Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 LAP3-208ENST00000512397 689 ntTSL 217.87■□□□□ 0.455e-8■■■■■ 30.4
U2AF2P26368 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.385e-8■■■■■ 30.4
U2AF2P26368 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC17.05■□□□□ 0.325e-8■■■■■ 30.4
U2AF2P26368 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.195e-8■■■■■ 30.4
U2AF2P26368 RNFT1-202ENST00000466544 1809 ntTSL 215.87■□□□□ 0.135e-8■■■■■ 30.4
U2AF2P26368 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.015e-8■■■■■ 30.4
U2AF2P26368 SCAF11-209ENST00000547018 3271 ntTSL 514.57□□□□□ -0.085e-8■■■■■ 30.4
U2AF2P26368 MRPL13-202ENST00000518696 1418 ntTSL 1 (best)14.27□□□□□ -0.126e-15■■■■■ 30.4
U2AF2P26368 MRPL13-203ENST00000518918 633 ntTSL 214.14□□□□□ -0.156e-15■■■■■ 30.4
U2AF2P26368 SCAF11-201ENST00000266589 2084 ntAPPRIS ALT2 TSL 513.38□□□□□ -0.275e-8■■■■■ 30.4
U2AF2P26368 PDS5B-208ENST00000493653 972 ntTSL 1 (best)12.98□□□□□ -0.335e-8■■■■■ 30.4
U2AF2P26368 CD99P1-201ENST00000414513 3071 ntTSL 212.86□□□□□ -0.355e-8■■■■■ 30.4
U2AF2P26368 LAP3-207ENST00000509583 887 ntTSL 1 (best)12.8□□□□□ -0.365e-8■■■■■ 30.4
U2AF2P26368 MSS51-203ENST00000487126 1991 ntTSL 211.18□□□□□ -0.623e-7■■■■■ 30.4
U2AF2P26368 MSS51-201ENST00000299432 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.643e-7■■■■■ 30.4
U2AF2P26368 CD99P1-202ENST00000430562 984 ntTSL 1 (best)10.02□□□□□ -0.815e-8■■■■■ 30.4
U2AF2P26368 LAP3-206ENST00000508497 651 ntTSL 38.93□□□□□ -0.985e-8■■■■■ 30.4
U2AF2P26368 RNFT1-209ENST00000589113 740 ntTSL 58.91□□□□□ -0.985e-8■■■■■ 30.4
U2AF2P26368 MOCOS-202ENST00000588132 432 ntTSL 36.92□□□□□ -1.35e-8■■■■■ 30.4
U2AF2P26368 GINS1-203ENST00000481735 396 ntTSL 36.82□□□□□ -1.325e-8■■■■■ 30.4
U2AF2P26368 RPS6KC1-203ENST00000468069 784 ntTSL 36.07□□□□□ -1.444e-11■■■■■ 30.4
U2AF2P26368 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.725e-8■■■■■ 30.4
U2AF2P26368 UBA5-207ENST00000469158 584 ntTSL 34.32□□□□□ -1.725e-8■■■■■ 30.4
U2AF2P26368 PDS5B-209ENST00000498550 4238 ntTSL 1 (best)4□□□□□ -1.775e-8■■■■■ 30.4
U2AF2P26368 MRPL13-204ENST00000520677 500 ntTSL 33.94□□□□□ -1.786e-15■■■■■ 30.4
U2AF2P26368 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.825e-8■■■■■ 30.4
U2AF2P26368 PDS5B-204ENST00000466078 1889 ntTSL 23.12□□□□□ -1.915e-8■■■■■ 30.4
U2AF2P26368 RNFT1-205ENST00000484257 618 ntTSL 52.01□□□□□ -2.095e-8■■■■■ 30.4
U2AF2P26368 RNFT1-207ENST00000493737 586 ntTSL 21.65□□□□□ -2.155e-8■■■■■ 30.4
U2AF2P26368 MIPOL1-214ENST00000556940 485 ntTSL 31.19□□□□□ -2.225e-8■■■■■ 30.4
U2AF2P26368 RHOBTB3-210ENST00000510313 990 ntTSL 24.76□□□□□ -1.655e-14■■■■■ 30.4
U2AF2P26368 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.98□□□□□ -1.775e-14■■■■■ 30.4
U2AF2P26368 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC13.37□□□□□ -0.278e-11■■■■■ 30.4
U2AF2P26368 EPM2AIP1-202ENST00000623924 543 ntTSL 57.28□□□□□ -1.248e-11■■■■■ 30.4
U2AF2P26368 EPM2AIP1-203ENST00000624586 513 ntTSL 53.57□□□□□ -1.848e-11■■■■■ 30.4
U2AF2P26368 IKBKB-228ENST00000523517 2378 ntTSL 1 (best)20.67■□□□□ 0.97e-7■■■■■ 30.4
U2AF2P26368 IKBKB-206ENST00000517890 2501 ntTSL 219.11■□□□□ 0.657e-7■■■■■ 30.4
U2AF2P26368 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.357e-7■■■■■ 30.4
U2AF2P26368 IKBKB-209ENST00000518679 2784 ntTSL 216.92■□□□□ 0.37e-7■■■■■ 30.4
U2AF2P26368 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC15.82■□□□□ 0.127e-7■■■■■ 30.4
U2AF2P26368 IKBKB-201ENST00000342222 3952 ntTSL 214.18□□□□□ -0.147e-7■■■■■ 30.4
U2AF2P26368 IKBKB-214ENST00000520201 5002 ntTSL 214.01□□□□□ -0.177e-7■■■■■ 30.4
U2AF2P26368 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC13.95□□□□□ -0.187e-7■■■■■ 30.4
U2AF2P26368 IKBKB-230ENST00000629753 4069 ntTSL 2 BASIC13.92□□□□□ -0.187e-7■■■■■ 30.4
U2AF2P26368 IKBKB-220ENST00000521661 2196 ntTSL 513.68□□□□□ -0.227e-7■■■■■ 30.4
U2AF2P26368 IKBKB-216ENST00000520655 3777 ntTSL 212.82□□□□□ -0.367e-7■■■■■ 30.4
U2AF2P26368 IKBKB-202ENST00000416505 4036 ntTSL 2 BASIC11.92□□□□□ -0.57e-7■■■■■ 30.4
U2AF2P26368 HMGCR-204ENST00000504466 1107 ntTSL 25.96□□□□□ -1.464e-8■■■■■ 30.4
U2AF2P26368 RALGPS2-206ENST00000477383 671 ntTSL 35.23□□□□□ -1.573e-7■■■■■ 30.3
U2AF2P26368 RALGPS2-202ENST00000367632 438 ntTSL 34.41□□□□□ -1.73e-7■■■■■ 30.3
U2AF2P26368 RALGPS2-208ENST00000480743 684 ntTSL 33.58□□□□□ -1.843e-7■■■■■ 30.3
U2AF2P26368 SNX13-203ENST00000428135 6357 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.694e-6■■■■■ 30.3
U2AF2P26368 SNX13-201ENST00000409076 3818 ntTSL 29.93□□□□□ -0.824e-6■■■■■ 30.3
U2AF2P26368 AC006017.1-201ENST00000424630 673 ntTSL 3 BASIC8.8□□□□□ -14e-6■■■■■ 30.3
U2AF2P26368 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC7.22□□□□□ -1.254e-6■■■■■ 30.3
U2AF2P26368 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC17.03■□□□□ 0.321e-8■■■■■ 30.3
U2AF2P26368 TTLL4-202ENST00000392102 4967 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.441e-8■■■■■ 30.3
U2AF2P26368 TTLL4-201ENST00000258398 4730 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.741e-8■■■■■ 30.3
U2AF2P26368 TTLL4-204ENST00000417196 811 ntTSL 58.67□□□□□ -1.021e-8■■■■■ 30.3
U2AF2P26368 TTLL4-214ENST00000465558 1688 ntTSL 28.61□□□□□ -1.031e-8■■■■■ 30.3
U2AF2P26368 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC8.21□□□□□ -1.091e-8■■■■■ 30.3
U2AF2P26368 TTLL4-207ENST00000434241 476 ntTSL 58.09□□□□□ -1.111e-8■■■■■ 30.3
U2AF2P26368 TTLL4-218ENST00000480472 765 ntTSL 47.84□□□□□ -1.151e-8■■■■■ 30.3
U2AF2P26368 TTLL4-215ENST00000467841 973 ntTSL 47.55□□□□□ -1.21e-8■■■■■ 30.3
U2AF2P26368 CTC1-204ENST00000578441 781 ntTSL 511.07□□□□□ -0.642e-8■■■■■ 30.3
U2AF2P26368 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC16.64■□□□□ 0.252e-6■■■■■ 30.3
U2AF2P26368 NPIPP1-203ENST00000547107 1071 ntBASIC8.82□□□□□ -12e-6■■■■■ 30.3
U2AF2P26368 NKTR-217ENST00000498730 4912 ntTSL 24.28□□□□□ -1.722e-8■■■■■ 30.3
U2AF2P26368 NKTR-210ENST00000466553 716 ntTSL 23.7□□□□□ -1.822e-8■■■■■ 30.3
U2AF2P26368 NKTR-209ENST00000465584 3839 ntTSL 22.76□□□□□ -1.972e-8■■■■■ 30.3
U2AF2P26368 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.316e-7■■■■■ 30.3
U2AF2P26368 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.086e-7■■■■■ 30.3
U2AF2P26368 NIPA1-203ENST00000557930 582 ntTSL 215.31■□□□□ 0.046e-7■■■■■ 30.3
U2AF2P26368 NIPA1-205ENST00000560069 575 ntTSL 413.63□□□□□ -0.236e-7■■■■■ 30.3
U2AF2P26368 NIPA1-204ENST00000559448 2799 ntTSL 212.6□□□□□ -0.396e-7■■■■■ 30.3
U2AF2P26368 MPHOSPH9-218ENST00000545974 1739 ntTSL 410.5□□□□□ -0.731e-7■■■■■ 30.3
U2AF2P26368 FTX-201ENST00000418855 579 ntTSL 29.97□□□□□ -0.812e-6■■■■■ 30.3
U2AF2P26368 FTX-203ENST00000429124 2597 ntTSL 29.96□□□□□ -0.812e-6■■■■■ 30.3
U2AF2P26368 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.976e-7■■■■■ 30.3
U2AF2P26368 FTX-205ENST00000455395 654 ntTSL 36.4□□□□□ -1.382e-6■■■■■ 30.3
U2AF2P26368 MPHOSPH9-213ENST00000541603 856 ntAPPRIS ALT2 TSL 1 (best)4.34□□□□□ -1.711e-7■■■■■ 30.3
U2AF2P26368 MPHOSPH9-223ENST00000606704 553 ntTSL 53.95□□□□□ -1.781e-7■■■■■ 30.3
U2AF2P26368 USP15-213ENST00000549268 1087 ntTSL 53.55□□□□□ -1.843e-7■■■■■ 30.3
U2AF2P26368 ALS2-204ENST00000439495 3242 ntTSL 29.66□□□□□ -0.861e-6■■■■■ 30.3
U2AF2P26368 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.92■□□□□ 0.786e-7■■■■■ 30.3
U2AF2P26368 NCOA2-202ENST00000518287 6087 ntTSL 58.03□□□□□ -1.121e-6■■■■■ 30.2
U2AF2P26368 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.261e-6■■■■■ 30.2
U2AF2P26368 SMOX-208ENST00000484515 900 ntTSL 327.36■■□□□ 1.972e-7■■■■■ 30.2
U2AF2P26368 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC27.27■■□□□ 1.962e-7■■■■■ 30.2
U2AF2P26368 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.912e-7■■■■■ 30.2
U2AF2P26368 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC26.73■■□□□ 1.872e-7■■■■■ 30.2
U2AF2P26368 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC25.08■■□□□ 1.612e-7■■■■■ 30.2
U2AF2P26368 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.82e-7■■■■■ 30.2
U2AF2P26368 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.65■□□□□ 0.742e-7■■■■■ 30.2
U2AF2P26368 SMOX-206ENST00000457205 1669 ntTSL 519.18■□□□□ 0.662e-7■■■■■ 30.2
U2AF2P26368 LINC00862-203ENST00000636153 1186 ntTSL 55.19□□□□□ -1.582e-7■■■■■ 30.2
U2AF2P26368 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.63□□□□□ -1.672e-7■■■■■ 30.2
U2AF2P26368 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.42□□□□□ -1.862e-7■■■■■ 30.2
U2AF2P26368 SHC1-209ENST00000444664 1305 ntTSL 518.87■□□□□ 0.611e-9■■■■■ 30.2
U2AF2P26368 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.511e-9■■■■■ 30.2
Retrieved 100 of 36,523 protein–RNA pairs in 532.4 ms