC23.22■■□□□ 1.31
RFX6Q8HWS3 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.22■■□□□ 1.31
RFX6Q8HWS3 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
RFX6Q8HWS3 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
RFX6Q8HWS3 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC23.22■■□□□ 1.31
RFX6Q8HWS3 AC239859.2-201ENST00000444165 318 ntBASIC23.22■■□□□ 1.31
RFX6Q8HWS3 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.22■■□□□ 1.31
RFX6Q8HWS3 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RFX6Q8HWS3 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RFX6Q8HWS3 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RFX6Q8HWS3 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
RFX6Q8HWS3 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
RFX6Q8HWS3 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
RFX6Q8HWS3 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.21■■□□□ 1.31
RFX6Q8HWS3 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
RFX6Q8HWS3 AC009299.2-201ENST00000482477 511 ntBASIC23.21■■□□□ 1.31
RFX6Q8HWS3 AL451085.2-201ENST00000605085 799 ntBASIC23.21■■□□□ 1.31
RFX6Q8HWS3 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
RFX6Q8HWS3 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.21■■□□□ 1.31
RFX6Q8HWS3 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.21■■□□□ 1.31
RFX6Q8HWS3 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
RFX6Q8HWS3 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
RFX6Q8HWS3 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.2■■□□□ 1.3
RFX6Q8HWS3 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
RFX6Q8HWS3 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
RFX6Q8HWS3 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC23.19■■□□□ 1.3
RFX6Q8HWS3 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC23.19■■□□□ 1.3
RFX6Q8HWS3 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.19■■□□□ 1.3
RFX6Q8HWS3 MTDHP2-201ENST00000601468 714 ntBASIC23.19■■□□□ 1.3
RFX6Q8HWS3 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RFX6Q8HWS3 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RFX6Q8HWS3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.18■■□□□ 1.3
RFX6Q8HWS3 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RFX6Q8HWS3 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RFX6Q8HWS3 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
RFX6Q8HWS3 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.18■■□□□ 1.3
RFX6Q8HWS3 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.18■■□□□ 1.3
RFX6Q8HWS3 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RFX6Q8HWS3 AC233723.2-201ENST00000623798 2106 ntBASIC23.18■■□□□ 1.3
RFX6Q8HWS3 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
RFX6Q8HWS3 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RFX6Q8HWS3 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RFX6Q8HWS3 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
RFX6Q8HWS3 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RFX6Q8HWS3 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.17■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms