RNA–Protein interactions for RNA: ENST00000446330.6

COA1-210, Transcript of cytochrome c oxidase assembly factor 1 homolog, humanhuman

TSL 2

Gene COA1, Length 1,520 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COA1-210ENST00000446330 NISCHQ9Y2I1 1504 aa18.03■□□□□ 0.48
COA1-210ENST00000446330 AEBP2Q6ZN18 517 aaPredicted RBP17.77■□□□□ 0.44
COA1-210ENST00000446330 CHIC1Q5VXU3 224 aa16.89■□□□□ 0.29
COA1-210ENST00000446330 CCDC180Q9P1Z9 1646 aa15.72■□□□□ 0.11
COA1-210ENST00000446330 ABCC9O60706 1549 aa15.55■□□□□ 0.08
COA1-210ENST00000446330 SENP3Q9H4L4 574 aaPredicted RBP15.48■□□□□ 0.07
COA1-210ENST00000446330 ZCCHC6Q5VYS8 1495 aaKnown RBP15.17■□□□□ 0.02
COA1-210ENST00000446330 PHF23Q9BUL5 403 aaPredicted RBP15.12■□□□□ 0.01
COA1-210ENST00000446330 DNAJC5BQ9UF47 199 aa15.12■□□□□ 0.01
COA1-210ENST00000446330 DCAF1Q9Y4B6 1507 aa14.87□□□□□ -0.03
COA1-210ENST00000446330 DCAF8L2P0C7V8 631 aa14.79□□□□□ -0.04
COA1-210ENST00000446330 SHROOM4Q9ULL8 1493 aa14.76□□□□□ -0.05
COA1-210ENST00000446330 MYO15BQ96JP2 1530 aa14.65□□□□□ -0.06
COA1-210ENST00000446330 NACADO15069 1562 aa14.57□□□□□ -0.08
COA1-210ENST00000446330 RB1CC1Q8TDY2 1594 aa14.56□□□□□ -0.08
COA1-210ENST00000446330 SCRIBQ14160 1630 aa14.5□□□□□ -0.09
COA1-210ENST00000446330 PABPN1Q86U42 306 aaKnown RBP eCLIP14.47□□□□□ -0.09
COA1-210ENST00000446330 POTEDQ86YR6 584 aa14.37□□□□□ -0.11
COA1-210ENST00000446330 FOXD1Q16676 465 aa14.36□□□□□ -0.11
COA1-210ENST00000446330 UNC13AQ9UPW8 1703 aa14.34□□□□□ -0.11
COA1-210ENST00000446330 DNAJC5Q9H3Z4 198 aa14.25□□□□□ -0.13
COA1-210ENST00000446330 SUPT5HO00267 1087 aaKnown RBP14.16□□□□□ -0.14
COA1-210ENST00000446330 BICRAQ9NZM4 1560 aa14.14□□□□□ -0.15
COA1-210ENST00000446330 CECR2Q9BXF3 1484 aa14.08□□□□□ -0.16
COA1-210ENST00000446330 RSF1Q96T23 1441 aaPredicted RBP14□□□□□ -0.17
COA1-210ENST00000446330 CC2D2AQ9P2K1 1620 aa13.99□□□□□ -0.17
COA1-210ENST00000446330 MROH2BQ7Z745 1585 aa13.97□□□□□ -0.17
COA1-210ENST00000446330 WIZO95785 1651 aa13.9□□□□□ -0.18
COA1-210ENST00000446330 BAZ1AQ9NRL2 1556 aaPredicted RBP13.89□□□□□ -0.19
COA1-210ENST00000446330 SMARCA4P51532 1647 aa13.89□□□□□ -0.19
COA1-210ENST00000446330 MSH5O43196 834 aa13.85□□□□□ -0.19
COA1-210ENST00000446330 EIF4G1Q04637 1599 aaKnown RBP13.84□□□□□ -0.19
COA1-210ENST00000446330 TOP2AP11388 1531 aaKnown RBP13.69□□□□□ -0.22
COA1-210ENST00000446330 PEG3Q9GZU2 1588 aa13.69□□□□□ -0.22
COA1-210ENST00000446330 CUX2O14529 1486 aa13.61□□□□□ -0.23
COA1-210ENST00000446330 SMARCA2P51531 1590 aa13.6□□□□□ -0.23
COA1-210ENST00000446330 ATAD2BQ9ULI0 1458 aa13.59□□□□□ -0.23
COA1-210ENST00000446330 CCDC88BA6NC98 1476 aa13.54□□□□□ -0.24
COA1-210ENST00000446330 BAZ1BQ9UIG0 1483 aaKnown RBP13.5□□□□□ -0.25
COA1-210ENST00000446330 ERCC6Q03468 1493 aa13.46□□□□□ -0.25
COA1-210ENST00000446330 HMGXB3Q12766 1538 aa13.46□□□□□ -0.26
COA1-210ENST00000446330 NCAPD3P42695 1498 aa13.44□□□□□ -0.26
COA1-210ENST00000446330 PIAS4Q8N2W9 510 aaPredicted RBP13.41□□□□□ -0.26
COA1-210ENST00000446330 TRIM41Q8WV44 630 aa13.4□□□□□ -0.26
COA1-210ENST00000446330 ABCC8Q09428 1581 aa13.34□□□□□ -0.27
COA1-210ENST00000446330 PRDM2Q13029 1718 aa13.23□□□□□ -0.29
COA1-210ENST00000446330 NESP48681 1621 aa13.21□□□□□ -0.29
COA1-210ENST00000446330 SYNJ1O43426 1573 aa13.18□□□□□ -0.3
COA1-210ENST00000446330 CFTRP13569 1480 aa13.17□□□□□ -0.3
COA1-210ENST00000446330 WRNQ14191 1432 aaPredicted RBP eCLIP13.14□□□□□ -0.31
COA1-210ENST00000446330 THOC2Q8NI27 1593 aaKnown RBP13.12□□□□□ -0.31
COA1-210ENST00000446330 LOC105371045A0A1W2PR82 267 aa13.11□□□□□ -0.31
COA1-210ENST00000446330 BIVM-ERCC5R4GMW8 1640 aa13.11□□□□□ -0.31
COA1-210ENST00000446330 TOP2BQ02880 1626 aa13.09□□□□□ -0.31
COA1-210ENST00000446330 CADPSQ9ULU8 1353 aa13.09□□□□□ -0.31
COA1-210ENST00000446330 FAM9AQ8IZU1 332 aaPredicted RBP13.08□□□□□ -0.31
COA1-210ENST00000446330 CUX1P39880 1505 aa13.06□□□□□ -0.32
COA1-210ENST00000446330 SOGA1O94964 1423 aa13.05□□□□□ -0.32
COA1-210ENST00000446330 RUSC2Q8N2Y8 1516 aa13.04□□□□□ -0.32
COA1-210ENST00000446330 PDS5BQ9NTI5 1447 aa13.02□□□□□ -0.32
COA1-210ENST00000446330 LAMC3Q9Y6N6 1575 aa13.02□□□□□ -0.33
COA1-210ENST00000446330 OSCARQ8IYS5 282 aa12.99□□□□□ -0.33
COA1-210ENST00000446330 PLPPR3Q6T4P5 718 aa12.98□□□□□ -0.33
COA1-210ENST00000446330 FANCD2Q9BXW9 1451 aa12.97□□□□□ -0.33
COA1-210ENST00000446330 KIF21AQ7Z4S6 1674 aa12.95□□□□□ -0.34
COA1-210ENST00000446330 EHMT2Q96KQ7 1210 aa12.93□□□□□ -0.34
COA1-210ENST00000446330 EEA1Q15075 1411 aa12.93□□□□□ -0.34
COA1-210ENST00000446330 ADRA2BP18089 450 aa12.91□□□□□ -0.34
COA1-210ENST00000446330 PPP6R1Q9UPN7 881 aa12.9□□□□□ -0.34
COA1-210ENST00000446330 MRC2Q9UBG0 1479 aa12.9□□□□□ -0.34
COA1-210ENST00000446330 DNMBPQ6XZF7 1577 aa12.89□□□□□ -0.35
COA1-210ENST00000446330 FGD5Q6ZNL6 1462 aa12.88□□□□□ -0.35
COA1-210ENST00000446330 CEP164Q9UPV0 1460 aa12.88□□□□□ -0.35
COA1-210ENST00000446330 KIF21BO75037 1637 aa12.86□□□□□ -0.35
COA1-210ENST00000446330 WDR62O43379 1518 aa12.86□□□□□ -0.35
COA1-210ENST00000446330 URB2Q14146 1524 aaKnown RBP12.86□□□□□ -0.35
COA1-210ENST00000446330 TOPBP1Q92547 1522 aa12.86□□□□□ -0.35
COA1-210ENST00000446330 CSRNP3Q8WYN3 585 aa12.86□□□□□ -0.35
COA1-210ENST00000446330 WDR97A6NE52 1622 aa12.81□□□□□ -0.36
COA1-210ENST00000446330 POLA1P09884 1462 aaPredicted RBP12.81□□□□□ -0.36
COA1-210ENST00000446330 GOLGA3Q08378 1498 aa12.8□□□□□ -0.36
COA1-210ENST00000446330 RAD54L2Q9Y4B4 1467 aa12.78□□□□□ -0.36
COA1-210ENST00000446330 RAPGEF2Q9Y4G8 1499 aa12.78□□□□□ -0.36
COA1-210ENST00000446330 KIF27Q86VH2 1401 aa12.77□□□□□ -0.37
COA1-210ENST00000446330 TNIKQ9UKE5 1360 aa12.76□□□□□ -0.37
COA1-210ENST00000446330 PRXQ9BXM0 1461 aa12.76□□□□□ -0.37
COA1-210ENST00000446330 RIMBP3CA6NJZ7 1639 aa12.75□□□□□ -0.37
COA1-210ENST00000446330 RIMBP3BA6NNM3 1639 aa12.75□□□□□ -0.37
COA1-210ENST00000446330 RIMBP3Q9UFD9 1639 aa12.75□□□□□ -0.37
COA1-210ENST00000446330 ABCA10Q8WWZ4 1543 aa12.74□□□□□ -0.37
COA1-210ENST00000446330 TRHP20396 242 aaPredicted RBP12.73□□□□□ -0.37
COA1-210ENST00000446330 ERICH3Q5RHP9 1530 aa12.73□□□□□ -0.37
COA1-210ENST00000446330 CEP162Q5TB80 1403 aa12.72□□□□□ -0.37
COA1-210ENST00000446330 CYB5RLQ6IPT4 315 aa12.72□□□□□ -0.37
COA1-210ENST00000446330 TARBP1Q13395 1621 aaKnown RBP12.71□□□□□ -0.37
COA1-210ENST00000446330 ABCA5Q8WWZ7 1642 aa12.7□□□□□ -0.38
COA1-210ENST00000446330 IGF1RP08069 1367 aa12.68□□□□□ -0.38
COA1-210ENST00000446330 UBTFP17480 764 aaKnown RBP12.68□□□□□ -0.38
COA1-210ENST00000446330 ARHGEF11O15085 1522 aa12.68□□□□□ -0.38
COA1-210ENST00000446330 PBRM1Q86U86 1689 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms