RNA–Protein interactions for RNA: ENST00000438444.5

COA1-209, Transcript of cytochrome c oxidase assembly factor 1 homolog, humanhuman

TSL 2

Gene COA1, Length 3,223 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COA1-209ENST00000438444 NISCHQ9Y2I1 1504 aa21.08■□□□□ 0.96
COA1-209ENST00000438444 CCDC180Q9P1Z9 1646 aa19.09■□□□□ 0.65
COA1-209ENST00000438444 DCAF1Q9Y4B6 1507 aa18.06■□□□□ 0.48
COA1-209ENST00000438444 MYO15BQ96JP2 1530 aa18.02■□□□□ 0.48
COA1-209ENST00000438444 ZCCHC6Q5VYS8 1495 aaKnown RBP17.84■□□□□ 0.45
COA1-209ENST00000438444 NACADO15069 1562 aa17.47■□□□□ 0.39
COA1-209ENST00000438444 RB1CC1Q8TDY2 1594 aa17.18■□□□□ 0.34
COA1-209ENST00000438444 SHROOM4Q9ULL8 1493 aa17.16■□□□□ 0.34
COA1-209ENST00000438444 UNC13AQ9UPW8 1703 aa17.05■□□□□ 0.32
COA1-209ENST00000438444 ABCC9O60706 1549 aa16.77■□□□□ 0.28
COA1-209ENST00000438444 BICRAQ9NZM4 1560 aa16.72■□□□□ 0.27
COA1-209ENST00000438444 PEG3Q9GZU2 1588 aa16.57■□□□□ 0.24
COA1-209ENST00000438444 SCRIBQ14160 1630 aa16.55■□□□□ 0.24
COA1-209ENST00000438444 BAZ1AQ9NRL2 1556 aaPredicted RBP16.34■□□□□ 0.21
COA1-209ENST00000438444 SMARCA4P51532 1647 aa16.31■□□□□ 0.2
COA1-209ENST00000438444 SMARCA2P51531 1590 aa16.28■□□□□ 0.2
COA1-209ENST00000438444 HMGXB3Q12766 1538 aa16.17■□□□□ 0.18
COA1-209ENST00000438444 TOP2AP11388 1531 aaKnown RBP16.08■□□□□ 0.16
COA1-209ENST00000438444 EIF4G1Q04637 1599 aaKnown RBP16.07■□□□□ 0.16
COA1-209ENST00000438444 PRDM2Q13029 1718 aa16.06■□□□□ 0.16
COA1-209ENST00000438444 RSF1Q96T23 1441 aaPredicted RBP16.04■□□□□ 0.16
COA1-209ENST00000438444 MROH2BQ7Z745 1585 aa16.03■□□□□ 0.16
COA1-209ENST00000438444 NCAPD3P42695 1498 aa15.95■□□□□ 0.14
COA1-209ENST00000438444 CECR2Q9BXF3 1484 aa15.93■□□□□ 0.14
COA1-209ENST00000438444 WIZO95785 1651 aa15.92■□□□□ 0.14
COA1-209ENST00000438444 ATAD2BQ9ULI0 1458 aa15.86■□□□□ 0.13
COA1-209ENST00000438444 CC2D2AQ9P2K1 1620 aa15.75■□□□□ 0.11
COA1-209ENST00000438444 BAZ1BQ9UIG0 1483 aaKnown RBP15.62■□□□□ 0.09
COA1-209ENST00000438444 DCAF8L2P0C7V8 631 aa15.61■□□□□ 0.09
COA1-209ENST00000438444 BIVM-ERCC5R4GMW8 1640 aa15.56■□□□□ 0.08
COA1-209ENST00000438444 LAMC3Q9Y6N6 1575 aa15.55■□□□□ 0.08
COA1-209ENST00000438444 CCDC88BA6NC98 1476 aa15.53■□□□□ 0.08
COA1-209ENST00000438444 CFTRP13569 1480 aa15.49■□□□□ 0.07
COA1-209ENST00000438444 WDR97A6NE52 1622 aa15.46■□□□□ 0.07
COA1-209ENST00000438444 SUPT5HO00267 1087 aaKnown RBP15.45■□□□□ 0.06
COA1-209ENST00000438444 TOP2BQ02880 1626 aa15.36■□□□□ 0.05
COA1-209ENST00000438444 PABPN1Q86U42 306 aaKnown RBP eCLIP15.33■□□□□ 0.04
COA1-209ENST00000438444 ABCC8Q09428 1581 aa15.24■□□□□ 0.03
COA1-209ENST00000438444 DNMBPQ6XZF7 1577 aa15.21■□□□□ 0.03
COA1-209ENST00000438444 CADPSQ9ULU8 1353 aa15.19■□□□□ 0.02
COA1-209ENST00000438444 THOC2Q8NI27 1593 aaKnown RBP15.18■□□□□ 0.02
COA1-209ENST00000438444 WDR62O43379 1518 aa15.17■□□□□ 0.02
COA1-209ENST00000438444 KIF21AQ7Z4S6 1674 aa15.17■□□□□ 0.02
COA1-209ENST00000438444 SYNJ1O43426 1573 aa15.15■□□□□ 0.02
COA1-209ENST00000438444 EEA1Q15075 1411 aa15.11■□□□□ 0.01
COA1-209ENST00000438444 CUX1P39880 1505 aa15.09■□□□□ 0.01
COA1-209ENST00000438444 KIF21BO75037 1637 aa15.07■□□□□ 0
COA1-209ENST00000438444 ABCA5Q8WWZ7 1642 aa15.06■□□□□ 0
COA1-209ENST00000438444 TARBP1Q13395 1621 aaKnown RBP15.05■□□□□ -0
COA1-209ENST00000438444 FANCD2Q9BXW9 1451 aa15□□□□□ -0.01
COA1-209ENST00000438444 PDS5BQ9NTI5 1447 aa15□□□□□ -0.01
COA1-209ENST00000438444 ERICH3Q5RHP9 1530 aa14.99□□□□□ -0.01
COA1-209ENST00000438444 CUL7Q14999 1698 aa14.99□□□□□ -0.01
COA1-209ENST00000438444 WRNQ14191 1432 aaPredicted RBP eCLIP14.99□□□□□ -0.01
COA1-209ENST00000438444 ABCA10Q8WWZ4 1543 aa14.98□□□□□ -0.01
COA1-209ENST00000438444 CEP164Q9UPV0 1460 aa14.98□□□□□ -0.01
COA1-209ENST00000438444 MRC2Q9UBG0 1479 aa14.96□□□□□ -0.01
COA1-209ENST00000438444 TOPBP1Q92547 1522 aa14.96□□□□□ -0.02
COA1-209ENST00000438444 URB2Q14146 1524 aaKnown RBP14.93□□□□□ -0.02
COA1-209ENST00000438444 PBRM1Q86U86 1689 aa14.91□□□□□ -0.02
COA1-209ENST00000438444 CHIC1Q5VXU3 224 aa14.9□□□□□ -0.02
COA1-209ENST00000438444 NESP48681 1621 aa14.82□□□□□ -0.04
COA1-209ENST00000438444 POLA1P09884 1462 aaPredicted RBP14.81□□□□□ -0.04
COA1-209ENST00000438444 IFT140Q96RY7 1462 aa14.8□□□□□ -0.04
COA1-209ENST00000438444 PRXQ9BXM0 1461 aa14.79□□□□□ -0.04
COA1-209ENST00000438444 FGD5Q6ZNL6 1462 aa14.79□□□□□ -0.04
COA1-209ENST00000438444 CTTNBP2Q8WZ74 1663 aa14.78□□□□□ -0.04
COA1-209ENST00000438444 CUX2O14529 1486 aa14.78□□□□□ -0.04
COA1-209ENST00000438444 ADAMTS12P58397 1594 aa14.75□□□□□ -0.05
COA1-209ENST00000438444 EIF4G3O43432 1585 aaKnown RBP14.69□□□□□ -0.06
COA1-209ENST00000438444 DNAJC5BQ9UF47 199 aa14.68□□□□□ -0.06
COA1-209ENST00000438444 KIF27Q86VH2 1401 aa14.64□□□□□ -0.07
COA1-209ENST00000438444 SAMD9Q5K651 1589 aa14.64□□□□□ -0.07
COA1-209ENST00000438444 MAGI1Q96QZ7 1491 aaPredicted RBP14.63□□□□□ -0.07
COA1-209ENST00000438444 LOC105371045A0A1W2PR82 267 aa14.63□□□□□ -0.07
COA1-209ENST00000438444 PCGF6Q9BYE7 350 aa14.63□□□□□ -0.07
COA1-209ENST00000438444 SHROOM2Q13796 1616 aa14.61□□□□□ -0.07
COA1-209ENST00000438444 GOLGA3Q08378 1498 aa14.6□□□□□ -0.07
COA1-209ENST00000438444 EFCAB5A4FU69 1503 aa14.6□□□□□ -0.07
COA1-209ENST00000438444 GRIN2BQ13224 1484 aa14.54□□□□□ -0.08
COA1-209ENST00000438444 RUSC2Q8N2Y8 1516 aa14.54□□□□□ -0.08
COA1-209ENST00000438444 MAP3K1Q13233 1512 aa14.54□□□□□ -0.08
COA1-209ENST00000438444 TNIKQ9UKE5 1360 aa14.53□□□□□ -0.08
COA1-209ENST00000438444 SOGA1O94964 1423 aa14.52□□□□□ -0.08
COA1-209ENST00000438444 HRCP23327 699 aa14.51□□□□□ -0.09
COA1-209ENST00000438444 GAPVD1Q14C86 1478 aa14.51□□□□□ -0.09
COA1-209ENST00000438444 UGGT2Q9NYU1 1516 aa14.5□□□□□ -0.09
COA1-209ENST00000438444 RAPGEF2Q9Y4G8 1499 aa14.5□□□□□ -0.09
COA1-209ENST00000438444 FHAD1B1AJZ9 1412 aa14.49□□□□□ -0.09
COA1-209ENST00000438444 IGF1RP08069 1367 aa14.49□□□□□ -0.09
COA1-209ENST00000438444 AQRO60306 1485 aaKnown RBP eCLIP14.48□□□□□ -0.094e-6■□□□□ 10.5
COA1-209ENST00000438444 CFAP43Q8NDM7 1665 aa14.46□□□□□ -0.1
COA1-209ENST00000438444 CLASP1Q7Z460 1538 aa14.45□□□□□ -0.1
COA1-209ENST00000438444 NUP160Q12769 1436 aa14.45□□□□□ -0.1
COA1-209ENST00000438444 SYNJ2O15056 1496 aa14.44□□□□□ -0.1
COA1-209ENST00000438444 PPARGC1BQ86YN6 1023 aaKnown RBP14.43□□□□□ -0.1
COA1-209ENST00000438444 RAD54L2Q9Y4B4 1467 aa14.43□□□□□ -0.1
COA1-209ENST00000438444 ERCC6Q03468 1493 aa14.42□□□□□ -0.1
COA1-209ENST00000438444 TRIM41Q8WV44 630 aa14.41□□□□□ -0.1
COA1-209ENST00000438444 CHD1O14646 1710 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms