RNA–Protein interactions for RNA: ENST00000520655.5

IKBKB-216, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 2

Gene IKBKB, Length 3,777 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-216ENST00000520655 NISCHQ9Y2I1 1504 aa23.97■■□□□ 1.43
IKBKB-216ENST00000520655 DCAF8L2P0C7V8 631 aa21.91■■□□□ 1.1
IKBKB-216ENST00000520655 SHROOM4Q9ULL8 1493 aa21.07■□□□□ 0.96
IKBKB-216ENST00000520655 ABCC9O60706 1549 aa20.67■□□□□ 0.9
IKBKB-216ENST00000520655 SUPT5HO00267 1087 aaKnown RBP20.45■□□□□ 0.86
IKBKB-216ENST00000520655 CCDC180Q9P1Z9 1646 aa20.27■□□□□ 0.84
IKBKB-216ENST00000520655 PABPN1Q86U42 306 aaKnown RBP eCLIP19.97■□□□□ 0.79
IKBKB-216ENST00000520655 ZCCHC6Q5VYS8 1495 aaKnown RBP19.95■□□□□ 0.78
IKBKB-216ENST00000520655 SCRIBQ14160 1630 aa19.66■□□□□ 0.74
IKBKB-216ENST00000520655 EHMT2Q96KQ7 1210 aa19.39■□□□□ 0.69
IKBKB-216ENST00000520655 RB1CC1Q8TDY2 1594 aa19.33■□□□□ 0.69
IKBKB-216ENST00000520655 NACADO15069 1562 aa19.28■□□□□ 0.68
IKBKB-216ENST00000520655 DCAF1Q9Y4B6 1507 aa19.18■□□□□ 0.66
IKBKB-216ENST00000520655 FAM9AQ8IZU1 332 aaPredicted RBP19.13■□□□□ 0.65
IKBKB-216ENST00000520655 CECR2Q9BXF3 1484 aa19.04■□□□□ 0.64
IKBKB-216ENST00000520655 TRIM41Q8WV44 630 aa18.87■□□□□ 0.61
IKBKB-216ENST00000520655 MYO15BQ96JP2 1530 aa18.85■□□□□ 0.61
IKBKB-216ENST00000520655 RSF1Q96T23 1441 aaPredicted RBP18.84■□□□□ 0.61
IKBKB-216ENST00000520655 CHIC1Q5VXU3 224 aa18.8■□□□□ 0.6
IKBKB-216ENST00000520655 MROH2BQ7Z745 1585 aa18.73■□□□□ 0.59
IKBKB-216ENST00000520655 RANGAP1P46060 587 aaPredicted RBP18.69■□□□□ 0.58
IKBKB-216ENST00000520655 LOC105371045A0A1W2PR82 267 aa18.59■□□□□ 0.57
IKBKB-216ENST00000520655 WIZO95785 1651 aa18.53■□□□□ 0.56
IKBKB-216ENST00000520655 BAZ1AQ9NRL2 1556 aaPredicted RBP18.52■□□□□ 0.56
IKBKB-216ENST00000520655 BICRAQ9NZM4 1560 aa18.49■□□□□ 0.55
IKBKB-216ENST00000520655 UNC13AQ9UPW8 1703 aa18.47■□□□□ 0.55
IKBKB-216ENST00000520655 TTBK1Q5TCY1 1321 aaPredicted RBP18.46■□□□□ 0.55
IKBKB-216ENST00000520655 BAZ1BQ9UIG0 1483 aaKnown RBP18.43■□□□□ 0.54
IKBKB-216ENST00000520655 DNAJC5BQ9UF47 199 aa18.41■□□□□ 0.54
IKBKB-216ENST00000520655 UBTFP17480 764 aaKnown RBP18.35■□□□□ 0.53
IKBKB-216ENST00000520655 SMARCA4P51532 1647 aa18.34■□□□□ 0.53
IKBKB-216ENST00000520655 ATAD2BQ9ULI0 1458 aa18.29■□□□□ 0.52
IKBKB-216ENST00000520655 PPARGC1BQ86YN6 1023 aaKnown RBP18.29■□□□□ 0.52
IKBKB-216ENST00000520655 CCDC88BA6NC98 1476 aa18.26■□□□□ 0.51
IKBKB-216ENST00000520655 EIF4G1Q04637 1599 aaKnown RBP18.24■□□□□ 0.51
IKBKB-216ENST00000520655 SMARCA2P51531 1590 aa18.12■□□□□ 0.49
IKBKB-216ENST00000520655 ATP1B4Q9UN42 357 aaPredicted RBP18.11■□□□□ 0.49
IKBKB-216ENST00000520655 TOP2AP11388 1531 aaKnown RBP18.09■□□□□ 0.49
IKBKB-216ENST00000520655 ABCC8Q09428 1581 aa18.08■□□□□ 0.49
IKBKB-216ENST00000520655 CC2D2AQ9P2K1 1620 aa18.06■□□□□ 0.48
IKBKB-216ENST00000520655 FBLN2P98095 1184 aa18.02■□□□□ 0.47
IKBKB-216ENST00000520655 WRNQ14191 1432 aaPredicted RBP eCLIP17.95■□□□□ 0.46
IKBKB-216ENST00000520655 CSRNP3Q8WYN3 585 aa17.95■□□□□ 0.46
IKBKB-216ENST00000520655 NCAPD3P42695 1498 aa17.94■□□□□ 0.46
IKBKB-216ENST00000520655 PCGF6Q9BYE7 350 aa17.93■□□□□ 0.46
IKBKB-216ENST00000520655 NESP48681 1621 aa17.92■□□□□ 0.46
IKBKB-216ENST00000520655 P3H3Q8IVL6 736 aa17.89■□□□□ 0.45
IKBKB-216ENST00000520655 CADPSQ9ULU8 1353 aa17.88■□□□□ 0.45
IKBKB-216ENST00000520655 APLP2Q06481 763 aa17.87■□□□□ 0.45
IKBKB-216ENST00000520655 SOGA1O94964 1423 aa17.86■□□□□ 0.45
IKBKB-216ENST00000520655 ERCC6Q03468 1493 aa17.83■□□□□ 0.45
IKBKB-216ENST00000520655 ARID3CA6NKF2 412 aa17.78■□□□□ 0.44
IKBKB-216ENST00000520655 RUSC2Q8N2Y8 1516 aa17.74■□□□□ 0.43
IKBKB-216ENST00000520655 TDRD9Q8NDG6 1382 aaKnown RBP17.7■□□□□ 0.42
IKBKB-216ENST00000520655 FANCD2Q9BXW9 1451 aa17.7■□□□□ 0.42
IKBKB-216ENST00000520655 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.67■□□□□ 0.42
IKBKB-216ENST00000520655 HNRNPUL2Q1KMD3 747 aaKnown RBP17.67■□□□□ 0.42
IKBKB-216ENST00000520655 HMGXB3Q12766 1538 aa17.67■□□□□ 0.42
IKBKB-216ENST00000520655 PDS5BQ9NTI5 1447 aa17.65■□□□□ 0.42
IKBKB-216ENST00000520655 CUX2O14529 1486 aa17.63■□□□□ 0.41
IKBKB-216ENST00000520655 PEG3Q9GZU2 1588 aa17.61■□□□□ 0.41
IKBKB-216ENST00000520655 HRCP23327 699 aa17.6■□□□□ 0.41
IKBKB-216ENST00000520655 CFTRP13569 1480 aa17.6■□□□□ 0.41
IKBKB-216ENST00000520655 ITGAEP38570 1179 aa17.59■□□□□ 0.41
IKBKB-216ENST00000520655 CEP164Q9UPV0 1460 aa17.58■□□□□ 0.41
IKBKB-216ENST00000520655 RAD54L2Q9Y4B4 1467 aa17.57■□□□□ 0.4
IKBKB-216ENST00000520655 CHMP7Q8WUX9 453 aaPredicted RBP17.55■□□□□ 0.4
IKBKB-216ENST00000520655 KIF27Q86VH2 1401 aa17.53■□□□□ 0.4
IKBKB-216ENST00000520655 SYNJ1O43426 1573 aa17.52■□□□□ 0.4
IKBKB-216ENST00000520655 FGD5Q6ZNL6 1462 aa17.48■□□□□ 0.39
IKBKB-216ENST00000520655 CUX1P39880 1505 aa17.44■□□□□ 0.38
IKBKB-216ENST00000520655 CARMIL1Q5VZK9 1371 aa17.43■□□□□ 0.38
IKBKB-216ENST00000520655 AQRO60306 1485 aaKnown RBP eCLIP17.4■□□□□ 0.386e-6■■■■□ 25.1
IKBKB-216ENST00000520655 CEP162Q5TB80 1403 aa17.38■□□□□ 0.37
IKBKB-216ENST00000520655 RAPGEF2Q9Y4G8 1499 aa17.37■□□□□ 0.37
IKBKB-216ENST00000520655 GOLGA3Q08378 1498 aa17.37■□□□□ 0.37
IKBKB-216ENST00000520655 TRIM26Q12899 539 aaPredicted RBP17.36■□□□□ 0.37
IKBKB-216ENST00000520655 CLIP1P30622 1438 aa17.36■□□□□ 0.37
IKBKB-216ENST00000520655 TOPBP1Q92547 1522 aa17.34■□□□□ 0.37
IKBKB-216ENST00000520655 EEA1Q15075 1411 aa17.33■□□□□ 0.37
IKBKB-216ENST00000520655 POLA1P09884 1462 aaPredicted RBP17.3■□□□□ 0.36
IKBKB-216ENST00000520655 IGF1RP08069 1367 aa17.29■□□□□ 0.36
IKBKB-216ENST00000520655 PELP1Q8IZL8 1130 aaKnown RBP17.29■□□□□ 0.36
IKBKB-216ENST00000520655 URB2Q14146 1524 aaKnown RBP17.28■□□□□ 0.36
IKBKB-216ENST00000520655 FAM50AQ14320 339 aaKnown RBP17.28■□□□□ 0.36
IKBKB-216ENST00000520655 TNIKQ9UKE5 1360 aa17.26■□□□□ 0.35
IKBKB-216ENST00000520655 LAMC3Q9Y6N6 1575 aa17.25■□□□□ 0.35
IKBKB-216ENST00000520655 CCER1Q8TC90 406 aaPredicted RBP17.24■□□□□ 0.35
IKBKB-216ENST00000520655 TOP2BQ02880 1626 aa17.23■□□□□ 0.35
IKBKB-216ENST00000520655 MRC2Q9UBG0 1479 aa17.22■□□□□ 0.35
IKBKB-216ENST00000520655 GAPVD1Q14C86 1478 aa17.21■□□□□ 0.35
IKBKB-216ENST00000520655 ZNF608Q9ULD9 1512 aaPredicted RBP17.17■□□□□ 0.34
IKBKB-216ENST00000520655 ZNF777Q9ULD5 760 aaPredicted RBP17.14■□□□□ 0.34
IKBKB-216ENST00000520655 DNMBPQ6XZF7 1577 aa17.14■□□□□ 0.33
IKBKB-216ENST00000520655 MYT1LQ9UL68 1186 aa17.14■□□□□ 0.33
IKBKB-216ENST00000520655 KIF21AQ7Z4S6 1674 aa17.14■□□□□ 0.33
IKBKB-216ENST00000520655 FHOD3Q2V2M9 1422 aa17.1■□□□□ 0.33
IKBKB-216ENST00000520655 KANK4Q5T7N3 995 aaPredicted RBP17.1■□□□□ 0.33
IKBKB-216ENST00000520655 KCNH8Q96L42 1107 aa17.09■□□□□ 0.33
IKBKB-216ENST00000520655 JPH4Q96JJ6 628 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms