RNA–Protein interactions for RNA: ENST00000466078.1

PDS5B-204, Transcript of PDS5 cohesin associated factor B, humanhuman

TSL 2

Gene PDS5B, Length 1,889 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5B-204ENST00000466078 AEBP2Q6ZN18 517 aaPredicted RBP17.08■□□□□ 0.33
PDS5B-204ENST00000466078 POTEDQ86YR6 584 aa16.31■□□□□ 0.2
PDS5B-204ENST00000466078 CHIC1Q5VXU3 224 aa16.23■□□□□ 0.19
PDS5B-204ENST00000466078 SENP3Q9H4L4 574 aaPredicted RBP15.11■□□□□ 0.01
PDS5B-204ENST00000466078 PHF23Q9BUL5 403 aaPredicted RBP14.56□□□□□ -0.08
PDS5B-204ENST00000466078 FOXD1Q16676 465 aa14.1□□□□□ -0.15
PDS5B-204ENST00000466078 MSH5O43196 834 aa14.06□□□□□ -0.16
PDS5B-204ENST00000466078 CACNB1Q02641 598 aaPredicted RBP12.97□□□□□ -0.33
PDS5B-204ENST00000466078 PIAS4Q8N2W9 510 aaPredicted RBP12.82□□□□□ -0.36
PDS5B-204ENST00000466078 POTEHQ6S545 545 aa12.5□□□□□ -0.41
PDS5B-204ENST00000466078 PPP6R1Q9UPN7 881 aa11.81□□□□□ -0.52
PDS5B-204ENST00000466078 ADRA2BP18089 450 aa11.72□□□□□ -0.53
PDS5B-204ENST00000466078 RNF39Q9H2S5 420 aa11.71□□□□□ -0.53
PDS5B-204ENST00000466078 DMRT2Q9Y5R5 561 aa11.67□□□□□ -0.54
PDS5B-204ENST00000466078 C1QBPQ07021 282 aaKnown RBP11.57□□□□□ -0.56
PDS5B-204ENST00000466078 MAPK8IP2Q13387 824 aaPredicted RBP11.22□□□□□ -0.61
PDS5B-204ENST00000466078 DCAF8L1A6NGE4 600 aa11.21□□□□□ -0.62
PDS5B-204ENST00000466078 PLPPR3Q6T4P5 718 aa11.18□□□□□ -0.62
PDS5B-204ENST00000466078 SCAF1Q9H7N4 1312 aaKnown RBP11.08□□□□□ -0.63
PDS5B-204ENST00000466078 SP7Q8TDD2 431 aaPredicted RBP10.98□□□□□ -0.65
PDS5B-204ENST00000466078 PLSCR2Q9NRY7 297 aa10.97□□□□□ -0.65
PDS5B-204ENST00000466078 DNAJC5BQ9UF47 199 aa10.77□□□□□ -0.69
PDS5B-204ENST00000466078 HOXD11P31277 338 aaPredicted RBP10.61□□□□□ -0.71
PDS5B-204ENST00000466078 CHRDL2Q6WN34 429 aa10.42□□□□□ -0.74
PDS5B-204ENST00000466078 DSG3P32926 999 aa10.38□□□□□ -0.75
PDS5B-204ENST00000466078 LHX8Q68G74 356 aa10.27□□□□□ -0.76
PDS5B-204ENST00000466078 RBM42Q9BTD8 480 aaKnown RBP10.16□□□□□ -0.78
PDS5B-204ENST00000466078 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.12□□□□□ -0.79
PDS5B-204ENST00000466078 RNF216Q9NWF9 866 aaPredicted RBP10.12□□□□□ -0.79
PDS5B-204ENST00000466078 HAX1O00165 279 aa10.1□□□□□ -0.79
PDS5B-204ENST00000466078 CAPN15O75808 1086 aa10.08□□□□□ -0.8
PDS5B-204ENST00000466078 PCDH10Q9P2E7 1040 aa9.93□□□□□ -0.82
PDS5B-204ENST00000466078 SPINK5Q9NQ38 1064 aaPredicted RBP9.88□□□□□ -0.83
PDS5B-204ENST00000466078 CNKSR2Q8WXI2 1034 aa9.79□□□□□ -0.84
PDS5B-204ENST00000466078 PIP4P2Q8N4L2 257 aa9.78□□□□□ -0.84
PDS5B-204ENST00000466078 POTEMA6NI47 508 aa9.72□□□□□ -0.85
PDS5B-204ENST00000466078 EVX2Q03828 476 aa9.65□□□□□ -0.86
PDS5B-204ENST00000466078 POTEGQ6S5H5 508 aa9.64□□□□□ -0.87
PDS5B-204ENST00000466078 U3KPZ7 1027 aaPredicted RBP9.59□□□□□ -0.87
PDS5B-204ENST00000466078 ABCB7O75027 752 aa9.59□□□□□ -0.87
PDS5B-204ENST00000466078 ZNF219Q9P2Y4 722 aaPredicted RBP9.56□□□□□ -0.88
PDS5B-204ENST00000466078 APLP2Q06481 763 aa9.54□□□□□ -0.88
PDS5B-204ENST00000466078 FXR2P51116 673 aaKnown RBP eCLIP9.52□□□□□ -0.89
PDS5B-204ENST00000466078 GABBR2O75899 941 aa9.51□□□□□ -0.89
PDS5B-204ENST00000466078 AKT1S1Q96B36 256 aa9.51□□□□□ -0.89
PDS5B-204ENST00000466078 PPP4R3CPQ6ZMV5 832 aa9.5□□□□□ -0.89
PDS5B-204ENST00000466078 DNAJC5Q9H3Z4 198 aa9.5□□□□□ -0.89
PDS5B-204ENST00000466078 TRHP20396 242 aaPredicted RBP9.48□□□□□ -0.89
PDS5B-204ENST00000466078 REM2Q8IYK8 340 aaPredicted RBP9.32□□□□□ -0.92
PDS5B-204ENST00000466078 C19orf67A6NJJ6 358 aa9.28□□□□□ -0.92
PDS5B-204ENST00000466078 OTUD5Q96G74 571 aa9.2□□□□□ -0.94
PDS5B-204ENST00000466078 PITPNM1O00562 1244 aa9.19□□□□□ -0.94
PDS5B-204ENST00000466078 POTEIP0CG38 1075 aa9.19□□□□□ -0.94
PDS5B-204ENST00000466078 CLCN6P51797 869 aa9.12□□□□□ -0.95
PDS5B-204ENST00000466078 NCBP3Q53F19 620 aaKnown RBP9.06□□□□□ -0.96
PDS5B-204ENST00000466078 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.04□□□□□ -0.96
PDS5B-204ENST00000466078 HNRNPUL2Q1KMD3 747 aaKnown RBP9.04□□□□□ -0.96
PDS5B-204ENST00000466078 DCBLD2Q96PD2 775 aa9□□□□□ -0.97
PDS5B-204ENST00000466078 PRKAR2AP13861 404 aaKnown RBP8.98□□□□□ -0.97
PDS5B-204ENST00000466078 NPM3O75607 178 aaKnown RBP8.96□□□□□ -0.98
PDS5B-204ENST00000466078 CDAN1Q8IWY9 1227 aa8.91□□□□□ -0.98
PDS5B-204ENST00000466078 MMRN1Q13201 1228 aa8.88□□□□□ -0.99
PDS5B-204ENST00000466078 FAM163AQ96GL9 167 aaPredicted RBP8.87□□□□□ -0.99
PDS5B-204ENST00000466078 POLA2Q14181 598 aa8.87□□□□□ -0.99
PDS5B-204ENST00000466078 SAMD1Q6SPF0 538 aaPredicted RBP8.85□□□□□ -0.99
PDS5B-204ENST00000466078 LCE2DQ5TA82 110 aaPredicted RBP8.84□□□□□ -0.99
PDS5B-204ENST00000466078 KCNA4P22459 653 aa8.83□□□□□ -1
PDS5B-204ENST00000466078 POTEB2H3BUK9 544 aa8.8□□□□□ -1
PDS5B-204ENST00000466078 ZBTB12Q9Y330 459 aaPredicted RBP8.8□□□□□ -1
PDS5B-204ENST00000466078 MAMSTRQ6ZN01 415 aa8.79□□□□□ -1
PDS5B-204ENST00000466078 SPNS2Q8IVW8 549 aa8.72□□□□□ -1.01
PDS5B-204ENST00000466078 EHMT2Q96KQ7 1210 aa8.63□□□□□ -1.03
PDS5B-204ENST00000466078 CD44P16070 742 aaKnown RBP8.6□□□□□ -1.03
PDS5B-204ENST00000466078 OSCARQ8IYS5 282 aa8.58□□□□□ -1.04
PDS5B-204ENST00000466078 SPDYE1Q8NFV5 336 aaPredicted RBP8.56□□□□□ -1.04
PDS5B-204ENST00000466078 SLC4A2P04920 1241 aa8.55□□□□□ -1.04
PDS5B-204ENST00000466078 SCUBE2Q9NQ36 999 aa8.55□□□□□ -1.04
PDS5B-204ENST00000466078 CLEC11AQ9Y240 323 aa8.49□□□□□ -1.05
PDS5B-204ENST00000466078 ZNF579Q8NAF0 562 aaKnown RBP8.45□□□□□ -1.06
PDS5B-204ENST00000466078 POTEJP0CG39 1038 aa8.4□□□□□ -1.07
PDS5B-204ENST00000466078 CHADLQ6NUI6 762 aa8.4□□□□□ -1.07
PDS5B-204ENST00000466078 C7P10643 843 aa8.38□□□□□ -1.07
PDS5B-204ENST00000466078 ILDR1Q86SU0 546 aaPredicted RBP8.38□□□□□ -1.07
PDS5B-204ENST00000466078 SLC39A7Q92504 469 aa8.36□□□□□ -1.07
PDS5B-204ENST00000466078 METRNQ9UJH8 293 aa8.34□□□□□ -1.07
PDS5B-204ENST00000466078 TRIM41Q8WV44 630 aa8.34□□□□□ -1.07
PDS5B-204ENST00000466078 SLC4A1APQ9BWU0 796 aaKnown RBP8.34□□□□□ -1.07
PDS5B-204ENST00000466078 GALR2O43603 387 aaPredicted RBP8.3□□□□□ -1.08
PDS5B-204ENST00000466078 SPDYE2BA6NHP3 402 aa8.29□□□□□ -1.08
PDS5B-204ENST00000466078 SPDYE6P0CI01 402 aa8.29□□□□□ -1.08
PDS5B-204ENST00000466078 SPDYE2Q495Y8 402 aa8.29□□□□□ -1.08
PDS5B-204ENST00000466078 MYCNP04198 464 aaPredicted RBP8.27□□□□□ -1.09
PDS5B-204ENST00000466078 PELP1Q8IZL8 1130 aaKnown RBP8.27□□□□□ -1.09
PDS5B-204ENST00000466078 CSRNP3Q8WYN3 585 aa8.26□□□□□ -1.09
PDS5B-204ENST00000466078 FARP1Q9Y4F1 1045 aaPredicted RBP8.26□□□□□ -1.09
PDS5B-204ENST00000466078 ZRANB1Q9UGI0 708 aa8.23□□□□□ -1.09
PDS5B-204ENST00000466078 ST18O60284 1047 aa8.22□□□□□ -1.09
PDS5B-204ENST00000466078 PRR29P0C7W0 189 aa8.21□□□□□ -1.1
PDS5B-204ENST00000466078 FOXD4L1Q9NU39 408 aa8.21□□□□□ -1.1
PDS5B-204ENST00000466078 ABCC9O60706 1549 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms