Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.34■□□□□ 0.69
SFTPBP07988 ALDH1A3-203ENST00000557963 1670 ntBASIC19.33■□□□□ 0.69
SFTPBP07988 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SFTPBP07988 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
SFTPBP07988 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SFTPBP07988 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SFTPBP07988 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SFTPBP07988 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SFTPBP07988 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.33■□□□□ 0.68
SFTPBP07988 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.33■□□□□ 0.68
SFTPBP07988 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SFTPBP07988 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.33■□□□□ 0.68
SFTPBP07988 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
SFTPBP07988 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SFTPBP07988 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SFTPBP07988 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.32■□□□□ 0.68
SFTPBP07988 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SFTPBP07988 GUSBP5-201ENST00000418136 578 ntBASIC19.32■□□□□ 0.68
SFTPBP07988 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.32■□□□□ 0.68
SFTPBP07988 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SFTPBP07988 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SFTPBP07988 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SFTPBP07988 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SFTPBP07988 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.32■□□□□ 0.68
SFTPBP07988 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SFTPBP07988 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SFTPBP07988 AF131216.4-201ENST00000638924 1588 ntBASIC19.32■□□□□ 0.68
SFTPBP07988 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SFTPBP07988 AC092068.2-201ENST00000590491 1708 ntBASIC19.31■□□□□ 0.68
SFTPBP07988 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SFTPBP07988 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.31■□□□□ 0.68
SFTPBP07988 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.31■□□□□ 0.68
SFTPBP07988 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SFTPBP07988 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.31■□□□□ 0.68
SFTPBP07988 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SFTPBP07988 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.31■□□□□ 0.68
SFTPBP07988 MIR4281-201ENST00000580852 62 ntBASIC19.31■□□□□ 0.68
SFTPBP07988 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SFTPBP07988 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SFTPBP07988 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
SFTPBP07988 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.31■□□□□ 0.68
SFTPBP07988 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.31■□□□□ 0.68
SFTPBP07988 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SFTPBP07988 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.31■□□□□ 0.68
SFTPBP07988 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SFTPBP07988 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SFTPBP07988 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
SFTPBP07988 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SFTPBP07988 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
SFTPBP07988 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SFTPBP07988 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SFTPBP07988 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.3■□□□□ 0.68
SFTPBP07988 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SFTPBP07988 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.3■□□□□ 0.68
SFTPBP07988 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.3■□□□□ 0.68
SFTPBP07988 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SFTPBP07988 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
SFTPBP07988 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SFTPBP07988 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SFTPBP07988 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SFTPBP07988 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.29■□□□□ 0.68
SFTPBP07988 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SFTPBP07988 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SFTPBP07988 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SFTPBP07988 BX664725.1-201ENST00000438252 379 ntBASIC19.29■□□□□ 0.68
SFTPBP07988 Z92544.1-202ENST00000571933 1220 ntBASIC19.29■□□□□ 0.68
SFTPBP07988 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SFTPBP07988 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SFTPBP07988 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SFTPBP07988 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SFTPBP07988 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SFTPBP07988 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SFTPBP07988 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SFTPBP07988 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.28■□□□□ 0.68
SFTPBP07988 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SFTPBP07988 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SFTPBP07988 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SFTPBP07988 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SFTPBP07988 KRT125P-201ENST00000546827 989 ntBASIC19.28■□□□□ 0.68
SFTPBP07988 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.28■□□□□ 0.68
SFTPBP07988 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SFTPBP07988 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.28■□□□□ 0.68
SFTPBP07988 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
SFTPBP07988 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SFTPBP07988 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.27■□□□□ 0.68
SFTPBP07988 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SFTPBP07988 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SFTPBP07988 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
SFTPBP07988 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.27■□□□□ 0.68
SFTPBP07988 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SFTPBP07988 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
SFTPBP07988 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SFTPBP07988 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
SFTPBP07988 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.27■□□□□ 0.68
SFTPBP07988 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SFTPBP07988 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.27■□□□□ 0.68
SFTPBP07988 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SFTPBP07988 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
SFTPBP07988 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SFTPBP07988 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms