RNA–Protein interactions for RNA: ENST00000498550.5

PDS5B-209, Transcript of PDS5 cohesin associated factor B, humanhuman

TSL 1 (best)

Gene PDS5B, Length 4,238 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5B-209ENST00000498550 AEBP2Q6ZN18 517 aaPredicted RBP11.24□□□□□ -0.61
PDS5B-209ENST00000498550 CHIC1Q5VXU3 224 aa10.46□□□□□ -0.74
PDS5B-209ENST00000498550 PHF23Q9BUL5 403 aaPredicted RBP9.78□□□□□ -0.84
PDS5B-209ENST00000498550 NISCHQ9Y2I1 1504 aa9.49□□□□□ -0.89
PDS5B-209ENST00000498550 CCDC180Q9P1Z9 1646 aa9.27□□□□□ -0.92
PDS5B-209ENST00000498550 UNC13AQ9UPW8 1703 aa8.97□□□□□ -0.97
PDS5B-209ENST00000498550 BICRAQ9NZM4 1560 aa8.72□□□□□ -1.01
PDS5B-209ENST00000498550 MYO15BQ96JP2 1530 aa8.72□□□□□ -1.01
PDS5B-209ENST00000498550 SHROOM4Q9ULL8 1493 aa8.66□□□□□ -1.02
PDS5B-209ENST00000498550 DNAJC5BQ9UF47 199 aa8.59□□□□□ -1.04
PDS5B-209ENST00000498550 SENP3Q9H4L4 574 aaPredicted RBP8.51□□□□□ -1.05
PDS5B-209ENST00000498550 NACADO15069 1562 aa8.49□□□□□ -1.05
PDS5B-209ENST00000498550 ABCC9O60706 1549 aa8.47□□□□□ -1.05
PDS5B-209ENST00000498550 RB1CC1Q8TDY2 1594 aa8.47□□□□□ -1.05
PDS5B-209ENST00000498550 FOXD1Q16676 465 aa8.46□□□□□ -1.05
PDS5B-209ENST00000498550 PPP6R1Q9UPN7 881 aa8.44□□□□□ -1.06
PDS5B-209ENST00000498550 DCAF1Q9Y4B6 1507 aa8.34□□□□□ -1.07
PDS5B-209ENST00000498550 CC2D2AQ9P2K1 1620 aa8.24□□□□□ -1.09
PDS5B-209ENST00000498550 EIF4G1Q04637 1599 aaKnown RBP8.15□□□□□ -1.1
PDS5B-209ENST00000498550 DNAJC5Q9H3Z4 198 aa8.15□□□□□ -1.1
PDS5B-209ENST00000498550 ADRA2BP18089 450 aa8.14□□□□□ -1.11
PDS5B-209ENST00000498550 THOC2Q8NI27 1593 aaKnown RBP8.13□□□□□ -1.11
PDS5B-209ENST00000498550 CUX2O14529 1486 aa8.12□□□□□ -1.11
PDS5B-209ENST00000498550 PEG3Q9GZU2 1588 aa8.01□□□□□ -1.13
PDS5B-209ENST00000498550 PLPPR3Q6T4P5 718 aa7.99□□□□□ -1.13
PDS5B-209ENST00000498550 ZCCHC6Q5VYS8 1495 aaKnown RBP7.93□□□□□ -1.14
PDS5B-209ENST00000498550 CECR2Q9BXF3 1484 aa7.88□□□□□ -1.15
PDS5B-209ENST00000498550 HMGXB3Q12766 1538 aa7.87□□□□□ -1.15
PDS5B-209ENST00000498550 PRDM2Q13029 1718 aa7.81□□□□□ -1.16
PDS5B-209ENST00000498550 KIF21AQ7Z4S6 1674 aa7.78□□□□□ -1.16
PDS5B-209ENST00000498550 NCAPD3P42695 1498 aa7.77□□□□□ -1.17
PDS5B-209ENST00000498550 WDR62O43379 1518 aa7.76□□□□□ -1.17
PDS5B-209ENST00000498550 SMARCA2P51531 1590 aa7.75□□□□□ -1.17
PDS5B-209ENST00000498550 SCRIBQ14160 1630 aa7.72□□□□□ -1.17
PDS5B-209ENST00000498550 LAMC3Q9Y6N6 1575 aa7.71□□□□□ -1.17
PDS5B-209ENST00000498550 RIMBP3CA6NJZ7 1639 aa7.6□□□□□ -1.19
PDS5B-209ENST00000498550 RIMBP3BA6NNM3 1639 aa7.6□□□□□ -1.19
PDS5B-209ENST00000498550 RIMBP3Q9UFD9 1639 aa7.6□□□□□ -1.19
PDS5B-209ENST00000498550 SMARCA4P51532 1647 aa7.6□□□□□ -1.19
PDS5B-209ENST00000498550 BAZ1AQ9NRL2 1556 aaPredicted RBP7.59□□□□□ -1.19
PDS5B-209ENST00000498550 WDR97A6NE52 1622 aa7.52□□□□□ -1.2
PDS5B-209ENST00000498550 ATAD2BQ9ULI0 1458 aa7.52□□□□□ -1.21
PDS5B-209ENST00000498550 CLASP1Q7Z460 1538 aa7.49□□□□□ -1.21
PDS5B-209ENST00000498550 KIF13AQ9H1H9 1805 aa7.45□□□□□ -1.22
PDS5B-209ENST00000498550 TARBP1Q13395 1621 aaKnown RBP7.45□□□□□ -1.22
PDS5B-209ENST00000498550 NESP48681 1621 aa7.4□□□□□ -1.22
PDS5B-209ENST00000498550 SHROOM2Q13796 1616 aa7.4□□□□□ -1.22
PDS5B-209ENST00000498550 CHD1O14646 1710 aa7.39□□□□□ -1.23
PDS5B-209ENST00000498550 PABPN1Q86U42 306 aaKnown RBP eCLIP7.37□□□□□ -1.23
PDS5B-209ENST00000498550 ZBTB22O15209 634 aa7.35□□□□□ -1.23
PDS5B-209ENST00000498550 MAPK8IP2Q13387 824 aaPredicted RBP7.35□□□□□ -1.23
PDS5B-209ENST00000498550 MRC2Q9UBG0 1479 aa7.35□□□□□ -1.23
PDS5B-209ENST00000498550 ARHGEF11O15085 1522 aa7.33□□□□□ -1.24
PDS5B-209ENST00000498550 PPRC1Q5VV67 1664 aaKnown RBP7.31□□□□□ -1.24
PDS5B-209ENST00000498550 HOXD11P31277 338 aaPredicted RBP7.31□□□□□ -1.24
PDS5B-209ENST00000498550 URB2Q14146 1524 aaKnown RBP7.29□□□□□ -1.24
PDS5B-209ENST00000498550 ARAP1Q96P48 1450 aa7.29□□□□□ -1.24
PDS5B-209ENST00000498550 EIF4G3O43432 1585 aaKnown RBP7.28□□□□□ -1.24
PDS5B-209ENST00000498550 KCNA4P22459 653 aa7.28□□□□□ -1.24
PDS5B-209ENST00000498550 CFTRP13569 1480 aa7.27□□□□□ -1.25
PDS5B-209ENST00000498550 PIAS4Q8N2W9 510 aaPredicted RBP7.26□□□□□ -1.25
PDS5B-209ENST00000498550 RSF1Q96T23 1441 aaPredicted RBP7.24□□□□□ -1.25
PDS5B-209ENST00000498550 DMRT2Q9Y5R5 561 aa7.23□□□□□ -1.25
PDS5B-209ENST00000498550 NPM3O75607 178 aaKnown RBP7.2□□□□□ -1.26
PDS5B-209ENST00000498550 MROH2BQ7Z745 1585 aa7.18□□□□□ -1.26
PDS5B-209ENST00000498550 ABCA5Q8WWZ7 1642 aa7.17□□□□□ -1.26
PDS5B-209ENST00000498550 SLC4A2P04920 1241 aa7.17□□□□□ -1.26
PDS5B-209ENST00000498550 PBRM1Q86U86 1689 aa7.17□□□□□ -1.26
PDS5B-209ENST00000498550 PPP4R3CPQ6ZMV5 832 aa7.16□□□□□ -1.26
PDS5B-209ENST00000498550 MSH5O43196 834 aa7.13□□□□□ -1.27
PDS5B-209ENST00000498550 WIZO95785 1651 aa7.12□□□□□ -1.27
PDS5B-209ENST00000498550 DNMBPQ6XZF7 1577 aa7.11□□□□□ -1.27
PDS5B-209ENST00000498550 CADPSQ9ULU8 1353 aa7.11□□□□□ -1.27
PDS5B-209ENST00000498550 PDS5BQ9NTI5 1447 aa7.11□□□□□ -1.27
PDS5B-209ENST00000498550 ERCC6Q03468 1493 aa7.1□□□□□ -1.27
PDS5B-209ENST00000498550 BAZ1BQ9UIG0 1483 aaKnown RBP7.1□□□□□ -1.27
PDS5B-209ENST00000498550 TOP2AP11388 1531 aaKnown RBP7.1□□□□□ -1.27
PDS5B-209ENST00000498550 MAPKBP1O60336 1514 aa7.09□□□□□ -1.27
PDS5B-209ENST00000498550 IFT140Q96RY7 1462 aa7.08□□□□□ -1.28
PDS5B-209ENST00000498550 DIP2BQ9P265 1576 aa7.06□□□□□ -1.28
PDS5B-209ENST00000498550 GLI2P10070 1586 aa7.05□□□□□ -1.28
PDS5B-209ENST00000498550 ZNF608Q9ULD9 1512 aaPredicted RBP7.05□□□□□ -1.28
PDS5B-209ENST00000498550 ERCC6L2Q5T890 1561 aa7.04□□□□□ -1.28
PDS5B-209ENST00000498550 CEP164Q9UPV0 1460 aa7.04□□□□□ -1.28
PDS5B-209ENST00000498550 MAP3K4Q9Y6R4 1608 aa7.03□□□□□ -1.28
PDS5B-209ENST00000498550 FANCD2Q9BXW9 1451 aa7.03□□□□□ -1.28
PDS5B-209ENST00000498550 TOPBP1Q92547 1522 aa7.02□□□□□ -1.28
PDS5B-209ENST00000498550 RNF216Q9NWF9 866 aaPredicted RBP7.02□□□□□ -1.29
PDS5B-209ENST00000498550 KDM6BO15054 1643 aa7.02□□□□□ -1.29
PDS5B-209ENST00000498550 BIVM-ERCC5R4GMW8 1640 aa6.98□□□□□ -1.29
PDS5B-209ENST00000498550 CEP170Q5SW79 1584 aa6.97□□□□□ -1.29
PDS5B-209ENST00000498550 ADCY10Q96PN6 1610 aa6.97□□□□□ -1.29
PDS5B-209ENST00000498550 ABCC8Q09428 1581 aa6.96□□□□□ -1.3
PDS5B-209ENST00000498550 ADAMTS12P58397 1594 aa6.96□□□□□ -1.3
PDS5B-209ENST00000498550 MAGI1Q96QZ7 1491 aaPredicted RBP6.95□□□□□ -1.3
PDS5B-209ENST00000498550 NUP160Q12769 1436 aa6.94□□□□□ -1.3
PDS5B-209ENST00000498550 RUSC2Q8N2Y8 1516 aa6.94□□□□□ -1.3
PDS5B-209ENST00000498550 ADAMTSL3P82987 1691 aa6.94□□□□□ -1.3
PDS5B-209ENST00000498550 SYNJ1O43426 1573 aa6.94□□□□□ -1.3
PDS5B-209ENST00000498550 POTEDQ86YR6 584 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms