Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ODF4Q2M2E3 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
ODF4Q2M2E3 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
ODF4Q2M2E3 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.82■□□□□ 0.76
ODF4Q2M2E3 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
ODF4Q2M2E3 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ODF4Q2M2E3 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ODF4Q2M2E3 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ODF4Q2M2E3 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.82■□□□□ 0.76
ODF4Q2M2E3 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
ODF4Q2M2E3 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.81■□□□□ 0.76
ODF4Q2M2E3 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ODF4Q2M2E3 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ODF4Q2M2E3 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ODF4Q2M2E3 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ODF4Q2M2E3 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.81■□□□□ 0.76
ODF4Q2M2E3 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.81■□□□□ 0.76
ODF4Q2M2E3 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ODF4Q2M2E3 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ODF4Q2M2E3 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.8■□□□□ 0.76
ODF4Q2M2E3 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ODF4Q2M2E3 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ODF4Q2M2E3 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.8■□□□□ 0.76
ODF4Q2M2E3 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ODF4Q2M2E3 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ODF4Q2M2E3 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ODF4Q2M2E3 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.8■□□□□ 0.76
ODF4Q2M2E3 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.8■□□□□ 0.76
ODF4Q2M2E3 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ODF4Q2M2E3 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.8■□□□□ 0.76
ODF4Q2M2E3 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
ODF4Q2M2E3 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ODF4Q2M2E3 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ODF4Q2M2E3 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ODF4Q2M2E3 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.79■□□□□ 0.76
ODF4Q2M2E3 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
ODF4Q2M2E3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ODF4Q2M2E3 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ODF4Q2M2E3 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ODF4Q2M2E3 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ODF4Q2M2E3 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ODF4Q2M2E3 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ODF4Q2M2E3 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ODF4Q2M2E3 ABHD17AP5-201ENST00000580133 923 ntBASIC19.78■□□□□ 0.76
ODF4Q2M2E3 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.78■□□□□ 0.76
ODF4Q2M2E3 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ODF4Q2M2E3 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ODF4Q2M2E3 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ODF4Q2M2E3 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ODF4Q2M2E3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ODF4Q2M2E3 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ODF4Q2M2E3 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ODF4Q2M2E3 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ODF4Q2M2E3 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ODF4Q2M2E3 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
ODF4Q2M2E3 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ODF4Q2M2E3 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ODF4Q2M2E3 NTF6A-201ENST00000591175 560 ntBASIC19.77■□□□□ 0.76
ODF4Q2M2E3 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ODF4Q2M2E3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
ODF4Q2M2E3 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
ODF4Q2M2E3 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.77■□□□□ 0.75
ODF4Q2M2E3 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
ODF4Q2M2E3 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
ODF4Q2M2E3 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ODF4Q2M2E3 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
ODF4Q2M2E3 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ODF4Q2M2E3 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ODF4Q2M2E3 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.76■□□□□ 0.75
ODF4Q2M2E3 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.76■□□□□ 0.75
ODF4Q2M2E3 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
ODF4Q2M2E3 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.76■□□□□ 0.75
ODF4Q2M2E3 AC120024.1-201ENST00000562672 995 ntBASIC19.76■□□□□ 0.75
ODF4Q2M2E3 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ODF4Q2M2E3 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ODF4Q2M2E3 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.76■□□□□ 0.75
ODF4Q2M2E3 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ODF4Q2M2E3 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ODF4Q2M2E3 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.75■□□□□ 0.75
ODF4Q2M2E3 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ODF4Q2M2E3 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ODF4Q2M2E3 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ODF4Q2M2E3 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
ODF4Q2M2E3 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.75■□□□□ 0.75
ODF4Q2M2E3 AC022616.5-201ENST00000518796 181 ntBASIC19.75■□□□□ 0.75
ODF4Q2M2E3 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.75■□□□□ 0.75
ODF4Q2M2E3 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
ODF4Q2M2E3 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ODF4Q2M2E3 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ODF4Q2M2E3 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ODF4Q2M2E3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ODF4Q2M2E3 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ODF4Q2M2E3 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.74■□□□□ 0.75
ODF4Q2M2E3 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
ODF4Q2M2E3 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ODF4Q2M2E3 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ODF4Q2M2E3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
ODF4Q2M2E3 AC019171.1-201ENST00000601251 1056 ntBASIC19.74■□□□□ 0.75
ODF4Q2M2E3 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.74■□□□□ 0.75
ODF4Q2M2E3 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms