RNA–Protein interactions for RNA: ENST00000522147.4

IKBKB-223, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 5 BASIC

Gene IKBKB, Length 954 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-223ENST00000522147 NISCHQ9Y2I1 1504 aa32.49■■■□□ 2.79
IKBKB-223ENST00000522147 ABCC9O60706 1549 aa29.4■■■□□ 2.3
IKBKB-223ENST00000522147 CCDC180Q9P1Z9 1646 aa29.36■■■□□ 2.29
IKBKB-223ENST00000522147 AEBP2Q6ZN18 517 aaPredicted RBP29.36■■■□□ 2.29
IKBKB-223ENST00000522147 RB1CC1Q8TDY2 1594 aa28.01■■■□□ 2.07
IKBKB-223ENST00000522147 CHIC1Q5VXU3 224 aa27.84■■■□□ 2.05
IKBKB-223ENST00000522147 NACADO15069 1562 aa27.77■■■□□ 2.04
IKBKB-223ENST00000522147 DNAJC5BQ9UF47 199 aa27.65■■■□□ 2.02
IKBKB-223ENST00000522147 DCAF8L2P0C7V8 631 aa27.39■■□□□ 1.98
IKBKB-223ENST00000522147 UNC13AQ9UPW8 1703 aa27.34■■□□□ 1.97
IKBKB-223ENST00000522147 MYO15BQ96JP2 1530 aa27.34■■□□□ 1.97
IKBKB-223ENST00000522147 PABPN1Q86U42 306 aaKnown RBP eCLIP27.27■■□□□ 1.96
IKBKB-223ENST00000522147 BICRAQ9NZM4 1560 aa27.13■■□□□ 1.93
IKBKB-223ENST00000522147 ZCCHC6Q5VYS8 1495 aaKnown RBP26.91■■□□□ 1.9
IKBKB-223ENST00000522147 DCAF1Q9Y4B6 1507 aa26.9■■□□□ 1.9
IKBKB-223ENST00000522147 SHROOM4Q9ULL8 1493 aa26.89■■□□□ 1.9
IKBKB-223ENST00000522147 SCRIBQ14160 1630 aa26.63■■□□□ 1.85
IKBKB-223ENST00000522147 CC2D2AQ9P2K1 1620 aa26.6■■□□□ 1.85
IKBKB-223ENST00000522147 CECR2Q9BXF3 1484 aa26.55■■□□□ 1.84
IKBKB-223ENST00000522147 EIF4G1Q04637 1599 aaKnown RBP26.51■■□□□ 1.83
IKBKB-223ENST00000522147 DNAJC5Q9H3Z4 198 aa25.65■■□□□ 1.7
IKBKB-223ENST00000522147 NCAPD3P42695 1498 aa25.59■■□□□ 1.69
IKBKB-223ENST00000522147 CUX2O14529 1486 aa25.53■■□□□ 1.68
IKBKB-223ENST00000522147 ERCC6Q03468 1493 aa25.47■■□□□ 1.67
IKBKB-223ENST00000522147 ATAD2BQ9ULI0 1458 aa25.46■■□□□ 1.67
IKBKB-223ENST00000522147 SMARCA2P51531 1590 aa25.45■■□□□ 1.66
IKBKB-223ENST00000522147 HMGXB3Q12766 1538 aa25.43■■□□□ 1.66
IKBKB-223ENST00000522147 SMARCA4P51532 1647 aa25.42■■□□□ 1.66
IKBKB-223ENST00000522147 BAZ1AQ9NRL2 1556 aaPredicted RBP25.29■■□□□ 1.64
IKBKB-223ENST00000522147 BAZ1BQ9UIG0 1483 aaKnown RBP25.23■■□□□ 1.63
IKBKB-223ENST00000522147 PEG3Q9GZU2 1588 aa25.2■■□□□ 1.62
IKBKB-223ENST00000522147 NESP48681 1621 aa25.18■■□□□ 1.62
IKBKB-223ENST00000522147 LAMC3Q9Y6N6 1575 aa25.1■■□□□ 1.61
IKBKB-223ENST00000522147 SENP3Q9H4L4 574 aaPredicted RBP25.09■■□□□ 1.61
IKBKB-223ENST00000522147 THOC2Q8NI27 1593 aaKnown RBP25.05■■□□□ 1.6
IKBKB-223ENST00000522147 MROH2BQ7Z745 1585 aa24.99■■□□□ 1.59
IKBKB-223ENST00000522147 PDS5BQ9NTI5 1447 aa24.94■■□□□ 1.58
IKBKB-223ENST00000522147 KIF21AQ7Z4S6 1674 aa24.92■■□□□ 1.58
IKBKB-223ENST00000522147 CADPSQ9ULU8 1353 aa24.78■■□□□ 1.56
IKBKB-223ENST00000522147 PHF23Q9BUL5 403 aaPredicted RBP24.76■■□□□ 1.55
IKBKB-223ENST00000522147 MRC2Q9UBG0 1479 aa24.72■■□□□ 1.55
IKBKB-223ENST00000522147 WIZO95785 1651 aa24.69■■□□□ 1.54
IKBKB-223ENST00000522147 WDR62O43379 1518 aa24.68■■□□□ 1.54
IKBKB-223ENST00000522147 CEP164Q9UPV0 1460 aa24.59■■□□□ 1.53
IKBKB-223ENST00000522147 FANCD2Q9BXW9 1451 aa24.51■■□□□ 1.51
IKBKB-223ENST00000522147 CFTRP13569 1480 aa24.47■■□□□ 1.51
IKBKB-223ENST00000522147 TOP2AP11388 1531 aaKnown RBP24.43■■□□□ 1.5
IKBKB-223ENST00000522147 TRIM41Q8WV44 630 aa24.4■■□□□ 1.5
IKBKB-223ENST00000522147 RSF1Q96T23 1441 aaPredicted RBP24.39■■□□□ 1.5
IKBKB-223ENST00000522147 PRDM2Q13029 1718 aa24.32■■□□□ 1.48
IKBKB-223ENST00000522147 URB2Q14146 1524 aaKnown RBP24.3■■□□□ 1.48
IKBKB-223ENST00000522147 OSCARQ8IYS5 282 aa24.25■■□□□ 1.47
IKBKB-223ENST00000522147 IFT140Q96RY7 1462 aa24.11■■□□□ 1.45
IKBKB-223ENST00000522147 CCDC88BA6NC98 1476 aa24.08■■□□□ 1.45
IKBKB-223ENST00000522147 ABCC8Q09428 1581 aa24.03■■□□□ 1.44
IKBKB-223ENST00000522147 TOPBP1Q92547 1522 aa24.02■■□□□ 1.44
IKBKB-223ENST00000522147 ZNF608Q9ULD9 1512 aaPredicted RBP24■■□□□ 1.43
IKBKB-223ENST00000522147 RIMBP3CA6NJZ7 1639 aa23.99■■□□□ 1.43
IKBKB-223ENST00000522147 RIMBP3BA6NNM3 1639 aa23.99■■□□□ 1.43
IKBKB-223ENST00000522147 RIMBP3Q9UFD9 1639 aa23.99■■□□□ 1.43
IKBKB-223ENST00000522147 DNMBPQ6XZF7 1577 aa23.95■■□□□ 1.43
IKBKB-223ENST00000522147 EIF4G3O43432 1585 aaKnown RBP23.95■■□□□ 1.42
IKBKB-223ENST00000522147 ARHGEF11O15085 1522 aa23.89■■□□□ 1.42
IKBKB-223ENST00000522147 TARBP1Q13395 1621 aaKnown RBP23.84■■□□□ 1.41
IKBKB-223ENST00000522147 CHD1O14646 1710 aa23.81■■□□□ 1.4
IKBKB-223ENST00000522147 POLA1P09884 1462 aaPredicted RBP23.76■■□□□ 1.39
IKBKB-223ENST00000522147 AQRO60306 1485 aaKnown RBP eCLIP23.75■■□□□ 1.39
IKBKB-223ENST00000522147 WDR97A6NE52 1622 aa23.7■■□□□ 1.38
IKBKB-223ENST00000522147 CYB5RLQ6IPT4 315 aa23.65■■□□□ 1.38
IKBKB-223ENST00000522147 SOGA1O94964 1423 aa23.63■■□□□ 1.37
IKBKB-223ENST00000522147 FBLN2P98095 1184 aa23.63■■□□□ 1.37
IKBKB-223ENST00000522147 ARAP1Q96P48 1450 aa23.62■■□□□ 1.37
IKBKB-223ENST00000522147 RAD54L2Q9Y4B4 1467 aa23.62■■□□□ 1.37
IKBKB-223ENST00000522147 FGD5Q6ZNL6 1462 aa23.58■■□□□ 1.37
IKBKB-223ENST00000522147 TDRD9Q8NDG6 1382 aaKnown RBP23.57■■□□□ 1.36
IKBKB-223ENST00000522147 SNAPC4Q5SXM2 1469 aa23.56■■□□□ 1.36
IKBKB-223ENST00000522147 MAGI1Q96QZ7 1491 aaPredicted RBP23.55■■□□□ 1.36
IKBKB-223ENST00000522147 SYNJ1O43426 1573 aa23.53■■□□□ 1.36
IKBKB-223ENST00000522147 CLASP1Q7Z460 1538 aa23.53■■□□□ 1.36
IKBKB-223ENST00000522147 CUX1P39880 1505 aa23.51■■□□□ 1.35
IKBKB-223ENST00000522147 GRIN2BQ13224 1484 aa23.49■■□□□ 1.35
IKBKB-223ENST00000522147 TRHP20396 242 aaPredicted RBP23.48■■□□□ 1.35
IKBKB-223ENST00000522147 CHMP7Q8WUX9 453 aaPredicted RBP23.46■■□□□ 1.35
IKBKB-223ENST00000522147 SYNJ2O15056 1496 aa23.44■■□□□ 1.34
IKBKB-223ENST00000522147 PBRM1Q86U86 1689 aa23.42■■□□□ 1.34
IKBKB-223ENST00000522147 FOXD1Q16676 465 aa23.37■■□□□ 1.33
IKBKB-223ENST00000522147 GAPVD1Q14C86 1478 aa23.36■■□□□ 1.33
IKBKB-223ENST00000522147 ABCA5Q8WWZ7 1642 aa23.33■■□□□ 1.32
IKBKB-223ENST00000522147 ABCA10Q8WWZ4 1543 aa23.33■■□□□ 1.32
IKBKB-223ENST00000522147 GRIN2AQ12879 1464 aa23.19■■□□□ 1.3
IKBKB-223ENST00000522147 WRNQ14191 1432 aaPredicted RBP eCLIP23.19■■□□□ 1.3
IKBKB-223ENST00000522147 ADAMTS12P58397 1594 aa23.17■■□□□ 1.3
IKBKB-223ENST00000522147 BIVM-ERCC5R4GMW8 1640 aa23.15■■□□□ 1.3
IKBKB-223ENST00000522147 TOP2BQ02880 1626 aa23.13■■□□□ 1.29
IKBKB-223ENST00000522147 NUP160Q12769 1436 aa23.11■■□□□ 1.29
IKBKB-223ENST00000522147 CEP170Q5SW79 1584 aa23.1■■□□□ 1.29
IKBKB-223ENST00000522147 SUPT5HO00267 1087 aaKnown RBP23.08■■□□□ 1.29
IKBKB-223ENST00000522147 FHAD1B1AJZ9 1412 aa23.08■■□□□ 1.28
IKBKB-223ENST00000522147 SHROOM2Q13796 1616 aa23.06■■□□□ 1.28
IKBKB-223ENST00000522147 ERICH3Q5RHP9 1530 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms