Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 GUSBP5-202ENST00000510805 1989 ntBASIC22.61■■□□□ 1.21
CCNFP41002 EI24-204ENST00000527235 1625 ntTSL 5 BASIC22.61■■□□□ 1.21
CCNFP41002 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CCNFP41002 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CCNFP41002 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
CCNFP41002 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CCNFP41002 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.61■■□□□ 1.21
CCNFP41002 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
CCNFP41002 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CCNFP41002 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CCNFP41002 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC22.61■■□□□ 1.21
CCNFP41002 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
CCNFP41002 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
CCNFP41002 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CCNFP41002 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.6■■□□□ 1.21
CCNFP41002 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
CCNFP41002 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CCNFP41002 LINC00565-201ENST00000562710 2331 ntBASIC22.6■■□□□ 1.21
CCNFP41002 AC131274.2-201ENST00000580697 1507 ntBASIC22.6■■□□□ 1.21
CCNFP41002 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
CCNFP41002 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CCNFP41002 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.6■■□□□ 1.21
CCNFP41002 ECEL1P1-201ENST00000373592 1742 ntBASIC22.6■■□□□ 1.21
CCNFP41002 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CCNFP41002 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CCNFP41002 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CCNFP41002 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
CCNFP41002 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CCNFP41002 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CCNFP41002 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22.58■■□□□ 1.21
CCNFP41002 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
CCNFP41002 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC22.58■■□□□ 1.21
CCNFP41002 PRTG-204ENST00000561292 833 ntTSL 3 BASIC22.58■■□□□ 1.21
CCNFP41002 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CCNFP41002 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
CCNFP41002 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC22.58■■□□□ 1.2
CCNFP41002 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CCNFP41002 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CCNFP41002 ALDH1A3-203ENST00000557963 1670 ntBASIC22.58■■□□□ 1.2
CCNFP41002 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.58■■□□□ 1.2
CCNFP41002 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCNFP41002 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.57■■□□□ 1.2
CCNFP41002 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22.57■■□□□ 1.2
CCNFP41002 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCNFP41002 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCNFP41002 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
CCNFP41002 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
CCNFP41002 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCNFP41002 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCNFP41002 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CCNFP41002 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCNFP41002 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CCNFP41002 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CCNFP41002 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC22.56■■□□□ 1.2
CCNFP41002 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.56■■□□□ 1.2
CCNFP41002 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCNFP41002 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
CCNFP41002 AC137630.3-201ENST00000607245 391 ntBASIC22.56■■□□□ 1.2
CCNFP41002 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCNFP41002 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CCNFP41002 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.56■■□□□ 1.2
CCNFP41002 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCNFP41002 LSR-203ENST00000360798 1963 ntTSL 2 BASIC22.56■■□□□ 1.2
CCNFP41002 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.55■■□□□ 1.2
CCNFP41002 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCNFP41002 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
CCNFP41002 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC22.55■■□□□ 1.2
CCNFP41002 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CCNFP41002 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCNFP41002 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CCNFP41002 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.55■■□□□ 1.2
CCNFP41002 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.55■■□□□ 1.2
CCNFP41002 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC22.55■■□□□ 1.2
CCNFP41002 AF131216.4-201ENST00000638924 1588 ntBASIC22.55■■□□□ 1.2
CCNFP41002 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCNFP41002 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCNFP41002 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCNFP41002 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CCNFP41002 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
CCNFP41002 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
CCNFP41002 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC22.54■■□□□ 1.2
CCNFP41002 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCNFP41002 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
CCNFP41002 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCNFP41002 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CCNFP41002 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CCNFP41002 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
CCNFP41002 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
CCNFP41002 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
CCNFP41002 AC127496.7-201ENST00000625110 1798 ntBASIC22.53■■□□□ 1.2
CCNFP41002 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCNFP41002 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC22.53■■□□□ 1.2
CCNFP41002 BX664725.1-201ENST00000438252 379 ntBASIC22.53■■□□□ 1.2
CCNFP41002 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CCNFP41002 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC22.53■■□□□ 1.2
CCNFP41002 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCNFP41002 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCNFP41002 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC22.53■■□□□ 1.2
CCNFP41002 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC22.53■■□□□ 1.2
CCNFP41002 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 352.8 ms