Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PPP1R3DO95685 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.21■□□□□ 0.83
PPP1R3DO95685 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.2■□□□□ 0.82
PPP1R3DO95685 KRT8P33-201ENST00000508125 1423 ntBASIC20.2■□□□□ 0.82
PPP1R3DO95685 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PPP1R3DO95685 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
PPP1R3DO95685 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PPP1R3DO95685 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.2■□□□□ 0.82
PPP1R3DO95685 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.2■□□□□ 0.82
PPP1R3DO95685 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.2■□□□□ 0.82
PPP1R3DO95685 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.2■□□□□ 0.82
PPP1R3DO95685 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PPP1R3DO95685 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PPP1R3DO95685 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PPP1R3DO95685 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
PPP1R3DO95685 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
PPP1R3DO95685 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PPP1R3DO95685 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PPP1R3DO95685 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.19■□□□□ 0.82
PPP1R3DO95685 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PPP1R3DO95685 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.19■□□□□ 0.82
PPP1R3DO95685 AC103834.1-201ENST00000520383 144 ntBASIC20.19■□□□□ 0.82
PPP1R3DO95685 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PPP1R3DO95685 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.19■□□□□ 0.82
PPP1R3DO95685 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.19■□□□□ 0.82
PPP1R3DO95685 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PPP1R3DO95685 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PPP1R3DO95685 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PPP1R3DO95685 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PPP1R3DO95685 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PPP1R3DO95685 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
PPP1R3DO95685 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PPP1R3DO95685 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.18■□□□□ 0.82
PPP1R3DO95685 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PPP1R3DO95685 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PPP1R3DO95685 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
PPP1R3DO95685 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.17■□□□□ 0.82
PPP1R3DO95685 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PPP1R3DO95685 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
PPP1R3DO95685 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PPP1R3DO95685 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PPP1R3DO95685 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.17■□□□□ 0.82
PPP1R3DO95685 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PPP1R3DO95685 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PPP1R3DO95685 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PPP1R3DO95685 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PPP1R3DO95685 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
PPP1R3DO95685 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.16■□□□□ 0.82
PPP1R3DO95685 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
PPP1R3DO95685 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
PPP1R3DO95685 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PPP1R3DO95685 AL353803.4-201ENST00000565882 1934 ntBASIC20.16■□□□□ 0.82
PPP1R3DO95685 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.16■□□□□ 0.82
PPP1R3DO95685 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.16■□□□□ 0.82
PPP1R3DO95685 AC103724.3-201ENST00000564481 992 ntBASIC20.16■□□□□ 0.82
PPP1R3DO95685 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
PPP1R3DO95685 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PPP1R3DO95685 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PPP1R3DO95685 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.16■□□□□ 0.82
PPP1R3DO95685 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PPP1R3DO95685 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PPP1R3DO95685 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
PPP1R3DO95685 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PPP1R3DO95685 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PPP1R3DO95685 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PPP1R3DO95685 YBX1P4-201ENST00000392794 808 ntBASIC20.15■□□□□ 0.82
PPP1R3DO95685 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.15■□□□□ 0.82
PPP1R3DO95685 SNX5-217ENST00000606557 1087 ntBASIC20.15■□□□□ 0.82
PPP1R3DO95685 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PPP1R3DO95685 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PPP1R3DO95685 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.15■□□□□ 0.82
PPP1R3DO95685 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.15■□□□□ 0.82
PPP1R3DO95685 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PPP1R3DO95685 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PPP1R3DO95685 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PPP1R3DO95685 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.14■□□□□ 0.82
PPP1R3DO95685 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
PPP1R3DO95685 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PPP1R3DO95685 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PPP1R3DO95685 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
PPP1R3DO95685 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PPP1R3DO95685 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.14■□□□□ 0.81
PPP1R3DO95685 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.14■□□□□ 0.81
PPP1R3DO95685 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PPP1R3DO95685 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
PPP1R3DO95685 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PPP1R3DO95685 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PPP1R3DO95685 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.14■□□□□ 0.81
PPP1R3DO95685 LINC00526-201ENST00000581067 1875 ntBASIC20.13■□□□□ 0.81
PPP1R3DO95685 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
PPP1R3DO95685 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PPP1R3DO95685 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
PPP1R3DO95685 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.13■□□□□ 0.81
PPP1R3DO95685 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.13■□□□□ 0.81
PPP1R3DO95685 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PPP1R3DO95685 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PPP1R3DO95685 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.13■□□□□ 0.81
PPP1R3DO95685 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PPP1R3DO95685 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.13■□□□□ 0.81
PPP1R3DO95685 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms