RNA–Protein interactions for RNA: ENST00000521661.5

IKBKB-220, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 5

Gene IKBKB, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-220ENST00000521661 NISCHQ9Y2I1 1504 aa26.35■■□□□ 1.81
IKBKB-220ENST00000521661 CCDC180Q9P1Z9 1646 aa23.21■■□□□ 1.31
IKBKB-220ENST00000521661 ABCC9O60706 1549 aa22.35■■□□□ 1.17
IKBKB-220ENST00000521661 ZCCHC6Q5VYS8 1495 aaKnown RBP22.03■■□□□ 1.12
IKBKB-220ENST00000521661 DCAF8L2P0C7V8 631 aa21.87■■□□□ 1.09
IKBKB-220ENST00000521661 DCAF1Q9Y4B6 1507 aa21.8■■□□□ 1.08
IKBKB-220ENST00000521661 NACADO15069 1562 aa21.73■■□□□ 1.07
IKBKB-220ENST00000521661 MYO15BQ96JP2 1530 aa21.73■■□□□ 1.07
IKBKB-220ENST00000521661 RB1CC1Q8TDY2 1594 aa21.65■■□□□ 1.06
IKBKB-220ENST00000521661 SHROOM4Q9ULL8 1493 aa21.65■■□□□ 1.06
IKBKB-220ENST00000521661 SCRIBQ14160 1630 aa21.24■□□□□ 0.99
IKBKB-220ENST00000521661 UNC13AQ9UPW8 1703 aa21.2■□□□□ 0.99
IKBKB-220ENST00000521661 BICRAQ9NZM4 1560 aa21.01■□□□□ 0.95
IKBKB-220ENST00000521661 PABPN1Q86U42 306 aaKnown RBP eCLIP20.97■□□□□ 0.95
IKBKB-220ENST00000521661 SUPT5HO00267 1087 aaKnown RBP20.87■□□□□ 0.93
IKBKB-220ENST00000521661 CECR2Q9BXF3 1484 aa20.5■□□□□ 0.87
IKBKB-220ENST00000521661 EIF4G1Q04637 1599 aaKnown RBP20.41■□□□□ 0.86
IKBKB-220ENST00000521661 BAZ1AQ9NRL2 1556 aaPredicted RBP20.38■□□□□ 0.85
IKBKB-220ENST00000521661 SMARCA4P51532 1647 aa20.35■□□□□ 0.85
IKBKB-220ENST00000521661 RSF1Q96T23 1441 aaPredicted RBP20.34■□□□□ 0.85
IKBKB-220ENST00000521661 MROH2BQ7Z745 1585 aa20.33■□□□□ 0.85
IKBKB-220ENST00000521661 CC2D2AQ9P2K1 1620 aa20.23■□□□□ 0.83
IKBKB-220ENST00000521661 DNAJC5BQ9UF47 199 aa20.17■□□□□ 0.82
IKBKB-220ENST00000521661 ATAD2BQ9ULI0 1458 aa20.14■□□□□ 0.81
IKBKB-220ENST00000521661 PEG3Q9GZU2 1588 aa20.14■□□□□ 0.81
IKBKB-220ENST00000521661 WIZO95785 1651 aa20.13■□□□□ 0.81
IKBKB-220ENST00000521661 SMARCA2P51531 1590 aa20.12■□□□□ 0.81
IKBKB-220ENST00000521661 NCAPD3P42695 1498 aa20.06■□□□□ 0.8
IKBKB-220ENST00000521661 BAZ1BQ9UIG0 1483 aaKnown RBP19.99■□□□□ 0.79
IKBKB-220ENST00000521661 HMGXB3Q12766 1538 aa19.99■□□□□ 0.79
IKBKB-220ENST00000521661 CHIC1Q5VXU3 224 aa19.92■□□□□ 0.78
IKBKB-220ENST00000521661 TOP2AP11388 1531 aaKnown RBP19.92■□□□□ 0.78
IKBKB-220ENST00000521661 CCDC88BA6NC98 1476 aa19.71■□□□□ 0.75
IKBKB-220ENST00000521661 TRIM41Q8WV44 630 aa19.53■□□□□ 0.72
IKBKB-220ENST00000521661 CADPSQ9ULU8 1353 aa19.5■□□□□ 0.71
IKBKB-220ENST00000521661 NESP48681 1621 aa19.47■□□□□ 0.71
IKBKB-220ENST00000521661 CFTRP13569 1480 aa19.47■□□□□ 0.71
IKBKB-220ENST00000521661 LAMC3Q9Y6N6 1575 aa19.45■□□□□ 0.7
IKBKB-220ENST00000521661 ABCC8Q09428 1581 aa19.37■□□□□ 0.69
IKBKB-220ENST00000521661 PRDM2Q13029 1718 aa19.35■□□□□ 0.69
IKBKB-220ENST00000521661 FAM9AQ8IZU1 332 aaPredicted RBP19.32■□□□□ 0.68
IKBKB-220ENST00000521661 PDS5BQ9NTI5 1447 aa19.31■□□□□ 0.68
IKBKB-220ENST00000521661 HRCP23327 699 aa19.29■□□□□ 0.68
IKBKB-220ENST00000521661 LOC105371045A0A1W2PR82 267 aa19.28■□□□□ 0.68
IKBKB-220ENST00000521661 FANCD2Q9BXW9 1451 aa19.28■□□□□ 0.68
IKBKB-220ENST00000521661 KIF21AQ7Z4S6 1674 aa19.25■□□□□ 0.67
IKBKB-220ENST00000521661 ERCC6Q03468 1493 aa19.2■□□□□ 0.66
IKBKB-220ENST00000521661 CEP164Q9UPV0 1460 aa19.2■□□□□ 0.66
IKBKB-220ENST00000521661 EHMT2Q96KQ7 1210 aa19.16■□□□□ 0.66
IKBKB-220ENST00000521661 WRNQ14191 1432 aaPredicted RBP eCLIP19.15■□□□□ 0.66
IKBKB-220ENST00000521661 MRC2Q9UBG0 1479 aa19.09■□□□□ 0.65
IKBKB-220ENST00000521661 SYNJ1O43426 1573 aa19.09■□□□□ 0.65
IKBKB-220ENST00000521661 URB2Q14146 1524 aaKnown RBP19.07■□□□□ 0.64
IKBKB-220ENST00000521661 THOC2Q8NI27 1593 aaKnown RBP19.06■□□□□ 0.64
IKBKB-220ENST00000521661 CUX1P39880 1505 aa19.04■□□□□ 0.64
IKBKB-220ENST00000521661 DNMBPQ6XZF7 1577 aa19.02■□□□□ 0.64
IKBKB-220ENST00000521661 TOPBP1Q92547 1522 aa19.02■□□□□ 0.64
IKBKB-220ENST00000521661 SOGA1O94964 1423 aa19.01■□□□□ 0.63
IKBKB-220ENST00000521661 WDR62O43379 1518 aa19.01■□□□□ 0.63
IKBKB-220ENST00000521661 TOP2BQ02880 1626 aa18.98■□□□□ 0.63
IKBKB-220ENST00000521661 BIVM-ERCC5R4GMW8 1640 aa18.97■□□□□ 0.63
IKBKB-220ENST00000521661 RUSC2Q8N2Y8 1516 aa18.96■□□□□ 0.63
IKBKB-220ENST00000521661 FGD5Q6ZNL6 1462 aa18.91■□□□□ 0.62
IKBKB-220ENST00000521661 PCGF6Q9BYE7 350 aa18.91■□□□□ 0.62
IKBKB-220ENST00000521661 POLA1P09884 1462 aaPredicted RBP18.89■□□□□ 0.61
IKBKB-220ENST00000521661 CSRNP3Q8WYN3 585 aa18.86■□□□□ 0.61
IKBKB-220ENST00000521661 CUX2O14529 1486 aa18.85■□□□□ 0.61
IKBKB-220ENST00000521661 EEA1Q15075 1411 aa18.83■□□□□ 0.61
IKBKB-220ENST00000521661 RAD54L2Q9Y4B4 1467 aa18.81■□□□□ 0.6
IKBKB-220ENST00000521661 TARBP1Q13395 1621 aaKnown RBP18.78■□□□□ 0.6
IKBKB-220ENST00000521661 IFT140Q96RY7 1462 aa18.78■□□□□ 0.6
IKBKB-220ENST00000521661 ABCA10Q8WWZ4 1543 aa18.73■□□□□ 0.59
IKBKB-220ENST00000521661 UBTFP17480 764 aaKnown RBP18.72■□□□□ 0.59
IKBKB-220ENST00000521661 WDR97A6NE52 1622 aa18.72■□□□□ 0.59
IKBKB-220ENST00000521661 ZNF608Q9ULD9 1512 aaPredicted RBP18.69■□□□□ 0.58
IKBKB-220ENST00000521661 TDRD9Q8NDG6 1382 aaKnown RBP18.68■□□□□ 0.58
IKBKB-220ENST00000521661 PPARGC1BQ86YN6 1023 aaKnown RBP18.66■□□□□ 0.58
IKBKB-220ENST00000521661 GOLGA3Q08378 1498 aa18.66■□□□□ 0.58
IKBKB-220ENST00000521661 KIF27Q86VH2 1401 aa18.65■□□□□ 0.58
IKBKB-220ENST00000521661 AQRO60306 1485 aaKnown RBP eCLIP18.64■□□□□ 0.576e-6■■■■□ 25.1
IKBKB-220ENST00000521661 ABCA5Q8WWZ7 1642 aa18.62■□□□□ 0.57
IKBKB-220ENST00000521661 KIF21BO75037 1637 aa18.61■□□□□ 0.57
IKBKB-220ENST00000521661 TNIKQ9UKE5 1360 aa18.61■□□□□ 0.57
IKBKB-220ENST00000521661 EIF4G3O43432 1585 aaKnown RBP18.61■□□□□ 0.57
IKBKB-220ENST00000521661 GAPVD1Q14C86 1478 aa18.61■□□□□ 0.57
IKBKB-220ENST00000521661 RAPGEF2Q9Y4G8 1499 aa18.6■□□□□ 0.57
IKBKB-220ENST00000521661 CEP162Q5TB80 1403 aa18.58■□□□□ 0.56
IKBKB-220ENST00000521661 TRIM26Q12899 539 aaPredicted RBP18.56■□□□□ 0.56
IKBKB-220ENST00000521661 RANGAP1P46060 587 aaPredicted RBP18.54■□□□□ 0.56
IKBKB-220ENST00000521661 GRIN2BQ13224 1484 aa18.54■□□□□ 0.56
IKBKB-220ENST00000521661 PBRM1Q86U86 1689 aa18.54■□□□□ 0.56
IKBKB-220ENST00000521661 IGF1RP08069 1367 aa18.53■□□□□ 0.56
IKBKB-220ENST00000521661 ERICH3Q5RHP9 1530 aa18.51■□□□□ 0.55
IKBKB-220ENST00000521661 PRXQ9BXM0 1461 aa18.51■□□□□ 0.55
IKBKB-220ENST00000521661 SNAPC4Q5SXM2 1469 aa18.46■□□□□ 0.55
IKBKB-220ENST00000521661 MAGI1Q96QZ7 1491 aaPredicted RBP18.44■□□□□ 0.54
IKBKB-220ENST00000521661 CUL7Q14999 1698 aa18.42■□□□□ 0.54
IKBKB-220ENST00000521661 CARMIL1Q5VZK9 1371 aa18.42■□□□□ 0.54
IKBKB-220ENST00000521661 ADAMTS12P58397 1594 aa18.41■□□□□ 0.54
IKBKB-220ENST00000521661 CLIP1P30622 1438 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms