Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC71LQ8N9Z2 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.77■□□□□ 0.59
CCDC71LQ8N9Z2 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC71LQ8N9Z2 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC71LQ8N9Z2 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC71LQ8N9Z2 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC71LQ8N9Z2 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC71LQ8N9Z2 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CCDC71LQ8N9Z2 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC71LQ8N9Z2 AL022069.1-201ENST00000568025 1636 ntBASIC18.76■□□□□ 0.59
CCDC71LQ8N9Z2 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC71LQ8N9Z2 HES4-202ENST00000428771 1040 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC71LQ8N9Z2 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC18.76■□□□□ 0.59
CCDC71LQ8N9Z2 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC71LQ8N9Z2 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC18.76■□□□□ 0.59
CCDC71LQ8N9Z2 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC71LQ8N9Z2 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC71LQ8N9Z2 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC71LQ8N9Z2 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC71LQ8N9Z2 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CCDC71LQ8N9Z2 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC71LQ8N9Z2 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC71LQ8N9Z2 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CCDC71LQ8N9Z2 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC71LQ8N9Z2 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC71LQ8N9Z2 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC71LQ8N9Z2 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC71LQ8N9Z2 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC71LQ8N9Z2 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC71LQ8N9Z2 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC71LQ8N9Z2 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CCDC71LQ8N9Z2 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC71LQ8N9Z2 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC71LQ8N9Z2 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC71LQ8N9Z2 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC71LQ8N9Z2 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC71LQ8N9Z2 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC71LQ8N9Z2 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC71LQ8N9Z2 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CCDC71LQ8N9Z2 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CCDC71LQ8N9Z2 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC71LQ8N9Z2 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CCDC71LQ8N9Z2 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC71LQ8N9Z2 AL592295.1-201ENST00000400984 884 ntBASIC18.74■□□□□ 0.59
CCDC71LQ8N9Z2 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CCDC71LQ8N9Z2 AC137767.1-201ENST00000602918 1920 ntBASIC18.74■□□□□ 0.59
CCDC71LQ8N9Z2 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC71LQ8N9Z2 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC71LQ8N9Z2 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC71LQ8N9Z2 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC71LQ8N9Z2 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC71LQ8N9Z2 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC71LQ8N9Z2 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC71LQ8N9Z2 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CCDC71LQ8N9Z2 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC71LQ8N9Z2 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.73■□□□□ 0.59
CCDC71LQ8N9Z2 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC71LQ8N9Z2 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC71LQ8N9Z2 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC71LQ8N9Z2 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CCDC71LQ8N9Z2 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC71LQ8N9Z2 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.72■□□□□ 0.59
CCDC71LQ8N9Z2 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
CCDC71LQ8N9Z2 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC71LQ8N9Z2 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.72■□□□□ 0.59
CCDC71LQ8N9Z2 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC71LQ8N9Z2 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC71LQ8N9Z2 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC18.72■□□□□ 0.59
CCDC71LQ8N9Z2 SRP68-213ENST00000629930 165 ntTSL 5 BASIC18.72■□□□□ 0.59
CCDC71LQ8N9Z2 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC71LQ8N9Z2 ESRRAP2-201ENST00000418437 1549 ntBASIC18.72■□□□□ 0.59
CCDC71LQ8N9Z2 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC71LQ8N9Z2 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CCDC71LQ8N9Z2 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CCDC71LQ8N9Z2 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
CCDC71LQ8N9Z2 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC71LQ8N9Z2 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC71LQ8N9Z2 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC71LQ8N9Z2 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
CCDC71LQ8N9Z2 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC71LQ8N9Z2 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CCDC71LQ8N9Z2 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
CCDC71LQ8N9Z2 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.71■□□□□ 0.59
CCDC71LQ8N9Z2 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CCDC71LQ8N9Z2 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC71LQ8N9Z2 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC71LQ8N9Z2 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC71LQ8N9Z2 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC71LQ8N9Z2 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.7■□□□□ 0.58
CCDC71LQ8N9Z2 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC71LQ8N9Z2 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC71LQ8N9Z2 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC71LQ8N9Z2 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC71LQ8N9Z2 RPS2P7-201ENST00000447334 885 ntBASIC18.7■□□□□ 0.58
CCDC71LQ8N9Z2 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CCDC71LQ8N9Z2 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CCDC71LQ8N9Z2 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CCDC71LQ8N9Z2 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC71LQ8N9Z2 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC71LQ8N9Z2 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms