Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 OXR1-211ENST00000519415 2476 ntTSL 24.57□□□□□ -1.681e-13■■■■■ 64.1
LSM11P83369 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.44□□□□□ -1.861e-13■■■■■ 64.1
LSM11P83369 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.93□□□□□ -1.941e-13■■■■■ 64.1
LSM11P83369 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.31□□□□□ -2.041e-13■■■■■ 64.1
LSM11P83369 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC7.22□□□□□ -1.255e-10■■■■■ 63.9
LSM11P83369 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.244e-7■■■■■ 63.6
LSM11P83369 COQ8A-209ENST00000489044 941 ntTSL 316.18■□□□□ 0.184e-7■■■■■ 63.6
LSM11P83369 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.71■□□□□ 0.114e-7■■■■■ 63.6
LSM11P83369 COQ8A-205ENST00000478406 3612 ntTSL 213.86□□□□□ -0.194e-7■■■■■ 63.6
LSM11P83369 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.414e-7■■■■■ 63.6
LSM11P83369 PIK3CB-202ENST00000461451 667 ntTSL 220.65■□□□□ 0.93e-13■■■■■ 63.1
LSM11P83369 PIK3CB-210ENST00000483968 721 ntTSL 319.45■□□□□ 0.73e-13■■■■■ 63.1
LSM11P83369 PIK3CB-204ENST00000462898 4747 ntTSL 515.69■□□□□ 0.13e-13■■■■■ 63.1
LSM11P83369 PIK3CB-205ENST00000465581 690 ntTSL 311.78□□□□□ -0.523e-13■■■■■ 63.1
LSM11P83369 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.343e-13■■■■■ 63.1
LSM11P83369 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.82■□□□□ 0.445e-11■■■■■ 62.7
LSM11P83369 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.13■□□□□ 0.175e-11■■■■■ 62.7
LSM11P83369 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.06■□□□□ 0.165e-11■■■■■ 62.7
LSM11P83369 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.92□□□□□ -0.025e-11■■■■■ 62.7
LSM11P83369 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.38□□□□□ -0.115e-11■■■■■ 62.7
LSM11P83369 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.115e-11■■■■■ 62.7
LSM11P83369 TOM1L2-208ENST00000537091 1220 ntTSL 213.99□□□□□ -0.175e-11■■■■■ 62.7
LSM11P83369 TOM1L2-213ENST00000579586 453 ntTSL 413.66□□□□□ -0.225e-11■■■■■ 62.7
LSM11P83369 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC12.04□□□□□ -0.485e-11■■■■■ 62.7
LSM11P83369 COA1-212ENST00000448704 1599 ntTSL 1 (best)16.6■□□□□ 0.255e-7■■■■■ 62.3
LSM11P83369 COA1-202ENST00000310564 1085 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.045e-7■■■■■ 62.3
LSM11P83369 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC12.37□□□□□ -0.435e-7■■■■■ 62.3
LSM11P83369 COA1-206ENST00000418140 1372 ntTSL 1 (best)11.4□□□□□ -0.595e-7■■■■■ 62.3
LSM11P83369 COA1-204ENST00000415076 1737 ntTSL 310.61□□□□□ -0.715e-7■■■■■ 62.3
LSM11P83369 COA1-215ENST00000459713 574 ntTSL 310.16□□□□□ -0.785e-7■■■■■ 62.3
LSM11P83369 COA1-208ENST00000431651 720 ntAPPRIS ALT2 TSL 39.59□□□□□ -0.875e-7■■■■■ 62.3
LSM11P83369 COA1-214ENST00000457939 406 ntTSL 39.42□□□□□ -0.95e-7■■■■■ 62.3
LSM11P83369 COA1-213ENST00000451651 585 ntTSL 39.35□□□□□ -0.915e-7■■■■■ 62.3
LSM11P83369 COA1-207ENST00000420441 547 ntTSL 28.7□□□□□ -1.025e-7■■■■■ 62.3
LSM11P83369 COA1-205ENST00000415798 524 ntAPPRIS ALT2 TSL 48.49□□□□□ -1.055e-7■■■■■ 62.3
LSM11P83369 COA1-209ENST00000438444 3223 ntTSL 28.44□□□□□ -1.065e-7■■■■■ 62.3
LSM11P83369 COA1-203ENST00000395879 2448 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.085e-7■■■■■ 62.3
LSM11P83369 COA1-211ENST00000446564 1177 ntTSL 27.85□□□□□ -1.155e-7■■■■■ 62.3
LSM11P83369 COA1-210ENST00000446330 1520 ntTSL 27.58□□□□□ -1.25e-7■■■■■ 62.3
LSM11P83369 COA1-216ENST00000470156 569 ntTSL 1 (best)6.41□□□□□ -1.385e-7■■■■■ 62.3
LSM11P83369 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.33□□□□□ -1.565e-7■■■■■ 62.3
LSM11P83369 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.623e-14■■■■■ 61.7
LSM11P83369 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.75■□□□□ 0.751e-10■■■■■ 60.4
LSM11P83369 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.75■□□□□ 0.431e-10■■■■■ 60.4
LSM11P83369 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.431e-10■■■■■ 60.4
LSM11P83369 LONP1-211ENST00000590558 2884 ntTSL 515.94■□□□□ 0.141e-10■■■■■ 60.4
LSM11P83369 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.05■□□□□ 01e-10■■■■■ 60.4
LSM11P83369 LONP1-206ENST00000587552 2816 ntTSL 214.36□□□□□ -0.111e-10■■■■■ 60.4
LSM11P83369 LONP1-208ENST00000589473 793 ntTSL 313.79□□□□□ -0.21e-10■■■■■ 60.4
LSM11P83369 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.64□□□□□ -0.231e-10■■■■■ 60.4
LSM11P83369 PDLIM1-202ENST00000477757 850 ntTSL 217.91■□□□□ 0.467e-14■■■■■ 59.8
LSM11P83369 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.047e-14■■■■■ 59.8
LSM11P83369 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.3□□□□□ -0.287e-14■■■■■ 59.8
LSM11P83369 ZNF100-205ENST00000598026 588 ntTSL 411.85□□□□□ -0.517e-14■■■■■ 59.8
LSM11P83369 ZNF100-206ENST00000608416 1840 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.727e-14■■■■■ 59.8
LSM11P83369 ZNF100-203ENST00000594401 548 ntTSL 410.27□□□□□ -0.777e-14■■■■■ 59.8
LSM11P83369 ZNF100-202ENST00000358296 5745 ntTSL 1 (best) BASIC7.54□□□□□ -1.27e-14■■■■■ 59.8
LSM11P83369 ZNF638-226ENST00000494621 871 ntTSL 315.84■□□□□ 0.133e-19■■■■■ 59.4
LSM11P83369 ZNF638-206ENST00000437658 931 ntTSL 214.44□□□□□ -0.13e-19■■■■■ 59.4
LSM11P83369 ZNF638-213ENST00000466330 746 ntTSL 312.96□□□□□ -0.333e-19■■■■■ 59.4
LSM11P83369 ZNF638-216ENST00000475743 590 ntTSL 412.45□□□□□ -0.423e-19■■■■■ 59.4
LSM11P83369 ZNF638-212ENST00000464375 626 ntTSL 312.44□□□□□ -0.423e-19■■■■■ 59.4
LSM11P83369 ZNF638-214ENST00000466975 560 ntTSL 411.57□□□□□ -0.563e-19■■■■■ 59.4
LSM11P83369 ZNF638-205ENST00000417778 760 ntTSL 311.25□□□□□ -0.613e-19■■■■■ 59.4
LSM11P83369 ZNF638-204ENST00000410075 3518 ntTSL 1 (best) BASIC10.58□□□□□ -0.723e-19■■■■■ 59.4
LSM11P83369 ZNF638-207ENST00000454122 731 ntTSL 310.36□□□□□ -0.753e-19■■■■■ 59.4
LSM11P83369 ZNF638-220ENST00000487707 592 ntTSL 310.36□□□□□ -0.753e-19■■■■■ 59.4
LSM11P83369 ZNF638-209ENST00000455226 585 ntTSL 410.22□□□□□ -0.773e-19■■■■■ 59.4
LSM11P83369 ZNF638-208ENST00000454278 595 ntTSL 49.81□□□□□ -0.843e-19■■■■■ 59.4
LSM11P83369 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.53e-19■■■■■ 59.4
LSM11P83369 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.83e-19■■■■■ 59.4
LSM11P83369 TBC1D5-223ENST00000471679 435 ntTSL 420.59■□□□□ 0.893e-8■■■■■ 56.8
LSM11P83369 TBC1D5-203ENST00000414318 2088 ntTSL 518.31■□□□□ 0.523e-8■■■■■ 56.8
LSM11P83369 TBC1D5-227ENST00000485432 566 ntTSL 418.24■□□□□ 0.513e-8■■■■■ 56.8
LSM11P83369 TBC1D5-221ENST00000452492 581 ntTSL 315.96■□□□□ 0.153e-8■■■■■ 56.8
LSM11P83369 TBC1D5-205ENST00000415814 852 ntTSL 312.92□□□□□ -0.343e-8■■■■■ 56.8
LSM11P83369 TBC1D5-229ENST00000497531 672 ntTSL 312.92□□□□□ -0.343e-8■■■■■ 56.8
LSM11P83369 TBC1D5-206ENST00000423331 588 ntTSL 411.91□□□□□ -0.53e-8■■■■■ 56.8
LSM11P83369 TBC1D5-216ENST00000444471 680 ntTSL 311.56□□□□□ -0.563e-8■■■■■ 56.8
LSM11P83369 TBC1D5-226ENST00000481396 609 ntTSL 411.56□□□□□ -0.563e-8■■■■■ 56.8
LSM11P83369 TBC1D5-202ENST00000412981 592 ntTSL 311.21□□□□□ -0.613e-8■■■■■ 56.8
LSM11P83369 TBC1D5-207ENST00000425944 591 ntTSL 410.89□□□□□ -0.673e-8■■■■■ 56.8
LSM11P83369 TBC1D5-218ENST00000445294 623 ntTSL 210.73□□□□□ -0.693e-8■■■■■ 56.8
LSM11P83369 TBC1D5-204ENST00000414349 687 ntTSL 310.41□□□□□ -0.743e-8■■■■■ 56.8
LSM11P83369 TBC1D5-208ENST00000428355 757 ntTSL 310.23□□□□□ -0.773e-8■■■■■ 56.8
LSM11P83369 TBC1D5-211ENST00000430169 492 ntTSL 310.02□□□□□ -0.813e-8■■■■■ 56.8
LSM11P83369 TBC1D5-215ENST00000443499 681 ntTSL 510.02□□□□□ -0.813e-8■■■■■ 56.8
LSM11P83369 TBC1D5-220ENST00000446863 557 ntTSL 49.43□□□□□ -0.93e-8■■■■■ 56.8
LSM11P83369 TBC1D5-217ENST00000444756 545 ntTSL 49.43□□□□□ -0.93e-8■■■■■ 56.8
LSM11P83369 TBC1D5-214ENST00000443386 561 ntTSL 48.58□□□□□ -1.043e-8■■■■■ 56.8
LSM11P83369 TBC1D5-209ENST00000429383 3156 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.173e-8■■■■■ 56.8
LSM11P83369 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.523e-8■■■■■ 56.8
LSM11P83369 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.53■□□□□ 0.082e-10■■■■■ 56.8
LSM11P83369 PC-207ENST00000528403 706 ntTSL 214.31□□□□□ -0.122e-10■■■■■ 56.8
LSM11P83369 PC-212ENST00000531614 690 ntTSL 511.41□□□□□ -0.582e-10■■■■■ 56.8
LSM11P83369 PC-202ENST00000393958 4005 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.872e-10■■■■■ 56.8
LSM11P83369 PC-203ENST00000393960 4192 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.922e-10■■■■■ 56.8
LSM11P83369 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC15.98■□□□□ 0.156e-13■■■■■ 55.9
LSM11P83369 ZNF277-202ENST00000361946 1736 ntTSL 1 (best)15.1■□□□□ 0.016e-13■■■■■ 55.9
LSM11P83369 ZNF277-207ENST00000457808 891 ntTSL 513.01□□□□□ -0.336e-13■■■■■ 55.9
Retrieved 100 of 11,495 protein–RNA pairs in 304.5 ms