RNA–Protein interactions for RNA: ENST00000487707.1

ZNF638-220, Transcript of zinc finger protein 638, humanhuman

TSL 3

Gene ZNF638, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF638-220ENST00000487707 NISCHQ9Y2I1 1504 aa26.87■■□□□ 1.89
ZNF638-220ENST00000487707 ABCC9O60706 1549 aa25.07■■□□□ 1.6
ZNF638-220ENST00000487707 DNAJC5BQ9UF47 199 aa24.24■■□□□ 1.47
ZNF638-220ENST00000487707 CCDC180Q9P1Z9 1646 aa24.23■■□□□ 1.47
ZNF638-220ENST00000487707 AEBP2Q6ZN18 517 aaPredicted RBP24.05■■□□□ 1.44
ZNF638-220ENST00000487707 RB1CC1Q8TDY2 1594 aa23.44■■□□□ 1.34
ZNF638-220ENST00000487707 PABPN1Q86U42 306 aaKnown RBP eCLIP23.35■■□□□ 1.33
ZNF638-220ENST00000487707 DCAF8L2P0C7V8 631 aa23.14■■□□□ 1.29
ZNF638-220ENST00000487707 NACADO15069 1562 aa23.13■■□□□ 1.29
ZNF638-220ENST00000487707 UNC13AQ9UPW8 1703 aa22.9■■□□□ 1.26
ZNF638-220ENST00000487707 CHIC1Q5VXU3 224 aa22.89■■□□□ 1.25
ZNF638-220ENST00000487707 BICRAQ9NZM4 1560 aa22.87■■□□□ 1.25
ZNF638-220ENST00000487707 CECR2Q9BXF3 1484 aa22.61■■□□□ 1.21
ZNF638-220ENST00000487707 DNAJC5Q9H3Z4 198 aa22.61■■□□□ 1.21
ZNF638-220ENST00000487707 MYO15BQ96JP2 1530 aa22.57■■□□□ 1.2
ZNF638-220ENST00000487707 CC2D2AQ9P2K1 1620 aa22.54■■□□□ 1.2
ZNF638-220ENST00000487707 SHROOM4Q9ULL8 1493 aa22.33■■□□□ 1.16
ZNF638-220ENST00000487707 EIF4G1Q04637 1599 aaKnown RBP22.33■■□□□ 1.16
ZNF638-220ENST00000487707 SCRIBQ14160 1630 aa22.19■■□□□ 1.14
ZNF638-220ENST00000487707 ZCCHC6Q5VYS8 1495 aaKnown RBP22.11■■□□□ 1.13
ZNF638-220ENST00000487707 DCAF1Q9Y4B6 1507 aa22.07■■□□□ 1.12
ZNF638-220ENST00000487707 CUX2O14529 1486 aa21.76■■□□□ 1.07
ZNF638-220ENST00000487707 ERCC6Q03468 1493 aa21.63■■□□□ 1.05
ZNF638-220ENST00000487707 NCAPD3P42695 1498 aa21.44■■□□□ 1.02
ZNF638-220ENST00000487707 TRIM41Q8WV44 630 aa21.4■■□□□ 1.02
ZNF638-220ENST00000487707 NESP48681 1621 aa21.39■■□□□ 1.01
ZNF638-220ENST00000487707 ATAD2BQ9ULI0 1458 aa21.3■■□□□ 1
ZNF638-220ENST00000487707 THOC2Q8NI27 1593 aaKnown RBP21.16■□□□□ 0.98
ZNF638-220ENST00000487707 HMGXB3Q12766 1538 aa21.14■□□□□ 0.97
ZNF638-220ENST00000487707 SMARCA2P51531 1590 aa21.11■□□□□ 0.97
ZNF638-220ENST00000487707 SMARCA4P51532 1647 aa21.06■□□□□ 0.96
ZNF638-220ENST00000487707 BAZ1BQ9UIG0 1483 aaKnown RBP21.02■□□□□ 0.96
ZNF638-220ENST00000487707 LAMC3Q9Y6N6 1575 aa20.97■□□□□ 0.95
ZNF638-220ENST00000487707 KIF21AQ7Z4S6 1674 aa20.95■□□□□ 0.94
ZNF638-220ENST00000487707 PDS5BQ9NTI5 1447 aa20.94■□□□□ 0.94
ZNF638-220ENST00000487707 BAZ1AQ9NRL2 1556 aaPredicted RBP20.85■□□□□ 0.93
ZNF638-220ENST00000487707 PEG3Q9GZU2 1588 aa20.82■□□□□ 0.92
ZNF638-220ENST00000487707 CADPSQ9ULU8 1353 aa20.79■□□□□ 0.92
ZNF638-220ENST00000487707 MRC2Q9UBG0 1479 aa20.79■□□□□ 0.92
ZNF638-220ENST00000487707 OSCARQ8IYS5 282 aa20.78■□□□□ 0.92
ZNF638-220ENST00000487707 MROH2BQ7Z745 1585 aa20.75■□□□□ 0.91
ZNF638-220ENST00000487707 WDR62O43379 1518 aa20.73■□□□□ 0.91
ZNF638-220ENST00000487707 SENP3Q9H4L4 574 aaPredicted RBP20.61■□□□□ 0.89
ZNF638-220ENST00000487707 CEP164Q9UPV0 1460 aa20.56■□□□□ 0.88
ZNF638-220ENST00000487707 FANCD2Q9BXW9 1451 aa20.53■□□□□ 0.88
ZNF638-220ENST00000487707 RIMBP3CA6NJZ7 1639 aa20.49■□□□□ 0.87
ZNF638-220ENST00000487707 RIMBP3BA6NNM3 1639 aa20.49■□□□□ 0.87
ZNF638-220ENST00000487707 RIMBP3Q9UFD9 1639 aa20.49■□□□□ 0.87
ZNF638-220ENST00000487707 WIZO95785 1651 aa20.44■□□□□ 0.86
ZNF638-220ENST00000487707 URB2Q14146 1524 aaKnown RBP20.43■□□□□ 0.86
ZNF638-220ENST00000487707 CYB5RLQ6IPT4 315 aa20.39■□□□□ 0.85
ZNF638-220ENST00000487707 CFTRP13569 1480 aa20.38■□□□□ 0.85
ZNF638-220ENST00000487707 ARHGEF11O15085 1522 aa20.37■□□□□ 0.85
ZNF638-220ENST00000487707 TRHP20396 242 aaPredicted RBP20.35■□□□□ 0.85
ZNF638-220ENST00000487707 ZNF608Q9ULD9 1512 aaPredicted RBP20.31■□□□□ 0.84
ZNF638-220ENST00000487707 PHF23Q9BUL5 403 aaPredicted RBP20.28■□□□□ 0.84
ZNF638-220ENST00000487707 IFT140Q96RY7 1462 aa20.19■□□□□ 0.82
ZNF638-220ENST00000487707 ARAP1Q96P48 1450 aa20.17■□□□□ 0.82
ZNF638-220ENST00000487707 RSF1Q96T23 1441 aaPredicted RBP20.1■□□□□ 0.81
ZNF638-220ENST00000487707 FBLN2P98095 1184 aa20.09■□□□□ 0.81
ZNF638-220ENST00000487707 TOP2AP11388 1531 aaKnown RBP20.08■□□□□ 0.81
ZNF638-220ENST00000487707 AQRO60306 1485 aaKnown RBP eCLIP20.07■□□□□ 0.81e-12■■■■■ 26.8
ZNF638-220ENST00000487707 TOPBP1Q92547 1522 aa20.07■□□□□ 0.8
ZNF638-220ENST00000487707 EIF4G3O43432 1585 aaKnown RBP20.04■□□□□ 0.8
ZNF638-220ENST00000487707 CHD1O14646 1710 aa20■□□□□ 0.79
ZNF638-220ENST00000487707 CCDC88BA6NC98 1476 aa19.96■□□□□ 0.79
ZNF638-220ENST00000487707 PRDM2Q13029 1718 aa19.93■□□□□ 0.78
ZNF638-220ENST00000487707 TARBP1Q13395 1621 aaKnown RBP19.91■□□□□ 0.78
ZNF638-220ENST00000487707 ABCC8Q09428 1581 aa19.9■□□□□ 0.78
ZNF638-220ENST00000487707 DNMBPQ6XZF7 1577 aa19.88■□□□□ 0.77
ZNF638-220ENST00000487707 TDRD9Q8NDG6 1382 aaKnown RBP19.86■□□□□ 0.77
ZNF638-220ENST00000487707 RAD54L2Q9Y4B4 1467 aa19.84■□□□□ 0.77
ZNF638-220ENST00000487707 POLA1P09884 1462 aaPredicted RBP19.82■□□□□ 0.76
ZNF638-220ENST00000487707 CLASP1Q7Z460 1538 aa19.81■□□□□ 0.76
ZNF638-220ENST00000487707 CHMP7Q8WUX9 453 aaPredicted RBP19.8■□□□□ 0.76
ZNF638-220ENST00000487707 SNAPC4Q5SXM2 1469 aa19.78■□□□□ 0.76
ZNF638-220ENST00000487707 SOGA1O94964 1423 aa19.76■□□□□ 0.75
ZNF638-220ENST00000487707 GAPVD1Q14C86 1478 aa19.68■□□□□ 0.74
ZNF638-220ENST00000487707 SYNJ1O43426 1573 aa19.68■□□□□ 0.74
ZNF638-220ENST00000487707 MAGI1Q96QZ7 1491 aaPredicted RBP19.63■□□□□ 0.73
ZNF638-220ENST00000487707 FGD5Q6ZNL6 1462 aa19.61■□□□□ 0.73
ZNF638-220ENST00000487707 SYNJ2O15056 1496 aa19.6■□□□□ 0.73
ZNF638-220ENST00000487707 GRIN2BQ13224 1484 aa19.6■□□□□ 0.73
ZNF638-220ENST00000487707 ERCC6L2Q5T890 1561 aa19.54■□□□□ 0.72
ZNF638-220ENST00000487707 WDR97A6NE52 1622 aa19.53■□□□□ 0.72
ZNF638-220ENST00000487707 CUX1P39880 1505 aa19.51■□□□□ 0.71
ZNF638-220ENST00000487707 ILDR1Q86SU0 546 aaPredicted RBP19.44■□□□□ 0.7
ZNF638-220ENST00000487707 PBRM1Q86U86 1689 aa19.4■□□□□ 0.7
ZNF638-220ENST00000487707 KDM4FA0A1W2PPD8 638 aa19.38■□□□□ 0.69
ZNF638-220ENST00000487707 CEP170Q5SW79 1584 aa19.37■□□□□ 0.69
ZNF638-220ENST00000487707 GRIN2AQ12879 1464 aa19.35■□□□□ 0.69
ZNF638-220ENST00000487707 KIF13AQ9H1H9 1805 aa19.34■□□□□ 0.69
ZNF638-220ENST00000487707 FAM69CQ0P6D2 419 aa19.33■□□□□ 0.68
ZNF638-220ENST00000487707 ABCA10Q8WWZ4 1543 aa19.32■□□□□ 0.68
ZNF638-220ENST00000487707 NUP160Q12769 1436 aa19.32■□□□□ 0.68
ZNF638-220ENST00000487707 ABCA5Q8WWZ7 1642 aa19.32■□□□□ 0.68
ZNF638-220ENST00000487707 SHROOM2Q13796 1616 aa19.25■□□□□ 0.67
ZNF638-220ENST00000487707 PRG4Q92954 1404 aaPredicted RBP19.24■□□□□ 0.67
ZNF638-220ENST00000487707 ADAMTS12P58397 1594 aa19.23■□□□□ 0.67
ZNF638-220ENST00000487707 ABCC10Q5T3U5 1492 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms