Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UPK1BO75841 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UPK1BO75841 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
UPK1BO75841 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UPK1BO75841 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UPK1BO75841 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
UPK1BO75841 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.7■□□□□ 0.74
UPK1BO75841 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
UPK1BO75841 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
UPK1BO75841 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UPK1BO75841 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.69■□□□□ 0.74
UPK1BO75841 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UPK1BO75841 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UPK1BO75841 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UPK1BO75841 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
UPK1BO75841 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UPK1BO75841 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
UPK1BO75841 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UPK1BO75841 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UPK1BO75841 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UPK1BO75841 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
UPK1BO75841 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UPK1BO75841 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UPK1BO75841 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.68■□□□□ 0.74
UPK1BO75841 AC005229.4-201ENST00000610085 2198 ntBASIC19.68■□□□□ 0.74
UPK1BO75841 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UPK1BO75841 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
UPK1BO75841 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
UPK1BO75841 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
UPK1BO75841 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UPK1BO75841 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
UPK1BO75841 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
UPK1BO75841 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.67■□□□□ 0.74
UPK1BO75841 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UPK1BO75841 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UPK1BO75841 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.67■□□□□ 0.74
UPK1BO75841 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
UPK1BO75841 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.67■□□□□ 0.74
UPK1BO75841 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UPK1BO75841 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.66■□□□□ 0.74
UPK1BO75841 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
UPK1BO75841 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
UPK1BO75841 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UPK1BO75841 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UPK1BO75841 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UPK1BO75841 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UPK1BO75841 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
UPK1BO75841 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
UPK1BO75841 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
UPK1BO75841 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
UPK1BO75841 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UPK1BO75841 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
UPK1BO75841 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
UPK1BO75841 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
UPK1BO75841 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
UPK1BO75841 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC19.65■□□□□ 0.74
UPK1BO75841 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.65■□□□□ 0.74
UPK1BO75841 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
UPK1BO75841 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
UPK1BO75841 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
UPK1BO75841 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.64■□□□□ 0.74
UPK1BO75841 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
UPK1BO75841 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
UPK1BO75841 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
UPK1BO75841 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
UPK1BO75841 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UPK1BO75841 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.64■□□□□ 0.73
UPK1BO75841 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.64■□□□□ 0.73
UPK1BO75841 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UPK1BO75841 AL359258.2-201ENST00000564063 1566 ntBASIC19.64■□□□□ 0.73
UPK1BO75841 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UPK1BO75841 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
UPK1BO75841 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.64■□□□□ 0.73
UPK1BO75841 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
UPK1BO75841 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.63■□□□□ 0.73
UPK1BO75841 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UPK1BO75841 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.63■□□□□ 0.73
UPK1BO75841 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
UPK1BO75841 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UPK1BO75841 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UPK1BO75841 AC005559.1-201ENST00000589661 871 ntBASIC19.63■□□□□ 0.73
UPK1BO75841 AC007952.6-201ENST00000573168 2673 ntBASIC19.63■□□□□ 0.73
UPK1BO75841 AC003957.1-201ENST00000625108 2673 ntBASIC19.63■□□□□ 0.73
UPK1BO75841 FAM99A-202ENST00000538190 1989 ntBASIC19.63■□□□□ 0.73
UPK1BO75841 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
UPK1BO75841 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
UPK1BO75841 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
UPK1BO75841 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
UPK1BO75841 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UPK1BO75841 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
UPK1BO75841 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UPK1BO75841 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
UPK1BO75841 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
UPK1BO75841 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.62■□□□□ 0.73
UPK1BO75841 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
UPK1BO75841 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
UPK1BO75841 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
UPK1BO75841 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UPK1BO75841 AC080038.3-201ENST00000623346 1952 ntBASIC19.61■□□□□ 0.73
UPK1BO75841 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms