Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RHBDD3Q9Y3P4 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RHBDD3Q9Y3P4 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RHBDD3Q9Y3P4 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RHBDD3Q9Y3P4 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.71■□□□□ 0.75
RHBDD3Q9Y3P4 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RHBDD3Q9Y3P4 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.71■□□□□ 0.75
RHBDD3Q9Y3P4 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.71■□□□□ 0.75
RHBDD3Q9Y3P4 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RHBDD3Q9Y3P4 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RHBDD3Q9Y3P4 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RHBDD3Q9Y3P4 AC131274.2-201ENST00000580697 1507 ntBASIC19.71■□□□□ 0.75
RHBDD3Q9Y3P4 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RHBDD3Q9Y3P4 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RHBDD3Q9Y3P4 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.7■□□□□ 0.74
RHBDD3Q9Y3P4 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RHBDD3Q9Y3P4 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.7■□□□□ 0.74
RHBDD3Q9Y3P4 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RHBDD3Q9Y3P4 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.7■□□□□ 0.74
RHBDD3Q9Y3P4 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RHBDD3Q9Y3P4 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RHBDD3Q9Y3P4 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.7■□□□□ 0.74
RHBDD3Q9Y3P4 AF131216.4-201ENST00000638924 1588 ntBASIC19.7■□□□□ 0.74
RHBDD3Q9Y3P4 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
RHBDD3Q9Y3P4 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RHBDD3Q9Y3P4 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RHBDD3Q9Y3P4 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.69■□□□□ 0.74
RHBDD3Q9Y3P4 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.69■□□□□ 0.74
RHBDD3Q9Y3P4 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.69■□□□□ 0.74
RHBDD3Q9Y3P4 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.69■□□□□ 0.74
RHBDD3Q9Y3P4 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RHBDD3Q9Y3P4 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RHBDD3Q9Y3P4 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
RHBDD3Q9Y3P4 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RHBDD3Q9Y3P4 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RHBDD3Q9Y3P4 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RHBDD3Q9Y3P4 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RHBDD3Q9Y3P4 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.68■□□□□ 0.74
RHBDD3Q9Y3P4 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
RHBDD3Q9Y3P4 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.68■□□□□ 0.74
RHBDD3Q9Y3P4 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RHBDD3Q9Y3P4 AC103724.3-201ENST00000564481 992 ntBASIC19.68■□□□□ 0.74
RHBDD3Q9Y3P4 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.68■□□□□ 0.74
RHBDD3Q9Y3P4 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
RHBDD3Q9Y3P4 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
RHBDD3Q9Y3P4 AL117328.2-201ENST00000624617 1940 ntBASIC19.68■□□□□ 0.74
RHBDD3Q9Y3P4 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RHBDD3Q9Y3P4 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RHBDD3Q9Y3P4 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RHBDD3Q9Y3P4 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.67■□□□□ 0.74
RHBDD3Q9Y3P4 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RHBDD3Q9Y3P4 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.67■□□□□ 0.74
RHBDD3Q9Y3P4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.67■□□□□ 0.74
RHBDD3Q9Y3P4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
RHBDD3Q9Y3P4 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RHBDD3Q9Y3P4 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RHBDD3Q9Y3P4 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RHBDD3Q9Y3P4 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RHBDD3Q9Y3P4 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RHBDD3Q9Y3P4 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RHBDD3Q9Y3P4 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RHBDD3Q9Y3P4 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.66■□□□□ 0.74
RHBDD3Q9Y3P4 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RHBDD3Q9Y3P4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.66■□□□□ 0.74
RHBDD3Q9Y3P4 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RHBDD3Q9Y3P4 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RHBDD3Q9Y3P4 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RHBDD3Q9Y3P4 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RHBDD3Q9Y3P4 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RHBDD3Q9Y3P4 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
RHBDD3Q9Y3P4 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RHBDD3Q9Y3P4 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.65■□□□□ 0.74
RHBDD3Q9Y3P4 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
RHBDD3Q9Y3P4 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RHBDD3Q9Y3P4 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RHBDD3Q9Y3P4 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RHBDD3Q9Y3P4 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RHBDD3Q9Y3P4 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RHBDD3Q9Y3P4 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
RHBDD3Q9Y3P4 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.64■□□□□ 0.73
RHBDD3Q9Y3P4 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RHBDD3Q9Y3P4 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RHBDD3Q9Y3P4 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RHBDD3Q9Y3P4 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
RHBDD3Q9Y3P4 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.63■□□□□ 0.73
RHBDD3Q9Y3P4 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.63■□□□□ 0.73
RHBDD3Q9Y3P4 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
RHBDD3Q9Y3P4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.63■□□□□ 0.73
RHBDD3Q9Y3P4 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.63■□□□□ 0.73
RHBDD3Q9Y3P4 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RHBDD3Q9Y3P4 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RHBDD3Q9Y3P4 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.63■□□□□ 0.73
RHBDD3Q9Y3P4 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RHBDD3Q9Y3P4 AC233723.2-201ENST00000623798 2106 ntBASIC19.63■□□□□ 0.73
RHBDD3Q9Y3P4 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RHBDD3Q9Y3P4 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RHBDD3Q9Y3P4 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RHBDD3Q9Y3P4 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.63■□□□□ 0.73
RHBDD3Q9Y3P4 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
RHBDD3Q9Y3P4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms