Protein–RNA interactions for Protein: P38353

SSH1, Sec sixty-one protein homolog, yeastyeast

Known RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSH1P38353 EAR1YMR171C 1653 nt4□□□□□ -1.77
SSH1P38353 SEN1YLR430W 6696 nt4□□□□□ -1.77
SSH1P38353 NUP133YKR082W 3474 nt4□□□□□ -1.77
SSH1P38353 ARP10YDR106W 855 nt4□□□□□ -1.77
SSH1P38353 SNA2YDR525W-A 240 nt4□□□□□ -1.77
SSH1P38353 TYW3YGL050W 822 nt4□□□□□ -1.77
SSH1P38353 MRPL4YLR439W 960 nt4□□□□□ -1.77
SSH1P38353 TAF11YML015C 1041 nt4□□□□□ -1.77
SSH1P38353 POP3YNL282W 588 nt4□□□□□ -1.77
SSH1P38353 MEF2YJL102W 2460 nt4□□□□□ -1.77
SSH1P38353 SWI3YJL176C 2478 nt4□□□□□ -1.77
SSH1P38353 CLB4YLR210W 1383 nt4□□□□□ -1.77
SSH1P38353 BCK2YER167W 2556 nt3.99□□□□□ -1.77
SSH1P38353 ARG82YDR173C 1068 nt3.99□□□□□ -1.77
SSH1P38353 YGR066CYGR066C 879 nt3.99□□□□□ -1.77
SSH1P38353 YRA2YKL214C 612 nt3.99□□□□□ -1.77
SSH1P38353 MRPL39YML009C 213 nt3.99□□□□□ -1.77
SSH1P38353 SAP30YMR263W 606 nt3.99□□□□□ -1.77
SSH1P38353 YPL077CYPL077C 723 nt3.99□□□□□ -1.77
SSH1P38353 SAP4YGL229C 2457 nt3.99□□□□□ -1.77
SSH1P38353 NUP2YLR335W 2163 nt3.99□□□□□ -1.77
SSH1P38353 YJL215CYJL215C 360 nt3.98□□□□□ -1.77
SSH1P38353 RAD27YKL113C 1149 nt3.98□□□□□ -1.77
SSH1P38353 OSW5YMR148W 447 nt3.98□□□□□ -1.77
SSH1P38353 YNL067W-AYNL067W-A 147 nt3.98□□□□□ -1.77
SSH1P38353 YNL134CYNL134C 1131 nt3.98□□□□□ -1.77
SSH1P38353 MFM1YPL060W 1242 nt3.98□□□□□ -1.77
SSH1P38353 HSP26YBR072W 645 nt3.98□□□□□ -1.77
SSH1P38353 SMP1YBR182C 1359 nt3.98□□□□□ -1.77
SSH1P38353 SMF1YOL122C 1728 nt3.98□□□□□ -1.77
SSH1P38353 ZPR1YGR211W 1461 nt3.98□□□□□ -1.77
SSH1P38353 CBF5YLR175W 1452 nt3.98□□□□□ -1.77
SSH1P38353 SAT4YCR008W 1812 nt3.98□□□□□ -1.77
SSH1P38353 PAH1YMR165C 2589 nt3.97□□□□□ -1.77
SSH1P38353 YCR006CYCR006C 474 nt3.97□□□□□ -1.77
SSH1P38353 CPR4YCR069W 957 nt3.97□□□□□ -1.77
SSH1P38353 NAT2YGR147C 867 nt3.97□□□□□ -1.77
SSH1P38353 YGR291CYGR291C 222 nt3.97□□□□□ -1.77
SSH1P38353 MAD2YJL030W 591 nt3.97□□□□□ -1.77
SSH1P38353 LSO1YJR005C-A 282 nt3.97□□□□□ -1.77
SSH1P38353 YJR012CYJR012C 624 nt3.97□□□□□ -1.77
SSH1P38353 LDB18YLL049W 540 nt3.97□□□□□ -1.77
SSH1P38353 NMD4YLR363C 657 nt3.97□□□□□ -1.77
SSH1P38353 NOP13YNL175C 1212 nt3.97□□□□□ -1.77
SSH1P38353 RCL1YOL010W 1104 nt3.97□□□□□ -1.77
SSH1P38353 YOL035CYOL035C 303 nt3.97□□□□□ -1.77
SSH1P38353 FEX1YOR390W 1128 nt3.97□□□□□ -1.77
SSH1P38353 FEX2YPL279C 1128 nt3.97□□□□□ -1.77
SSH1P38353 snR3snR3 194 nt3.97□□□□□ -1.77
SSH1P38353 YBR298C-AYBR298C-A 222 nt3.97□□□□□ -1.77
SSH1P38353 RSC3YDR303C 2658 nt3.97□□□□□ -1.77
SSH1P38353 TAF7YMR227C 1773 nt3.97□□□□□ -1.77
SSH1P38353 MSC2YDR205W 2175 nt3.96□□□□□ -1.78
SSH1P38353 SSH4YKL124W 1740 nt3.96□□□□□ -1.78
SSH1P38353 RAD1YPL022W 3303 nt3.96□□□□□ -1.78
SSH1P38353 RDH54YBR073W 2877 nt3.96□□□□□ -1.78
SSH1P38353 YDL027CYDL027C 1263 nt3.96□□□□□ -1.78
SSH1P38353 ARF2YDL137W 546 nt3.96□□□□□ -1.78
SSH1P38353 YDR274CYDR274C 372 nt3.96□□□□□ -1.78
SSH1P38353 YIF1YNL263C 945 nt3.96□□□□□ -1.78
SSH1P38353 ARG8YOL140W 1272 nt3.96□□□□□ -1.78
SSH1P38353 ATG14YBR128C 1035 nt3.96□□□□□ -1.78
SSH1P38353 SPT23YKL020C 3249 nt3.96□□□□□ -1.78
SSH1P38353 ISR1YPR106W 1332 nt3.95□□□□□ -1.78
SSH1P38353 GAS4YOL132W 1416 nt3.95□□□□□ -1.78
SSH1P38353 PRD1YCL057W 2139 nt3.95□□□□□ -1.78
SSH1P38353 MMR1YLR190W 1476 nt3.95□□□□□ -1.78
SSH1P38353 RPS11AYDR025W 471 nt3.95□□□□□ -1.78
SSH1P38353 SAE3YHR079C-A 276 nt3.95□□□□□ -1.78
SSH1P38353 GVP36YIL041W 981 nt3.95□□□□□ -1.78
SSH1P38353 CSM2YIL132C 642 nt3.95□□□□□ -1.78
SSH1P38353 COA3YJL062W-A 258 nt3.95□□□□□ -1.78
SSH1P38353 TVP38YKR088C 1014 nt3.95□□□□□ -1.78
SSH1P38353 YMR086C-AYMR086C-A 339 nt3.95□□□□□ -1.78
SSH1P38353 YPT53YNL093W 663 nt3.95□□□□□ -1.78
SSH1P38353 YBR141W-AYBR141W-A 96 nt3.95□□□□□ -1.78
SSH1P38353 UMP1YBR173C 447 nt3.95□□□□□ -1.78
SSH1P38353 FAA1YOR317W 2103 nt3.95□□□□□ -1.78
SSH1P38353 MET12YPL023C 1974 nt3.94□□□□□ -1.78
SSH1P38353 snR7-SsnR7-S 179 nt3.94□□□□□ -1.78
SSH1P38353 RNA15YGL044C 891 nt3.94□□□□□ -1.78
SSH1P38353 YMR082CYMR082C 357 nt3.94□□□□□ -1.78
SSH1P38353 YMR130WYMR130W 909 nt3.94□□□□□ -1.78
SSH1P38353 IML2YJL082W 2196 nt3.94□□□□□ -1.78
SSH1P38353 CBP1YJL209W 1965 nt3.94□□□□□ -1.78
SSH1P38353 TEL1YBL088C 8364 nt3.93□□□□□ -1.78
SSH1P38353 LPL1YOR059C 1353 nt3.93□□□□□ -1.78
SSH1P38353 ALG6YOR002W 1635 nt3.93□□□□□ -1.78
SSH1P38353 RPP1AYDL081C 321 nt3.93□□□□□ -1.78
SSH1P38353 RAM1YDL090C 1296 nt3.93□□□□□ -1.78
SSH1P38353 UBC6YER100W 753 nt3.93□□□□□ -1.78
SSH1P38353 YGL088WYGL088W 366 nt3.93□□□□□ -1.78
SSH1P38353 YKL169CYKL169C 384 nt3.93□□□□□ -1.78
SSH1P38353 FBP1YLR377C 1047 nt3.93□□□□□ -1.78
SSH1P38353 MET4YNL103W 2019 nt3.93□□□□□ -1.78
SSH1P38353 APC1YNL172W 5247 nt3.93□□□□□ -1.78
SSH1P38353 NMD3YHR170W 1557 nt3.93□□□□□ -1.78
SSH1P38353 IMD2YHR216W 1572 nt3.93□□□□□ -1.78
SSH1P38353 LAP2YNL045W 2016 nt3.92□□□□□ -1.78
SSH1P38353 GAD1YMR250W 1758 nt3.92□□□□□ -1.78
Retrieved 100 of 7,029 protein–RNA pairs in 23 ms