Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC15.61■□□□□ 0.09
TRAV13-1A0A0B4J241 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
TRAV13-1A0A0B4J241 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
TRAV13-1A0A0B4J241 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV13-1A0A0B4J241 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV13-1A0A0B4J241 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC15.6■□□□□ 0.09
TRAV13-1A0A0B4J241 DUSP8P3-201ENST00000399571 1760 ntBASIC15.6■□□□□ 0.09
TRAV13-1A0A0B4J241 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV13-1A0A0B4J241 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV13-1A0A0B4J241 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV13-1A0A0B4J241 SSSCA1-AS1-201ENST00000567594 614 ntBASIC15.6■□□□□ 0.09
TRAV13-1A0A0B4J241 CD37-213ENST00000598095 1598 ntTSL 2 BASIC15.6■□□□□ 0.09
TRAV13-1A0A0B4J241 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TRAV13-1A0A0B4J241 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV13-1A0A0B4J241 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV13-1A0A0B4J241 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV13-1A0A0B4J241 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV13-1A0A0B4J241 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV13-1A0A0B4J241 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV13-1A0A0B4J241 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV13-1A0A0B4J241 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TRAV13-1A0A0B4J241 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC15.59■□□□□ 0.09
TRAV13-1A0A0B4J241 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
TRAV13-1A0A0B4J241 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV13-1A0A0B4J241 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC15.59■□□□□ 0.09
TRAV13-1A0A0B4J241 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV13-1A0A0B4J241 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TRAV13-1A0A0B4J241 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV13-1A0A0B4J241 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV13-1A0A0B4J241 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV13-1A0A0B4J241 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
TRAV13-1A0A0B4J241 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV13-1A0A0B4J241 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV13-1A0A0B4J241 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV13-1A0A0B4J241 AL022069.1-201ENST00000568025 1636 ntBASIC15.58■□□□□ 0.09
TRAV13-1A0A0B4J241 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV13-1A0A0B4J241 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
TRAV13-1A0A0B4J241 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV13-1A0A0B4J241 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC15.58■□□□□ 0.08
TRAV13-1A0A0B4J241 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC15.58■□□□□ 0.08
TRAV13-1A0A0B4J241 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV13-1A0A0B4J241 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
TRAV13-1A0A0B4J241 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAV13-1A0A0B4J241 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV13-1A0A0B4J241 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV13-1A0A0B4J241 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
TRAV13-1A0A0B4J241 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV13-1A0A0B4J241 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV13-1A0A0B4J241 TERT-206ENST00000508104 2486 ntTSL 5 BASIC15.58■□□□□ 0.08
TRAV13-1A0A0B4J241 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV13-1A0A0B4J241 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV13-1A0A0B4J241 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV13-1A0A0B4J241 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV13-1A0A0B4J241 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV13-1A0A0B4J241 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
TRAV13-1A0A0B4J241 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV13-1A0A0B4J241 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
TRAV13-1A0A0B4J241 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV13-1A0A0B4J241 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV13-1A0A0B4J241 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV13-1A0A0B4J241 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRAV13-1A0A0B4J241 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV13-1A0A0B4J241 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV13-1A0A0B4J241 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV13-1A0A0B4J241 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV13-1A0A0B4J241 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV13-1A0A0B4J241 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRAV13-1A0A0B4J241 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRAV13-1A0A0B4J241 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV13-1A0A0B4J241 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
TRAV13-1A0A0B4J241 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAV13-1A0A0B4J241 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAV13-1A0A0B4J241 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV13-1A0A0B4J241 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV13-1A0A0B4J241 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TRAV13-1A0A0B4J241 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV13-1A0A0B4J241 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV13-1A0A0B4J241 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TRAV13-1A0A0B4J241 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV13-1A0A0B4J241 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV13-1A0A0B4J241 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
TRAV13-1A0A0B4J241 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV13-1A0A0B4J241 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TRAV13-1A0A0B4J241 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAV13-1A0A0B4J241 MIR4449-201ENST00000578365 66 ntBASIC15.56■□□□□ 0.08
TRAV13-1A0A0B4J241 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAV13-1A0A0B4J241 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV13-1A0A0B4J241 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV13-1A0A0B4J241 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV13-1A0A0B4J241 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC15.56■□□□□ 0.08
TRAV13-1A0A0B4J241 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV13-1A0A0B4J241 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV13-1A0A0B4J241 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
TRAV13-1A0A0B4J241 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAV13-1A0A0B4J241 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
TRAV13-1A0A0B4J241 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TRAV13-1A0A0B4J241 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV13-1A0A0B4J241 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC15.55■□□□□ 0.08
TRAV13-1A0A0B4J241 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAV13-1A0A0B4J241 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms