RNA–Protein interactions for RNA: ENST00000418855.5

FTX-201, Transcript of FTX transcript, XIST regulator, humanhuman

TSL 2

Gene FTX, Length 579 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FTX-201ENST00000418855 NISCHQ9Y2I1 1504 aa22.18■■□□□ 1.14
FTX-201ENST00000418855 CCDC180Q9P1Z9 1646 aa19.87■□□□□ 0.77
FTX-201ENST00000418855 ABCC9O60706 1549 aa19.51■□□□□ 0.71
FTX-201ENST00000418855 RB1CC1Q8TDY2 1594 aa18.76■□□□□ 0.59
FTX-201ENST00000418855 NACADO15069 1562 aa18.71■□□□□ 0.59
FTX-201ENST00000418855 MYO15BQ96JP2 1530 aa18.58■□□□□ 0.56
FTX-201ENST00000418855 ZCCHC6Q5VYS8 1495 aaKnown RBP18.46■□□□□ 0.54
FTX-201ENST00000418855 DCAF8L2P0C7V8 631 aa18.45■□□□□ 0.54
FTX-201ENST00000418855 DCAF1Q9Y4B6 1507 aa18.41■□□□□ 0.54
FTX-201ENST00000418855 UNC13AQ9UPW8 1703 aa18.35■□□□□ 0.53
FTX-201ENST00000418855 BICRAQ9NZM4 1560 aa18.2■□□□□ 0.5
FTX-201ENST00000418855 PABPN1Q86U42 306 aaKnown RBP eCLIP18.15■□□□□ 0.5
FTX-201ENST00000418855 SHROOM4Q9ULL8 1493 aa18.07■□□□□ 0.48
FTX-201ENST00000418855 DNAJC5BQ9UF47 199 aa18.07■□□□□ 0.48
FTX-201ENST00000418855 SCRIBQ14160 1630 aa18.01■□□□□ 0.47
FTX-201ENST00000418855 EIF4G1Q04637 1599 aaKnown RBP17.73■□□□□ 0.43
FTX-201ENST00000418855 CC2D2AQ9P2K1 1620 aa17.69■□□□□ 0.42
FTX-201ENST00000418855 CECR2Q9BXF3 1484 aa17.59■□□□□ 0.41
FTX-201ENST00000418855 SMARCA4P51532 1647 aa17.26■□□□□ 0.35
FTX-201ENST00000418855 NCAPD3P42695 1498 aa17.25■□□□□ 0.35
FTX-201ENST00000418855 BAZ1AQ9NRL2 1556 aaPredicted RBP17.23■□□□□ 0.35
FTX-201ENST00000418855 SMARCA2P51531 1590 aa17.2■□□□□ 0.34
FTX-201ENST00000418855 ATAD2BQ9ULI0 1458 aa17.2■□□□□ 0.34
FTX-201ENST00000418855 HMGXB3Q12766 1538 aa17.17■□□□□ 0.34
FTX-201ENST00000418855 PEG3Q9GZU2 1588 aa17.15■□□□□ 0.34
FTX-201ENST00000418855 MROH2BQ7Z745 1585 aa17.06■□□□□ 0.32
FTX-201ENST00000418855 BAZ1BQ9UIG0 1483 aaKnown RBP17.05■□□□□ 0.32
FTX-201ENST00000418855 WIZO95785 1651 aa16.87■□□□□ 0.29
FTX-201ENST00000418855 ERCC6Q03468 1493 aa16.86■□□□□ 0.29
FTX-201ENST00000418855 LAMC3Q9Y6N6 1575 aa16.84■□□□□ 0.29
FTX-201ENST00000418855 NESP48681 1621 aa16.84■□□□□ 0.29
FTX-201ENST00000418855 CUX2O14529 1486 aa16.82■□□□□ 0.28
FTX-201ENST00000418855 RSF1Q96T23 1441 aaPredicted RBP16.8■□□□□ 0.28
FTX-201ENST00000418855 TOP2AP11388 1531 aaKnown RBP16.71■□□□□ 0.27
FTX-201ENST00000418855 CADPSQ9ULU8 1353 aa16.71■□□□□ 0.27
FTX-201ENST00000418855 PDS5BQ9NTI5 1447 aa16.7■□□□□ 0.26
FTX-201ENST00000418855 THOC2Q8NI27 1593 aaKnown RBP16.69■□□□□ 0.26
FTX-201ENST00000418855 KIF21AQ7Z4S6 1674 aa16.68■□□□□ 0.26
FTX-201ENST00000418855 CFTRP13569 1480 aa16.59■□□□□ 0.25
FTX-201ENST00000418855 MRC2Q9UBG0 1479 aa16.54■□□□□ 0.24
FTX-201ENST00000418855 WDR62O43379 1518 aa16.52■□□□□ 0.24
FTX-201ENST00000418855 CEP164Q9UPV0 1460 aa16.52■□□□□ 0.23
FTX-201ENST00000418855 FANCD2Q9BXW9 1451 aa16.51■□□□□ 0.23
FTX-201ENST00000418855 PRDM2Q13029 1718 aa16.5■□□□□ 0.23
FTX-201ENST00000418855 DNAJC5Q9H3Z4 198 aa16.49■□□□□ 0.23
FTX-201ENST00000418855 CCDC88BA6NC98 1476 aa16.48■□□□□ 0.23
FTX-201ENST00000418855 URB2Q14146 1524 aaKnown RBP16.36■□□□□ 0.21
FTX-201ENST00000418855 ABCC8Q09428 1581 aa16.26■□□□□ 0.19
FTX-201ENST00000418855 TOPBP1Q92547 1522 aa16.23■□□□□ 0.19
FTX-201ENST00000418855 DNMBPQ6XZF7 1577 aa16.21■□□□□ 0.19
FTX-201ENST00000418855 IFT140Q96RY7 1462 aa16.19■□□□□ 0.18
FTX-201ENST00000418855 SUPT5HO00267 1087 aaKnown RBP16.1■□□□□ 0.17
FTX-201ENST00000418855 ZNF608Q9ULD9 1512 aaPredicted RBP16.09■□□□□ 0.17
FTX-201ENST00000418855 TARBP1Q13395 1621 aaKnown RBP16.09■□□□□ 0.17
FTX-201ENST00000418855 POLA1P09884 1462 aaPredicted RBP16.09■□□□□ 0.17
FTX-201ENST00000418855 EIF4G3O43432 1585 aaKnown RBP16.07■□□□□ 0.16
FTX-201ENST00000418855 CUX1P39880 1505 aa16.03■□□□□ 0.16
FTX-201ENST00000418855 OSCARQ8IYS5 282 aa16.02■□□□□ 0.16
FTX-201ENST00000418855 WDR97A6NE52 1622 aa16.01■□□□□ 0.15
FTX-201ENST00000418855 FGD5Q6ZNL6 1462 aa16■□□□□ 0.15
FTX-201ENST00000418855 SOGA1O94964 1423 aa15.98■□□□□ 0.15
FTX-201ENST00000418855 AQRO60306 1485 aaKnown RBP eCLIP15.97■□□□□ 0.15
FTX-201ENST00000418855 RAD54L2Q9Y4B4 1467 aa15.97■□□□□ 0.15
FTX-201ENST00000418855 CHD1O14646 1710 aa15.91■□□□□ 0.14
FTX-201ENST00000418855 TDRD9Q8NDG6 1382 aaKnown RBP15.89■□□□□ 0.13
FTX-201ENST00000418855 BIVM-ERCC5R4GMW8 1640 aa15.87■□□□□ 0.13
FTX-201ENST00000418855 ABCA10Q8WWZ4 1543 aa15.87■□□□□ 0.13
FTX-201ENST00000418855 TOP2BQ02880 1626 aa15.86■□□□□ 0.13
FTX-201ENST00000418855 GRIN2BQ13224 1484 aa15.85■□□□□ 0.13
FTX-201ENST00000418855 MAGI1Q96QZ7 1491 aaPredicted RBP15.85■□□□□ 0.13
FTX-201ENST00000418855 WRNQ14191 1432 aaPredicted RBP eCLIP15.85■□□□□ 0.13
FTX-201ENST00000418855 SNAPC4Q5SXM2 1469 aa15.84■□□□□ 0.13
FTX-201ENST00000418855 ABCA5Q8WWZ7 1642 aa15.83■□□□□ 0.13
FTX-201ENST00000418855 PBRM1Q86U86 1689 aa15.83■□□□□ 0.12
FTX-201ENST00000418855 GAPVD1Q14C86 1478 aa15.82■□□□□ 0.12
FTX-201ENST00000418855 SYNJ1O43426 1573 aa15.82■□□□□ 0.12
FTX-201ENST00000418855 RIMBP3CA6NJZ7 1639 aa15.81■□□□□ 0.12
FTX-201ENST00000418855 RIMBP3BA6NNM3 1639 aa15.81■□□□□ 0.12
FTX-201ENST00000418855 RIMBP3Q9UFD9 1639 aa15.81■□□□□ 0.12
FTX-201ENST00000418855 ARHGEF11O15085 1522 aa15.79■□□□□ 0.12
FTX-201ENST00000418855 SYNJ2O15056 1496 aa15.78■□□□□ 0.12
FTX-201ENST00000418855 FBLN2P98095 1184 aa15.76■□□□□ 0.11
FTX-201ENST00000418855 TRIM41Q8WV44 630 aa15.76■□□□□ 0.11
FTX-201ENST00000418855 CLASP1Q7Z460 1538 aa15.74■□□□□ 0.11
FTX-201ENST00000418855 CHMP7Q8WUX9 453 aaPredicted RBP15.73■□□□□ 0.11
FTX-201ENST00000418855 ERICH3Q5RHP9 1530 aa15.69■□□□□ 0.1
FTX-201ENST00000418855 ADAMTS12P58397 1594 aa15.69■□□□□ 0.1
FTX-201ENST00000418855 GRIN2AQ12879 1464 aa15.65■□□□□ 0.1
FTX-201ENST00000418855 ARAP1Q96P48 1450 aa15.65■□□□□ 0.1
FTX-201ENST00000418855 FHAD1B1AJZ9 1412 aa15.64■□□□□ 0.09
FTX-201ENST00000418855 NUP160Q12769 1436 aa15.6■□□□□ 0.09
FTX-201ENST00000418855 CYB5RLQ6IPT4 315 aa15.58■□□□□ 0.08
FTX-201ENST00000418855 CEP170Q5SW79 1584 aa15.58■□□□□ 0.08
FTX-201ENST00000418855 SHROOM2Q13796 1616 aa15.54■□□□□ 0.08
FTX-201ENST00000418855 KIF27Q86VH2 1401 aa15.53■□□□□ 0.08
FTX-201ENST00000418855 CUL7Q14999 1698 aa15.51■□□□□ 0.07
FTX-201ENST00000418855 IGF1RP08069 1367 aa15.48■□□□□ 0.07
FTX-201ENST00000418855 RUSC2Q8N2Y8 1516 aa15.46■□□□□ 0.07
FTX-201ENST00000418855 ERCC6L2Q5T890 1561 aa15.45■□□□□ 0.06
FTX-201ENST00000418855 KIAA0586Q9BVV6 1533 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms