Protein–RNA interactions for Protein: Q9C098

DCLK3, Serine/threonine-protein kinase DCLK3, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK3Q9C098 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.8■■□□□ 1.4
DCLK3Q9C098 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
DCLK3Q9C098 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.8■■□□□ 1.4
DCLK3Q9C098 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.8■■□□□ 1.4
DCLK3Q9C098 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.8■■□□□ 1.4
DCLK3Q9C098 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC23.8■■□□□ 1.4
DCLK3Q9C098 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
DCLK3Q9C098 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
DCLK3Q9C098 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
DCLK3Q9C098 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
DCLK3Q9C098 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.79■■□□□ 1.4
DCLK3Q9C098 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
DCLK3Q9C098 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
DCLK3Q9C098 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
DCLK3Q9C098 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
DCLK3Q9C098 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
DCLK3Q9C098 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.78■■□□□ 1.4
DCLK3Q9C098 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
DCLK3Q9C098 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
DCLK3Q9C098 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.78■■□□□ 1.4
DCLK3Q9C098 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
DCLK3Q9C098 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.4
DCLK3Q9C098 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
DCLK3Q9C098 EI24-213ENST00000618552 1747 ntTSL 5 BASIC23.78■■□□□ 1.4
DCLK3Q9C098 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC23.78■■□□□ 1.4
DCLK3Q9C098 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
DCLK3Q9C098 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
DCLK3Q9C098 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
DCLK3Q9C098 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
DCLK3Q9C098 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
DCLK3Q9C098 AL136116.3-201ENST00000402907 1138 ntBASIC23.77■■□□□ 1.4
DCLK3Q9C098 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
DCLK3Q9C098 AL512631.2-201ENST00000604634 923 ntBASIC23.77■■□□□ 1.4
DCLK3Q9C098 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
DCLK3Q9C098 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
DCLK3Q9C098 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
DCLK3Q9C098 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
DCLK3Q9C098 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
DCLK3Q9C098 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.77■■□□□ 1.4
DCLK3Q9C098 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
DCLK3Q9C098 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
DCLK3Q9C098 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
DCLK3Q9C098 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
DCLK3Q9C098 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC23.76■■□□□ 1.39
DCLK3Q9C098 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
DCLK3Q9C098 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
DCLK3Q9C098 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.76■■□□□ 1.39
DCLK3Q9C098 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.76■■□□□ 1.39
DCLK3Q9C098 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.76■■□□□ 1.39
DCLK3Q9C098 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
DCLK3Q9C098 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.76■■□□□ 1.39
DCLK3Q9C098 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
DCLK3Q9C098 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
DCLK3Q9C098 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
DCLK3Q9C098 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
DCLK3Q9C098 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
DCLK3Q9C098 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.75■■□□□ 1.39
DCLK3Q9C098 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.75■■□□□ 1.39
DCLK3Q9C098 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
DCLK3Q9C098 MTURN-203ENST00000409688 843 ntTSL 2 BASIC23.75■■□□□ 1.39
DCLK3Q9C098 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC23.75■■□□□ 1.39
DCLK3Q9C098 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.75■■□□□ 1.39
DCLK3Q9C098 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
DCLK3Q9C098 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
DCLK3Q9C098 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
DCLK3Q9C098 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
DCLK3Q9C098 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
DCLK3Q9C098 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC23.74■■□□□ 1.39
DCLK3Q9C098 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
DCLK3Q9C098 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.74■■□□□ 1.39
DCLK3Q9C098 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
DCLK3Q9C098 ANOS2P-203ENST00000472227 1816 ntBASIC23.74■■□□□ 1.39
DCLK3Q9C098 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
DCLK3Q9C098 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
DCLK3Q9C098 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.74■■□□□ 1.39
DCLK3Q9C098 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
DCLK3Q9C098 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
DCLK3Q9C098 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
DCLK3Q9C098 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
DCLK3Q9C098 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
DCLK3Q9C098 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
DCLK3Q9C098 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
DCLK3Q9C098 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.73■■□□□ 1.39
DCLK3Q9C098 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.73■■□□□ 1.39
DCLK3Q9C098 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
DCLK3Q9C098 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
DCLK3Q9C098 MIR4466-201ENST00000606121 54 ntBASIC23.73■■□□□ 1.39
DCLK3Q9C098 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
DCLK3Q9C098 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.73■■□□□ 1.39
DCLK3Q9C098 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.73■■□□□ 1.39
DCLK3Q9C098 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.73■■□□□ 1.39
DCLK3Q9C098 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
DCLK3Q9C098 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
DCLK3Q9C098 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
DCLK3Q9C098 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
DCLK3Q9C098 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
DCLK3Q9C098 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.72■■□□□ 1.39
DCLK3Q9C098 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
DCLK3Q9C098 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
DCLK3Q9C098 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms