Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RHBDD3Q9Y3P4 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RHBDD3Q9Y3P4 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RHBDD3Q9Y3P4 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RHBDD3Q9Y3P4 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.71■□□□□ 0.75
RHBDD3Q9Y3P4 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RHBDD3Q9Y3P4 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.71■□□□□ 0.75
RHBDD3Q9Y3P4 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.71■□□□□ 0.75
RHBDD3Q9Y3P4 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RHBDD3Q9Y3P4 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RHBDD3Q9Y3P4 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RHBDD3Q9Y3P4 AC131274.2-201ENST00000580697 1507 ntBASIC19.71■□□□□ 0.75
RHBDD3Q9Y3P4 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RHBDD3Q9Y3P4 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RHBDD3Q9Y3P4 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.7■□□□□ 0.74
RHBDD3Q9Y3P4 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RHBDD3Q9Y3P4 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.7■□□□□ 0.74
RHBDD3Q9Y3P4 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RHBDD3Q9Y3P4 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.7■□□□□ 0.74
RHBDD3Q9Y3P4 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RHBDD3Q9Y3P4 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RHBDD3Q9Y3P4 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.7■□□□□ 0.74
RHBDD3Q9Y3P4 AF131216.4-201ENST00000638924 1588 ntBASIC19.7■□□□□ 0.74
RHBDD3Q9Y3P4 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
RHBDD3Q9Y3P4 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RHBDD3Q9Y3P4 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RHBDD3Q9Y3P4 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.69■□□□□ 0.74
RHBDD3Q9Y3P4 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.69■□□□□ 0.74
RHBDD3Q9Y3P4 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.69■□□□□ 0.74
RHBDD3Q9Y3P4 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.69■□□□□ 0.74
RHBDD3Q9Y3P4 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RHBDD3Q9Y3P4 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RHBDD3Q9Y3P4 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
RHBDD3Q9Y3P4 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RHBDD3Q9Y3P4 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RHBDD3Q9Y3P4 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RHBDD3Q9Y3P4 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RHBDD3Q9Y3P4 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.68■□□□□ 0.74
RHBDD3Q9Y3P4 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
RHBDD3Q9Y3P4 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.68■□□□□ 0.74
RHBDD3Q9Y3P4 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RHBDD3Q9Y3P4 AC103724.3-201ENST00000564481 992 ntBASIC19.68■□□□□ 0.74
RHBDD3Q9Y3P4 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.68■□□□□ 0.74
RHBDD3Q9Y3P4 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
RHBDD3Q9Y3P4 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
RHBDD3Q9Y3P4 AL117328.2-201ENST00000624617 1940 ntBASIC19.68■□□□□ 0.74
RHBDD3Q9Y3P4 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RHBDD3Q9Y3P4 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RHBDD3Q9Y3P4 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RHBDD3Q9Y3P4 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.67■□□□□ 0.74
RHBDD3Q9Y3P4 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RHBDD3Q9Y3P4 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.67■□□□□ 0.74
RHBDD3Q9Y3P4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.67■□□□□ 0.74
RHBDD3Q9Y3P4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
RHBDD3Q9Y3P4 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RHBDD3Q9Y3P4 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RHBDD3Q9Y3P4 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RHBDD3Q9Y3P4 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RHBDD3Q9Y3P4 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RHBDD3Q9Y3P4 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RHBDD3Q9Y3P4 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RHBDD3Q9Y3P4 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.66■□□□□ 0.74
RHBDD3Q9Y3P4 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RHBDD3Q9Y3P4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.66■□□□□ 0.74
RHBDD3Q9Y3P4 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RHBDD3Q9Y3P4 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RHBDD3Q9Y3P4 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RHBDD3Q9Y3P4 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RHBDD3Q9Y3P4 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RHBDD3Q9Y3P4 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
RHBDD3Q9Y3P4 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RHBDD3Q9Y3P4 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.65■□□□□ 0.74
RHBDD3Q9Y3P4 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
RHBDD3Q9Y3P4 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RHBDD3Q9Y3P4 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RHBDD3Q9Y3P4 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RHBDD3Q9Y3P4 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RHBDD3Q9Y3P4 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RHBDD3Q9Y3P4 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
RHBDD3Q9Y3P4 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.64■□□□□ 0.73
RHBDD3Q9Y3P4 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RHBDD3Q9Y3P4 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RHBDD3Q9Y3P4 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RHBDD3Q9Y3P4 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
RHBDD3Q9Y3P4 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.63■□□□□ 0.73
RHBDD3Q9Y3P4 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.63■□□□□ 0.73
RHBDD3Q9Y3P4 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
RHBDD3Q9Y3P4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.63■□□□□ 0.73
RHBDD3Q9Y3P4 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.63■□□□□ 0.73
RHBDD3Q9Y3P4 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RHBDD3Q9Y3P4 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RHBDD3Q9Y3P4 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.63■□□□□ 0.73
RHBDD3Q9Y3P4 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RHBDD3Q9Y3P4 AC233723.2-201ENST00000623798 2106 ntBASIC19.63■□□□□ 0.73
RHBDD3Q9Y3P4 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RHBDD3Q9Y3P4 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RHBDD3Q9Y3P4 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RHBDD3Q9Y3P4 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.63■□□□□ 0.73
RHBDD3Q9Y3P4 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
RHBDD3Q9Y3P4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms