Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
TCRBV4S1A1TA0A5B7 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TCRBV4S1A1TA0A5B7 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TCRBV4S1A1TA0A5B7 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TCRBV4S1A1TA0A5B7 AL161729.1-201ENST00000604104 1402 ntBASIC17.95■□□□□ 0.46
TCRBV4S1A1TA0A5B7 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TCRBV4S1A1TA0A5B7 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TCRBV4S1A1TA0A5B7 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TCRBV4S1A1TA0A5B7 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC17.95■□□□□ 0.46
TCRBV4S1A1TA0A5B7 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TCRBV4S1A1TA0A5B7 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TCRBV4S1A1TA0A5B7 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TCRBV4S1A1TA0A5B7 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC17.94■□□□□ 0.46
TCRBV4S1A1TA0A5B7 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC17.94■□□□□ 0.46
TCRBV4S1A1TA0A5B7 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TCRBV4S1A1TA0A5B7 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TCRBV4S1A1TA0A5B7 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TCRBV4S1A1TA0A5B7 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TCRBV4S1A1TA0A5B7 AC096631.2-201ENST00000436136 790 ntBASIC17.94■□□□□ 0.46
TCRBV4S1A1TA0A5B7 STK32C-205ENST00000456004 607 ntTSL 2 BASIC17.94■□□□□ 0.46
TCRBV4S1A1TA0A5B7 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC17.94■□□□□ 0.46
TCRBV4S1A1TA0A5B7 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.94■□□□□ 0.46
TCRBV4S1A1TA0A5B7 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC17.94■□□□□ 0.46
TCRBV4S1A1TA0A5B7 AL512631.2-201ENST00000604634 923 ntBASIC17.94■□□□□ 0.46
TCRBV4S1A1TA0A5B7 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TCRBV4S1A1TA0A5B7 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TCRBV4S1A1TA0A5B7 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TCRBV4S1A1TA0A5B7 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TCRBV4S1A1TA0A5B7 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC17.93■□□□□ 0.46
TCRBV4S1A1TA0A5B7 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TCRBV4S1A1TA0A5B7 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TCRBV4S1A1TA0A5B7 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC17.93■□□□□ 0.46
TCRBV4S1A1TA0A5B7 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TCRBV4S1A1TA0A5B7 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TCRBV4S1A1TA0A5B7 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TCRBV4S1A1TA0A5B7 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TCRBV4S1A1TA0A5B7 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TCRBV4S1A1TA0A5B7 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
TCRBV4S1A1TA0A5B7 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TCRBV4S1A1TA0A5B7 AC005703.6-201ENST00000623265 1329 ntBASIC17.93■□□□□ 0.46
TCRBV4S1A1TA0A5B7 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
TCRBV4S1A1TA0A5B7 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC17.92■□□□□ 0.46
TCRBV4S1A1TA0A5B7 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TCRBV4S1A1TA0A5B7 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV4S1A1TA0A5B7 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
TCRBV4S1A1TA0A5B7 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC17.92■□□□□ 0.46
TCRBV4S1A1TA0A5B7 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV4S1A1TA0A5B7 MIR638-201ENST00000385237 100 ntBASIC17.92■□□□□ 0.46
TCRBV4S1A1TA0A5B7 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TCRBV4S1A1TA0A5B7 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV4S1A1TA0A5B7 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV4S1A1TA0A5B7 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TCRBV4S1A1TA0A5B7 ANOS2P-203ENST00000472227 1816 ntBASIC17.91■□□□□ 0.46
TCRBV4S1A1TA0A5B7 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TCRBV4S1A1TA0A5B7 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TCRBV4S1A1TA0A5B7 RASSF1-AS1-201ENST00000629828 790 ntBASIC17.91■□□□□ 0.46
TCRBV4S1A1TA0A5B7 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
TCRBV4S1A1TA0A5B7 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TCRBV4S1A1TA0A5B7 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC17.91■□□□□ 0.46
TCRBV4S1A1TA0A5B7 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC17.91■□□□□ 0.46
TCRBV4S1A1TA0A5B7 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TCRBV4S1A1TA0A5B7 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
TCRBV4S1A1TA0A5B7 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TCRBV4S1A1TA0A5B7 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TCRBV4S1A1TA0A5B7 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TCRBV4S1A1TA0A5B7 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TCRBV4S1A1TA0A5B7 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TCRBV4S1A1TA0A5B7 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TCRBV4S1A1TA0A5B7 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TCRBV4S1A1TA0A5B7 CD37-213ENST00000598095 1598 ntTSL 2 BASIC17.9■□□□□ 0.46
TCRBV4S1A1TA0A5B7 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TCRBV4S1A1TA0A5B7 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC17.9■□□□□ 0.46
TCRBV4S1A1TA0A5B7 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TCRBV4S1A1TA0A5B7 REST-206ENST00000612429 1376 ntTSL 5 BASIC17.9■□□□□ 0.46
TCRBV4S1A1TA0A5B7 REST-207ENST00000616975 1370 ntTSL 5 BASIC17.9■□□□□ 0.46
TCRBV4S1A1TA0A5B7 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TCRBV4S1A1TA0A5B7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TCRBV4S1A1TA0A5B7 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TCRBV4S1A1TA0A5B7 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC17.9■□□□□ 0.46
TCRBV4S1A1TA0A5B7 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.89■□□□□ 0.46
TCRBV4S1A1TA0A5B7 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC17.89■□□□□ 0.46
TCRBV4S1A1TA0A5B7 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.46
TCRBV4S1A1TA0A5B7 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TCRBV4S1A1TA0A5B7 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TCRBV4S1A1TA0A5B7 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TCRBV4S1A1TA0A5B7 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
TCRBV4S1A1TA0A5B7 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC17.89■□□□□ 0.45
TCRBV4S1A1TA0A5B7 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TCRBV4S1A1TA0A5B7 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC17.89■□□□□ 0.45
TCRBV4S1A1TA0A5B7 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC17.89■□□□□ 0.45
TCRBV4S1A1TA0A5B7 SRD5A1P1-201ENST00000442297 786 ntBASIC17.89■□□□□ 0.45
TCRBV4S1A1TA0A5B7 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC17.89■□□□□ 0.45
TCRBV4S1A1TA0A5B7 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC17.89■□□□□ 0.45
TCRBV4S1A1TA0A5B7 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.89■□□□□ 0.45
TCRBV4S1A1TA0A5B7 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TCRBV4S1A1TA0A5B7 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC17.89■□□□□ 0.45
TCRBV4S1A1TA0A5B7 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TCRBV4S1A1TA0A5B7 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC17.88■□□□□ 0.45
TCRBV4S1A1TA0A5B7 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TCRBV4S1A1TA0A5B7 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms