Protein–RNA interactions for Protein: O15260

SURF4, Surfeit locus protein 4, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4O15260 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SURF4O15260 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SURF4O15260 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SURF4O15260 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SURF4O15260 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
SURF4O15260 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
SURF4O15260 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SURF4O15260 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
SURF4O15260 AC127496.7-201ENST00000625110 1798 ntBASIC20.31■□□□□ 0.84
SURF4O15260 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SURF4O15260 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.3■□□□□ 0.84
SURF4O15260 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SURF4O15260 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SURF4O15260 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SURF4O15260 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SURF4O15260 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SURF4O15260 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.3■□□□□ 0.84
SURF4O15260 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.3■□□□□ 0.84
SURF4O15260 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.3■□□□□ 0.84
SURF4O15260 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SURF4O15260 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SURF4O15260 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SURF4O15260 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SURF4O15260 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.29■□□□□ 0.84
SURF4O15260 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.29■□□□□ 0.84
SURF4O15260 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SURF4O15260 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SURF4O15260 AC022616.5-201ENST00000518796 181 ntBASIC20.29■□□□□ 0.84
SURF4O15260 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SURF4O15260 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.29■□□□□ 0.84
SURF4O15260 AC019171.1-201ENST00000601251 1056 ntBASIC20.29■□□□□ 0.84
SURF4O15260 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SURF4O15260 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SURF4O15260 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SURF4O15260 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SURF4O15260 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.28■□□□□ 0.84
SURF4O15260 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SURF4O15260 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SURF4O15260 AC079630.1-202ENST00000618127 1840 ntBASIC20.28■□□□□ 0.84
SURF4O15260 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SURF4O15260 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SURF4O15260 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SURF4O15260 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SURF4O15260 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SURF4O15260 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
SURF4O15260 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SURF4O15260 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SURF4O15260 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SURF4O15260 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SURF4O15260 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SURF4O15260 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.27■□□□□ 0.84
SURF4O15260 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.27■□□□□ 0.84
SURF4O15260 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.27■□□□□ 0.84
SURF4O15260 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SURF4O15260 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
SURF4O15260 ESRRAP2-201ENST00000418437 1549 ntBASIC20.27■□□□□ 0.83
SURF4O15260 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SURF4O15260 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
SURF4O15260 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.26■□□□□ 0.83
SURF4O15260 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SURF4O15260 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SURF4O15260 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SURF4O15260 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SURF4O15260 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.26■□□□□ 0.83
SURF4O15260 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SURF4O15260 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SURF4O15260 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SURF4O15260 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SURF4O15260 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SURF4O15260 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SURF4O15260 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SURF4O15260 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SURF4O15260 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.26■□□□□ 0.83
SURF4O15260 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.25■□□□□ 0.83
SURF4O15260 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.25■□□□□ 0.83
SURF4O15260 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.25■□□□□ 0.83
SURF4O15260 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SURF4O15260 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SURF4O15260 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SURF4O15260 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SURF4O15260 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
SURF4O15260 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.25■□□□□ 0.83
SURF4O15260 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.25■□□□□ 0.83
SURF4O15260 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.25■□□□□ 0.83
SURF4O15260 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.25■□□□□ 0.83
SURF4O15260 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SURF4O15260 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SURF4O15260 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SURF4O15260 AC242852.2-201ENST00000615738 1807 ntBASIC20.25■□□□□ 0.83
SURF4O15260 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SURF4O15260 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SURF4O15260 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SURF4O15260 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.24■□□□□ 0.83
SURF4O15260 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
SURF4O15260 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SURF4O15260 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SURF4O15260 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
SURF4O15260 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.24■□□□□ 0.83
SURF4O15260 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SURF4O15260 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms