Protein–RNA interactions for Protein: A0A0B4J1U6

TRBV9, T-cell receptor beta variable 9 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV9A0A0B4J1U6 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRBV9A0A0B4J1U6 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRBV9A0A0B4J1U6 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRBV9A0A0B4J1U6 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRBV9A0A0B4J1U6 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRBV9A0A0B4J1U6 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC17.85■□□□□ 0.45
TRBV9A0A0B4J1U6 ALDH1A3-203ENST00000557963 1670 ntBASIC17.85■□□□□ 0.45
TRBV9A0A0B4J1U6 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC17.85■□□□□ 0.45
TRBV9A0A0B4J1U6 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
TRBV9A0A0B4J1U6 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
TRBV9A0A0B4J1U6 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
TRBV9A0A0B4J1U6 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRBV9A0A0B4J1U6 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC17.84■□□□□ 0.45
TRBV9A0A0B4J1U6 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV9A0A0B4J1U6 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV9A0A0B4J1U6 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV9A0A0B4J1U6 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC17.84■□□□□ 0.45
TRBV9A0A0B4J1U6 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV9A0A0B4J1U6 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV9A0A0B4J1U6 AC009299.2-201ENST00000482477 511 ntBASIC17.84■□□□□ 0.45
TRBV9A0A0B4J1U6 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC17.84■□□□□ 0.45
TRBV9A0A0B4J1U6 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV9A0A0B4J1U6 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV9A0A0B4J1U6 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC17.84■□□□□ 0.45
TRBV9A0A0B4J1U6 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV9A0A0B4J1U6 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV9A0A0B4J1U6 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
TRBV9A0A0B4J1U6 EI24-204ENST00000527235 1625 ntTSL 5 BASIC17.83■□□□□ 0.45
TRBV9A0A0B4J1U6 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC17.83■□□□□ 0.45
TRBV9A0A0B4J1U6 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRBV9A0A0B4J1U6 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC17.83■□□□□ 0.44
TRBV9A0A0B4J1U6 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC17.83■□□□□ 0.44
TRBV9A0A0B4J1U6 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC17.83■□□□□ 0.44
TRBV9A0A0B4J1U6 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRBV9A0A0B4J1U6 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRBV9A0A0B4J1U6 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRBV9A0A0B4J1U6 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRBV9A0A0B4J1U6 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRBV9A0A0B4J1U6 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
TRBV9A0A0B4J1U6 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV9A0A0B4J1U6 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC17.82■□□□□ 0.44
TRBV9A0A0B4J1U6 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC17.82■□□□□ 0.44
TRBV9A0A0B4J1U6 KRT125P-201ENST00000546827 989 ntBASIC17.82■□□□□ 0.44
TRBV9A0A0B4J1U6 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV9A0A0B4J1U6 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV9A0A0B4J1U6 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV9A0A0B4J1U6 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV9A0A0B4J1U6 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TRBV9A0A0B4J1U6 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
TRBV9A0A0B4J1U6 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV9A0A0B4J1U6 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV9A0A0B4J1U6 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TRBV9A0A0B4J1U6 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC17.81■□□□□ 0.44
TRBV9A0A0B4J1U6 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC17.81■□□□□ 0.44
TRBV9A0A0B4J1U6 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
TRBV9A0A0B4J1U6 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV9A0A0B4J1U6 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV9A0A0B4J1U6 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV9A0A0B4J1U6 PKD1P6-201ENST00000343738 4769 ntBASIC17.81■□□□□ 0.44
TRBV9A0A0B4J1U6 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV9A0A0B4J1U6 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV9A0A0B4J1U6 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV9A0A0B4J1U6 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
TRBV9A0A0B4J1U6 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV9A0A0B4J1U6 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV9A0A0B4J1U6 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TRBV9A0A0B4J1U6 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC17.8■□□□□ 0.44
TRBV9A0A0B4J1U6 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV9A0A0B4J1U6 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC17.8■□□□□ 0.44
TRBV9A0A0B4J1U6 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV9A0A0B4J1U6 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV9A0A0B4J1U6 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
TRBV9A0A0B4J1U6 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV9A0A0B4J1U6 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV9A0A0B4J1U6 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV9A0A0B4J1U6 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV9A0A0B4J1U6 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC17.8■□□□□ 0.44
TRBV9A0A0B4J1U6 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TRBV9A0A0B4J1U6 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
TRBV9A0A0B4J1U6 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV9A0A0B4J1U6 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV9A0A0B4J1U6 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV9A0A0B4J1U6 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV9A0A0B4J1U6 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV9A0A0B4J1U6 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV9A0A0B4J1U6 AC239859.2-201ENST00000444165 318 ntBASIC17.79■□□□□ 0.44
TRBV9A0A0B4J1U6 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC17.79■□□□□ 0.44
TRBV9A0A0B4J1U6 AC092028.1-203ENST00000608262 953 ntBASIC17.79■□□□□ 0.44
TRBV9A0A0B4J1U6 MIR6722-201ENST00000617286 78 ntBASIC17.79■□□□□ 0.44
TRBV9A0A0B4J1U6 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC17.79■□□□□ 0.44
TRBV9A0A0B4J1U6 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV9A0A0B4J1U6 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC17.79■□□□□ 0.44
TRBV9A0A0B4J1U6 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC17.79■□□□□ 0.44
TRBV9A0A0B4J1U6 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV9A0A0B4J1U6 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC17.79■□□□□ 0.44
TRBV9A0A0B4J1U6 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV9A0A0B4J1U6 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TRBV9A0A0B4J1U6 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV9A0A0B4J1U6 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV9A0A0B4J1U6 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms