RNA–Protein interactions for RNA: ENST00000393958.6

PC-202, Transcript of pyruvate carboxylase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PC, Length 4,005 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PC-202ENST00000393958 NISCHQ9Y2I1 1504 aa19.74■□□□□ 0.75
PC-202ENST00000393958 DCAF8L2P0C7V8 631 aa17.95■□□□□ 0.46
PC-202ENST00000393958 SHROOM4Q9ULL8 1493 aa17.55■□□□□ 0.4
PC-202ENST00000393958 SUPT5HO00267 1087 aaKnown RBP17.42■□□□□ 0.38
PC-202ENST00000393958 ABCC9O60706 1549 aa17.33■□□□□ 0.36
PC-202ENST00000393958 PCGF6Q9BYE7 350 aa16.8■□□□□ 0.28
PC-202ENST00000393958 PABPN1Q86U42 306 aaKnown RBP eCLIP16.67■□□□□ 0.26
PC-202ENST00000393958 ZCCHC6Q5VYS8 1495 aaKnown RBP16.65■□□□□ 0.26
PC-202ENST00000393958 PPARGC1BQ86YN6 1023 aaKnown RBP16.64■□□□□ 0.25
PC-202ENST00000393958 CHIC1Q5VXU3 224 aa16.61■□□□□ 0.25
PC-202ENST00000393958 HRCP23327 699 aa16.6■□□□□ 0.25
PC-202ENST00000393958 MYO15BQ96JP2 1530 aa16.52■□□□□ 0.24
PC-202ENST00000393958 LOC105371045A0A1W2PR82 267 aa16.5■□□□□ 0.23
PC-202ENST00000393958 EHMT2Q96KQ7 1210 aa16.45■□□□□ 0.22
PC-202ENST00000393958 CCDC180Q9P1Z9 1646 aa16.4■□□□□ 0.22
PC-202ENST00000393958 FAM9AQ8IZU1 332 aaPredicted RBP16.25■□□□□ 0.19
PC-202ENST00000393958 DNAJC5BQ9UF47 199 aa16.06■□□□□ 0.16
PC-202ENST00000393958 TRIM26Q12899 539 aaPredicted RBP16.02■□□□□ 0.15
PC-202ENST00000393958 TRIM41Q8WV44 630 aa15.95■□□□□ 0.14
PC-202ENST00000393958 TTBK1Q5TCY1 1321 aaPredicted RBP15.92■□□□□ 0.14
PC-202ENST00000393958 DCAF1Q9Y4B6 1507 aa15.89■□□□□ 0.13
PC-202ENST00000393958 SCRIBQ14160 1630 aa15.88■□□□□ 0.13
PC-202ENST00000393958 RSF1Q96T23 1441 aaPredicted RBP15.8■□□□□ 0.12
PC-202ENST00000393958 RB1CC1Q8TDY2 1594 aa15.79■□□□□ 0.12
PC-202ENST00000393958 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.69■□□□□ 0.1
PC-202ENST00000393958 ZEB1P37275 1124 aaPredicted RBP15.67■□□□□ 0.1
PC-202ENST00000393958 CECR2Q9BXF3 1484 aa15.66■□□□□ 0.1
PC-202ENST00000393958 CCER1Q8TC90 406 aaPredicted RBP15.63■□□□□ 0.09
PC-202ENST00000393958 SCAF1Q9H7N4 1312 aaKnown RBP15.62■□□□□ 0.09
PC-202ENST00000393958 MROH2BQ7Z745 1585 aa15.51■□□□□ 0.07
PC-202ENST00000393958 NACADO15069 1562 aa15.47■□□□□ 0.07
PC-202ENST00000393958 YTHDC1Q96MU7 727 aaKnown RBP15.43■□□□□ 0.06
PC-202ENST00000393958 WIZO95785 1651 aa15.42■□□□□ 0.06
PC-202ENST00000393958 NEUROD1Q13562 356 aa15.39■□□□□ 0.05
PC-202ENST00000393958 RANGAP1P46060 587 aaPredicted RBP15.37■□□□□ 0.05
PC-202ENST00000393958 DIEXFQ68CQ4 756 aaKnown RBP15.35■□□□□ 0.05
PC-202ENST00000393958 PELP1Q8IZL8 1130 aaKnown RBP15.34■□□□□ 0.05
PC-202ENST00000393958 GTF3C3Q9Y5Q9 886 aa15.34■□□□□ 0.05
PC-202ENST00000393958 UBTFP17480 764 aaKnown RBP15.31■□□□□ 0.04
PC-202ENST00000393958 ACIN1Q9UKV3 1341 aaKnown RBP15.3■□□□□ 0.04
PC-202ENST00000393958 ERCC6Q03468 1493 aa15.3■□□□□ 0.04
PC-202ENST00000393958 CENPBP07199 599 aaPredicted RBP15.24■□□□□ 0.03
PC-202ENST00000393958 HNRNPUL2Q1KMD3 747 aaKnown RBP15.23■□□□□ 0.03
PC-202ENST00000393958 ABCC8Q09428 1581 aa15.23■□□□□ 0.03
PC-202ENST00000393958 FBLN2P98095 1184 aa15.2■□□□□ 0.02
PC-202ENST00000393958 CCDC88BA6NC98 1476 aa15.19■□□□□ 0.02
PC-202ENST00000393958 SOGA1O94964 1423 aa15.15■□□□□ 0.02
PC-202ENST00000393958 RUSC2Q8N2Y8 1516 aa15.11■□□□□ 0.01
PC-202ENST00000393958 BAZ1AQ9NRL2 1556 aaPredicted RBP15.08■□□□□ 0
PC-202ENST00000393958 TRHP20396 242 aaPredicted RBP15.06■□□□□ 0
PC-202ENST00000393958 ZNF316A6NFI3 1004 aaPredicted RBP15.03■□□□□ -0
PC-202ENST00000393958 CSRNP3Q8WYN3 585 aa15.03■□□□□ -0
PC-202ENST00000393958 MIER1Q8N108 512 aa15□□□□□ -0.01
PC-202ENST00000393958 CEP162Q5TB80 1403 aa15□□□□□ -0.01
PC-202ENST00000393958 APLP2Q06481 763 aa15□□□□□ -0.01
PC-202ENST00000393958 EIF4G1Q04637 1599 aaKnown RBP14.98□□□□□ -0.01
PC-202ENST00000393958 DNAJC5Q9H3Z4 198 aa14.98□□□□□ -0.01
PC-202ENST00000393958 SMARCA4P51532 1647 aa14.97□□□□□ -0.01
PC-202ENST00000393958 SMARCA2P51531 1590 aa14.97□□□□□ -0.01
PC-202ENST00000393958 TOP2AP11388 1531 aaKnown RBP14.96□□□□□ -0.01
PC-202ENST00000393958 CC2D2AQ9P2K1 1620 aa14.91□□□□□ -0.02
PC-202ENST00000393958 UNC13AQ9UPW8 1703 aa14.9□□□□□ -0.02
PC-202ENST00000393958 ITGAEP38570 1179 aa14.89□□□□□ -0.03
PC-202ENST00000393958 TNIKQ9UKE5 1360 aa14.86□□□□□ -0.03
PC-202ENST00000393958 AEBP2Q6ZN18 517 aaPredicted RBP14.83□□□□□ -0.04
PC-202ENST00000393958 WRNQ14191 1432 aaPredicted RBP eCLIP14.83□□□□□ -0.04
PC-202ENST00000393958 BICRAQ9NZM4 1560 aa14.78□□□□□ -0.04
PC-202ENST00000393958 SYNJ1O43426 1573 aa14.73□□□□□ -0.05
PC-202ENST00000393958 GOLGA3Q08378 1498 aa14.73□□□□□ -0.05
PC-202ENST00000393958 CYB5RLQ6IPT4 315 aa14.72□□□□□ -0.05
PC-202ENST00000393958 OSCARQ8IYS5 282 aa14.72□□□□□ -0.05
PC-202ENST00000393958 BAZ1BQ9UIG0 1483 aaKnown RBP14.71□□□□□ -0.05
PC-202ENST00000393958 BCANQ96GW7 911 aa14.7□□□□□ -0.06
PC-202ENST00000393958 RAPGEF2Q9Y4G8 1499 aa14.7□□□□□ -0.06
PC-202ENST00000393958 CLIP1P30622 1438 aa14.7□□□□□ -0.06
PC-202ENST00000393958 ATAD2BQ9ULI0 1458 aa14.67□□□□□ -0.06
PC-202ENST00000393958 ATP1B4Q9UN42 357 aaPredicted RBP14.66□□□□□ -0.06
PC-202ENST00000393958 EEA1Q15075 1411 aa14.65□□□□□ -0.06
PC-202ENST00000393958 KANK4Q5T7N3 995 aaPredicted RBP14.63□□□□□ -0.07
PC-202ENST00000393958 PDS5BQ9NTI5 1447 aa14.63□□□□□ -0.07
PC-202ENST00000393958 CHMP7Q8WUX9 453 aaPredicted RBP14.61□□□□□ -0.07
PC-202ENST00000393958 CEP164Q9UPV0 1460 aa14.61□□□□□ -0.07
PC-202ENST00000393958 KCNH8Q96L42 1107 aa14.57□□□□□ -0.08
PC-202ENST00000393958 HIRIP3Q9BW71 556 aaPredicted RBP14.57□□□□□ -0.08
PC-202ENST00000393958 VPS8Q8N3P4 1428 aa14.55□□□□□ -0.08
PC-202ENST00000393958 MYT1Q01538 1121 aa14.55□□□□□ -0.08
PC-202ENST00000393958 SUPT16HQ9Y5B9 1047 aaKnown RBP14.53□□□□□ -0.08
PC-202ENST00000393958 NESP48681 1621 aa14.53□□□□□ -0.08
PC-202ENST00000393958 NPM1P06748 294 aaKnown RBP eCLIP14.52□□□□□ -0.08
PC-202ENST00000393958 KIF21BO75037 1637 aa14.5□□□□□ -0.09
PC-202ENST00000393958 PEG3Q9GZU2 1588 aa14.5□□□□□ -0.09
PC-202ENST00000393958 P3H3Q8IVL6 736 aa14.49□□□□□ -0.09
PC-202ENST00000393958 DDX10Q13206 875 aaKnown RBP14.48□□□□□ -0.09
PC-202ENST00000393958 FAM50AQ14320 339 aaKnown RBP14.47□□□□□ -0.09
PC-202ENST00000393958 FKBP8Q14318 412 aa14.43□□□□□ -0.1
PC-202ENST00000393958 TRIM52Q96A61 297 aa14.42□□□□□ -0.1
PC-202ENST00000393958 CADPSQ9ULU8 1353 aa14.42□□□□□ -0.1
PC-202ENST00000393958 SIN3AQ96ST3 1273 aa14.42□□□□□ -0.1
PC-202ENST00000393958 ARAP1Q96P48 1450 aa14.41□□□□□ -0.1
PC-202ENST00000393958 DHX57Q6P158 1386 aaKnown RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms