Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
VCX3BQ9H321 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
VCX3BQ9H321 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
VCX3BQ9H321 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.47■■□□□ 1.03
VCX3BQ9H321 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.47■■□□□ 1.03
VCX3BQ9H321 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
VCX3BQ9H321 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
VCX3BQ9H321 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
VCX3BQ9H321 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
VCX3BQ9H321 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
VCX3BQ9H321 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
VCX3BQ9H321 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
VCX3BQ9H321 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
VCX3BQ9H321 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.47■■□□□ 1.03
VCX3BQ9H321 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
VCX3BQ9H321 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.47■■□□□ 1.03
VCX3BQ9H321 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
VCX3BQ9H321 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
VCX3BQ9H321 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.47■■□□□ 1.03
VCX3BQ9H321 AC092667.1-201ENST00000434301 2586 ntBASIC21.46■■□□□ 1.03
VCX3BQ9H321 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
VCX3BQ9H321 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
VCX3BQ9H321 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
VCX3BQ9H321 AC097358.2-201ENST00000607541 1159 ntBASIC21.46■■□□□ 1.03
VCX3BQ9H321 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
VCX3BQ9H321 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.46■■□□□ 1.03
VCX3BQ9H321 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
VCX3BQ9H321 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
VCX3BQ9H321 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
VCX3BQ9H321 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.46■■□□□ 1.03
VCX3BQ9H321 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
VCX3BQ9H321 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
VCX3BQ9H321 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.03
VCX3BQ9H321 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
VCX3BQ9H321 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
VCX3BQ9H321 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC21.45■■□□□ 1.02
VCX3BQ9H321 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.45■■□□□ 1.02
VCX3BQ9H321 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.45■■□□□ 1.02
VCX3BQ9H321 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
VCX3BQ9H321 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
VCX3BQ9H321 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
VCX3BQ9H321 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
VCX3BQ9H321 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.45■■□□□ 1.02
VCX3BQ9H321 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.44■■□□□ 1.02
VCX3BQ9H321 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
VCX3BQ9H321 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.44■■□□□ 1.02
VCX3BQ9H321 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.44■■□□□ 1.02
VCX3BQ9H321 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
VCX3BQ9H321 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
VCX3BQ9H321 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
VCX3BQ9H321 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
VCX3BQ9H321 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
VCX3BQ9H321 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
VCX3BQ9H321 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
VCX3BQ9H321 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
VCX3BQ9H321 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.43■■□□□ 1.02
VCX3BQ9H321 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.43■■□□□ 1.02
VCX3BQ9H321 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
VCX3BQ9H321 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
VCX3BQ9H321 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
VCX3BQ9H321 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
VCX3BQ9H321 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
VCX3BQ9H321 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
VCX3BQ9H321 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.42■■□□□ 1.02
VCX3BQ9H321 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
VCX3BQ9H321 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
VCX3BQ9H321 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.42■■□□□ 1.02
VCX3BQ9H321 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
VCX3BQ9H321 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.42■■□□□ 1.02
VCX3BQ9H321 MIR219A2-201ENST00000608502 1504 ntBASIC21.42■■□□□ 1.02
VCX3BQ9H321 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
VCX3BQ9H321 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
VCX3BQ9H321 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.42■■□□□ 1.02
VCX3BQ9H321 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.41■■□□□ 1.02
VCX3BQ9H321 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
VCX3BQ9H321 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.41■■□□□ 1.02
VCX3BQ9H321 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
VCX3BQ9H321 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
VCX3BQ9H321 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
VCX3BQ9H321 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
VCX3BQ9H321 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
VCX3BQ9H321 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
VCX3BQ9H321 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
VCX3BQ9H321 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
VCX3BQ9H321 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
VCX3BQ9H321 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
VCX3BQ9H321 C11orf96-202ENST00000528572 1834 ntBASIC21.41■■□□□ 1.02
VCX3BQ9H321 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.41■■□□□ 1.02
VCX3BQ9H321 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
VCX3BQ9H321 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
VCX3BQ9H321 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.4■■□□□ 1.02
VCX3BQ9H321 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
VCX3BQ9H321 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
VCX3BQ9H321 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.4■■□□□ 1.02
VCX3BQ9H321 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
VCX3BQ9H321 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
VCX3BQ9H321 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
VCX3BQ9H321 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
VCX3BQ9H321 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
VCX3BQ9H321 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms