RNA–Protein interactions for RNA: ENST00000493653.1

PDS5B-208, Transcript of PDS5 cohesin associated factor B, humanhuman

TSL 1 (best)

Gene PDS5B, Length 972 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5B-208ENST00000493653 NISCHQ9Y2I1 1504 aa29.5■■■□□ 2.31
PDS5B-208ENST00000493653 CCDC180Q9P1Z9 1646 aa26.5■■□□□ 1.83
PDS5B-208ENST00000493653 ABCC9O60706 1549 aa26.35■■□□□ 1.81
PDS5B-208ENST00000493653 AEBP2Q6ZN18 517 aaPredicted RBP26.28■■□□□ 1.8
PDS5B-208ENST00000493653 RB1CC1Q8TDY2 1594 aa25.14■■□□□ 1.62
PDS5B-208ENST00000493653 NACADO15069 1562 aa24.97■■□□□ 1.59
PDS5B-208ENST00000493653 DCAF8L2P0C7V8 631 aa24.77■■□□□ 1.56
PDS5B-208ENST00000493653 MYO15BQ96JP2 1530 aa24.64■■□□□ 1.53
PDS5B-208ENST00000493653 UNC13AQ9UPW8 1703 aa24.6■■□□□ 1.53
PDS5B-208ENST00000493653 CHIC1Q5VXU3 224 aa24.59■■□□□ 1.53
PDS5B-208ENST00000493653 ZCCHC6Q5VYS8 1495 aaKnown RBP24.53■■□□□ 1.52
PDS5B-208ENST00000493653 DNAJC5BQ9UF47 199 aa24.49■■□□□ 1.51
PDS5B-208ENST00000493653 PABPN1Q86U42 306 aaKnown RBP eCLIP24.48■■□□□ 1.51
PDS5B-208ENST00000493653 BICRAQ9NZM4 1560 aa24.4■■□□□ 1.5
PDS5B-208ENST00000493653 DCAF1Q9Y4B6 1507 aa24.38■■□□□ 1.49
PDS5B-208ENST00000493653 SCRIBQ14160 1630 aa24.18■■□□□ 1.46
PDS5B-208ENST00000493653 SHROOM4Q9ULL8 1493 aa24.1■■□□□ 1.45
PDS5B-208ENST00000493653 CC2D2AQ9P2K1 1620 aa23.82■■□□□ 1.4
PDS5B-208ENST00000493653 EIF4G1Q04637 1599 aaKnown RBP23.81■■□□□ 1.4
PDS5B-208ENST00000493653 CECR2Q9BXF3 1484 aa23.72■■□□□ 1.39
PDS5B-208ENST00000493653 SMARCA4P51532 1647 aa23.05■■□□□ 1.28
PDS5B-208ENST00000493653 NCAPD3P42695 1498 aa23■■□□□ 1.27
PDS5B-208ENST00000493653 ATAD2BQ9ULI0 1458 aa22.98■■□□□ 1.27
PDS5B-208ENST00000493653 SMARCA2P51531 1590 aa22.96■■□□□ 1.27
PDS5B-208ENST00000493653 HMGXB3Q12766 1538 aa22.93■■□□□ 1.26
PDS5B-208ENST00000493653 BAZ1AQ9NRL2 1556 aaPredicted RBP22.93■■□□□ 1.26
PDS5B-208ENST00000493653 BAZ1BQ9UIG0 1483 aaKnown RBP22.81■■□□□ 1.24
PDS5B-208ENST00000493653 PEG3Q9GZU2 1588 aa22.79■■□□□ 1.24
PDS5B-208ENST00000493653 ERCC6Q03468 1493 aa22.77■■□□□ 1.24
PDS5B-208ENST00000493653 MROH2BQ7Z745 1585 aa22.76■■□□□ 1.23
PDS5B-208ENST00000493653 NESP48681 1621 aa22.67■■□□□ 1.22
PDS5B-208ENST00000493653 CUX2O14529 1486 aa22.66■■□□□ 1.22
PDS5B-208ENST00000493653 LAMC3Q9Y6N6 1575 aa22.53■■□□□ 1.2
PDS5B-208ENST00000493653 WIZO95785 1651 aa22.51■■□□□ 1.19
PDS5B-208ENST00000493653 THOC2Q8NI27 1593 aaKnown RBP22.48■■□□□ 1.19
PDS5B-208ENST00000493653 SENP3Q9H4L4 574 aaPredicted RBP22.48■■□□□ 1.19
PDS5B-208ENST00000493653 KIF21AQ7Z4S6 1674 aa22.43■■□□□ 1.18
PDS5B-208ENST00000493653 DNAJC5Q9H3Z4 198 aa22.39■■□□□ 1.17
PDS5B-208ENST00000493653 PDS5BQ9NTI5 1447 aa22.36■■□□□ 1.17
PDS5B-208ENST00000493653 CADPSQ9ULU8 1353 aa22.31■■□□□ 1.16
PDS5B-208ENST00000493653 RSF1Q96T23 1441 aaPredicted RBP22.29■■□□□ 1.16
PDS5B-208ENST00000493653 TOP2AP11388 1531 aaKnown RBP22.25■■□□□ 1.15
PDS5B-208ENST00000493653 MRC2Q9UBG0 1479 aa22.22■■□□□ 1.15
PDS5B-208ENST00000493653 WDR62O43379 1518 aa22.17■■□□□ 1.14
PDS5B-208ENST00000493653 CEP164Q9UPV0 1460 aa22.15■■□□□ 1.14
PDS5B-208ENST00000493653 CFTRP13569 1480 aa22.11■■□□□ 1.13
PDS5B-208ENST00000493653 FANCD2Q9BXW9 1451 aa22.11■■□□□ 1.13
PDS5B-208ENST00000493653 PHF23Q9BUL5 403 aaPredicted RBP22.06■■□□□ 1.12
PDS5B-208ENST00000493653 PRDM2Q13029 1718 aa22■■□□□ 1.11
PDS5B-208ENST00000493653 CCDC88BA6NC98 1476 aa21.93■■□□□ 1.1
PDS5B-208ENST00000493653 URB2Q14146 1524 aaKnown RBP21.93■■□□□ 1.1
PDS5B-208ENST00000493653 TOPBP1Q92547 1522 aa21.71■■□□□ 1.07
PDS5B-208ENST00000493653 DNMBPQ6XZF7 1577 aa21.67■■□□□ 1.06
PDS5B-208ENST00000493653 IFT140Q96RY7 1462 aa21.67■■□□□ 1.06
PDS5B-208ENST00000493653 ZNF608Q9ULD9 1512 aaPredicted RBP21.64■■□□□ 1.05
PDS5B-208ENST00000493653 ABCC8Q09428 1581 aa21.61■■□□□ 1.05
PDS5B-208ENST00000493653 EIF4G3O43432 1585 aaKnown RBP21.6■■□□□ 1.05
PDS5B-208ENST00000493653 TRIM41Q8WV44 630 aa21.54■■□□□ 1.04
PDS5B-208ENST00000493653 OSCARQ8IYS5 282 aa21.53■■□□□ 1.04
PDS5B-208ENST00000493653 TARBP1Q13395 1621 aaKnown RBP21.52■■□□□ 1.04
PDS5B-208ENST00000493653 POLA1P09884 1462 aaPredicted RBP21.51■■□□□ 1.03
PDS5B-208ENST00000493653 AQRO60306 1485 aaKnown RBP eCLIP21.42■■□□□ 1.02
PDS5B-208ENST00000493653 RAD54L2Q9Y4B4 1467 aa21.4■■□□□ 1.02
PDS5B-208ENST00000493653 CHD1O14646 1710 aa21.4■■□□□ 1.02
PDS5B-208ENST00000493653 CUX1P39880 1505 aa21.39■■□□□ 1.02
PDS5B-208ENST00000493653 FGD5Q6ZNL6 1462 aa21.39■■□□□ 1.02
PDS5B-208ENST00000493653 RIMBP3CA6NJZ7 1639 aa21.38■■□□□ 1.01
PDS5B-208ENST00000493653 RIMBP3BA6NNM3 1639 aa21.38■■□□□ 1.01
PDS5B-208ENST00000493653 RIMBP3Q9UFD9 1639 aa21.38■■□□□ 1.01
PDS5B-208ENST00000493653 SUPT5HO00267 1087 aaKnown RBP21.35■■□□□ 1.01
PDS5B-208ENST00000493653 SOGA1O94964 1423 aa21.34■■□□□ 1.01
PDS5B-208ENST00000493653 ARHGEF11O15085 1522 aa21.33■■□□□ 1
PDS5B-208ENST00000493653 WDR97A6NE52 1622 aa21.33■■□□□ 1
PDS5B-208ENST00000493653 TDRD9Q8NDG6 1382 aaKnown RBP21.29■■□□□ 1
PDS5B-208ENST00000493653 SNAPC4Q5SXM2 1469 aa21.27■■□□□ 1
PDS5B-208ENST00000493653 FBLN2P98095 1184 aa21.23■□□□□ 0.99
PDS5B-208ENST00000493653 PBRM1Q86U86 1689 aa21.2■□□□□ 0.98
PDS5B-208ENST00000493653 MAGI1Q96QZ7 1491 aaPredicted RBP21.2■□□□□ 0.98
PDS5B-208ENST00000493653 GRIN2BQ13224 1484 aa21.19■□□□□ 0.98
PDS5B-208ENST00000493653 ABCA5Q8WWZ7 1642 aa21.15■□□□□ 0.98
PDS5B-208ENST00000493653 CLASP1Q7Z460 1538 aa21.14■□□□□ 0.97
PDS5B-208ENST00000493653 ABCA10Q8WWZ4 1543 aa21.14■□□□□ 0.97
PDS5B-208ENST00000493653 SYNJ1O43426 1573 aa21.13■□□□□ 0.97
PDS5B-208ENST00000493653 GAPVD1Q14C86 1478 aa21.13■□□□□ 0.97
PDS5B-208ENST00000493653 ARAP1Q96P48 1450 aa21.13■□□□□ 0.97
PDS5B-208ENST00000493653 SYNJ2O15056 1496 aa21.12■□□□□ 0.97
PDS5B-208ENST00000493653 BIVM-ERCC5R4GMW8 1640 aa21.1■□□□□ 0.97
PDS5B-208ENST00000493653 TOP2BQ02880 1626 aa21.08■□□□□ 0.97
PDS5B-208ENST00000493653 FOXD1Q16676 465 aa21.07■□□□□ 0.96
PDS5B-208ENST00000493653 CHMP7Q8WUX9 453 aaPredicted RBP21.07■□□□□ 0.96
PDS5B-208ENST00000493653 WRNQ14191 1432 aaPredicted RBP eCLIP21.05■□□□□ 0.96
PDS5B-208ENST00000493653 CYB5RLQ6IPT4 315 aa21.04■□□□□ 0.96
PDS5B-208ENST00000493653 ADAMTS12P58397 1594 aa21.01■□□□□ 0.95
PDS5B-208ENST00000493653 GRIN2AQ12879 1464 aa20.94■□□□□ 0.94
PDS5B-208ENST00000493653 CEP170Q5SW79 1584 aa20.89■□□□□ 0.93
PDS5B-208ENST00000493653 ERICH3Q5RHP9 1530 aa20.88■□□□□ 0.93
PDS5B-208ENST00000493653 POTEDQ86YR6 584 aa20.86■□□□□ 0.93
PDS5B-208ENST00000493653 FHAD1B1AJZ9 1412 aa20.86■□□□□ 0.93
PDS5B-208ENST00000493653 NUP160Q12769 1436 aa20.85■□□□□ 0.93
PDS5B-208ENST00000493653 ERCC6L2Q5T890 1561 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms