Protein–RNA interactions for Protein: Q6P3X8

PGBD2, PiggyBac transposable element-derived protein 2, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2Q6P3X8 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PGBD2Q6P3X8 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
PGBD2Q6P3X8 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PGBD2Q6P3X8 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PGBD2Q6P3X8 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PGBD2Q6P3X8 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PGBD2Q6P3X8 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
PGBD2Q6P3X8 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.6■□□□□ 0.89
PGBD2Q6P3X8 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PGBD2Q6P3X8 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PGBD2Q6P3X8 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.6■□□□□ 0.89
PGBD2Q6P3X8 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PGBD2Q6P3X8 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PGBD2Q6P3X8 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
PGBD2Q6P3X8 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.59■□□□□ 0.89
PGBD2Q6P3X8 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PGBD2Q6P3X8 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.59■□□□□ 0.89
PGBD2Q6P3X8 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PGBD2Q6P3X8 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PGBD2Q6P3X8 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PGBD2Q6P3X8 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
PGBD2Q6P3X8 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PGBD2Q6P3X8 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PGBD2Q6P3X8 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.58■□□□□ 0.89
PGBD2Q6P3X8 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PGBD2Q6P3X8 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PGBD2Q6P3X8 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PGBD2Q6P3X8 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PGBD2Q6P3X8 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PGBD2Q6P3X8 KRT18P60-201ENST00000312876 1297 ntBASIC20.58■□□□□ 0.89
PGBD2Q6P3X8 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PGBD2Q6P3X8 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PGBD2Q6P3X8 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.58■□□□□ 0.89
PGBD2Q6P3X8 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PGBD2Q6P3X8 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.58■□□□□ 0.89
PGBD2Q6P3X8 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PGBD2Q6P3X8 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.88
PGBD2Q6P3X8 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
PGBD2Q6P3X8 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PGBD2Q6P3X8 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PGBD2Q6P3X8 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PGBD2Q6P3X8 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
PGBD2Q6P3X8 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PGBD2Q6P3X8 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PGBD2Q6P3X8 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
PGBD2Q6P3X8 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PGBD2Q6P3X8 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.57■□□□□ 0.88
PGBD2Q6P3X8 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PGBD2Q6P3X8 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
PGBD2Q6P3X8 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.57■□□□□ 0.88
PGBD2Q6P3X8 AC022616.5-201ENST00000518796 181 ntBASIC20.57■□□□□ 0.88
PGBD2Q6P3X8 AC019171.1-201ENST00000601251 1056 ntBASIC20.57■□□□□ 0.88
PGBD2Q6P3X8 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PGBD2Q6P3X8 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PGBD2Q6P3X8 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PGBD2Q6P3X8 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
PGBD2Q6P3X8 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PGBD2Q6P3X8 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.56■□□□□ 0.88
PGBD2Q6P3X8 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PGBD2Q6P3X8 AC079630.1-202ENST00000618127 1840 ntBASIC20.56■□□□□ 0.88
PGBD2Q6P3X8 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PGBD2Q6P3X8 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.56■□□□□ 0.88
PGBD2Q6P3X8 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PGBD2Q6P3X8 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.56■□□□□ 0.88
PGBD2Q6P3X8 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PGBD2Q6P3X8 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
PGBD2Q6P3X8 AC127496.7-201ENST00000625110 1798 ntBASIC20.56■□□□□ 0.88
PGBD2Q6P3X8 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PGBD2Q6P3X8 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PGBD2Q6P3X8 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.55■□□□□ 0.88
PGBD2Q6P3X8 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.55■□□□□ 0.88
PGBD2Q6P3X8 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PGBD2Q6P3X8 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PGBD2Q6P3X8 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.55■□□□□ 0.88
PGBD2Q6P3X8 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PGBD2Q6P3X8 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PGBD2Q6P3X8 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PGBD2Q6P3X8 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PGBD2Q6P3X8 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.55■□□□□ 0.88
PGBD2Q6P3X8 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PGBD2Q6P3X8 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
PGBD2Q6P3X8 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PGBD2Q6P3X8 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.54■□□□□ 0.88
PGBD2Q6P3X8 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.54■□□□□ 0.88
PGBD2Q6P3X8 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PGBD2Q6P3X8 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PGBD2Q6P3X8 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.53■□□□□ 0.88
PGBD2Q6P3X8 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.53■□□□□ 0.88
PGBD2Q6P3X8 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PGBD2Q6P3X8 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PGBD2Q6P3X8 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
PGBD2Q6P3X8 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.53■□□□□ 0.88
PGBD2Q6P3X8 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PGBD2Q6P3X8 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PGBD2Q6P3X8 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PGBD2Q6P3X8 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PGBD2Q6P3X8 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PGBD2Q6P3X8 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.52■□□□□ 0.88
PGBD2Q6P3X8 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.52■□□□□ 0.88
PGBD2Q6P3X8 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms