Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 SUDS3P1-201ENST00000505831 966 ntBASIC21.2■□□□□ 0.98
CTSFQ9UBX1 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.2■□□□□ 0.98
CTSFQ9UBX1 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CTSFQ9UBX1 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CTSFQ9UBX1 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.2■□□□□ 0.98
CTSFQ9UBX1 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CTSFQ9UBX1 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CTSFQ9UBX1 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CTSFQ9UBX1 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CTSFQ9UBX1 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CTSFQ9UBX1 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CTSFQ9UBX1 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CTSFQ9UBX1 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CTSFQ9UBX1 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.19■□□□□ 0.98
CTSFQ9UBX1 AF213884.3-201ENST00000563833 479 ntBASIC21.19■□□□□ 0.98
CTSFQ9UBX1 MIR3181-201ENST00000578512 73 ntBASIC21.19■□□□□ 0.98
CTSFQ9UBX1 AL138724.1-201ENST00000606771 1088 ntBASIC21.19■□□□□ 0.98
CTSFQ9UBX1 AC011298.3-201ENST00000615796 283 ntBASIC21.19■□□□□ 0.98
CTSFQ9UBX1 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.19■□□□□ 0.98
CTSFQ9UBX1 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CTSFQ9UBX1 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.19■□□□□ 0.98
CTSFQ9UBX1 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CTSFQ9UBX1 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CTSFQ9UBX1 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CTSFQ9UBX1 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CTSFQ9UBX1 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CTSFQ9UBX1 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.18■□□□□ 0.98
CTSFQ9UBX1 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.18■□□□□ 0.98
CTSFQ9UBX1 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
CTSFQ9UBX1 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CTSFQ9UBX1 MIR935-201ENST00000401179 91 ntBASIC21.18■□□□□ 0.98
CTSFQ9UBX1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.18■□□□□ 0.98
CTSFQ9UBX1 AP001330.3-201ENST00000520123 633 ntBASIC21.18■□□□□ 0.98
CTSFQ9UBX1 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.18■□□□□ 0.98
CTSFQ9UBX1 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CTSFQ9UBX1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CTSFQ9UBX1 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CTSFQ9UBX1 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.17■□□□□ 0.98
CTSFQ9UBX1 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CTSFQ9UBX1 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CTSFQ9UBX1 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CTSFQ9UBX1 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CTSFQ9UBX1 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
CTSFQ9UBX1 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CTSFQ9UBX1 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CTSFQ9UBX1 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CTSFQ9UBX1 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CTSFQ9UBX1 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CTSFQ9UBX1 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.16■□□□□ 0.98
CTSFQ9UBX1 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTSFQ9UBX1 ABCB10P4-201ENST00000566803 2184 ntBASIC21.16■□□□□ 0.98
CTSFQ9UBX1 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.16■□□□□ 0.98
CTSFQ9UBX1 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CTSFQ9UBX1 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
CTSFQ9UBX1 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CTSFQ9UBX1 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CTSFQ9UBX1 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.16■□□□□ 0.98
CTSFQ9UBX1 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.16■□□□□ 0.98
CTSFQ9UBX1 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.16■□□□□ 0.98
CTSFQ9UBX1 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTSFQ9UBX1 MIR939-201ENST00000401314 82 ntBASIC21.15■□□□□ 0.98
CTSFQ9UBX1 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.15■□□□□ 0.98
CTSFQ9UBX1 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.15■□□□□ 0.98
CTSFQ9UBX1 pRNA.6-201ENST00000610482 90 ntBASIC21.15■□□□□ 0.98
CTSFQ9UBX1 pRNA.5-201ENST00000612139 90 ntBASIC21.15■□□□□ 0.98
CTSFQ9UBX1 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
CTSFQ9UBX1 pRNA.11-201ENST00000618423 90 ntBASIC21.15■□□□□ 0.98
CTSFQ9UBX1 pRNA.13-201ENST00000619112 90 ntBASIC21.15■□□□□ 0.98
CTSFQ9UBX1 AC136469.2-201ENST00000623944 1028 ntBASIC21.15■□□□□ 0.98
CTSFQ9UBX1 AL136967.2-201ENST00000623968 743 ntBASIC21.15■□□□□ 0.98
CTSFQ9UBX1 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTSFQ9UBX1 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTSFQ9UBX1 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTSFQ9UBX1 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
CTSFQ9UBX1 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CTSFQ9UBX1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.14■□□□□ 0.98
CTSFQ9UBX1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
CTSFQ9UBX1 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.14■□□□□ 0.97
CTSFQ9UBX1 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.14■□□□□ 0.97
CTSFQ9UBX1 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CTSFQ9UBX1 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.14■□□□□ 0.97
CTSFQ9UBX1 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.14■□□□□ 0.97
CTSFQ9UBX1 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CTSFQ9UBX1 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CTSFQ9UBX1 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CTSFQ9UBX1 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.13■□□□□ 0.97
CTSFQ9UBX1 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTSFQ9UBX1 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CTSFQ9UBX1 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CTSFQ9UBX1 ZNRF2P3-201ENST00000424200 374 ntBASIC21.13■□□□□ 0.97
CTSFQ9UBX1 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.13■□□□□ 0.97
CTSFQ9UBX1 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.13■□□□□ 0.97
CTSFQ9UBX1 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CTSFQ9UBX1 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTSFQ9UBX1 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
CTSFQ9UBX1 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTSFQ9UBX1 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTSFQ9UBX1 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
CTSFQ9UBX1 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CTSFQ9UBX1 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms