Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KRT78Q8N1N4 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KRT78Q8N1N4 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.75■■□□□ 1.07
KRT78Q8N1N4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.75■■□□□ 1.07
KRT78Q8N1N4 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
KRT78Q8N1N4 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.75■■□□□ 1.07
KRT78Q8N1N4 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KRT78Q8N1N4 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
KRT78Q8N1N4 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
KRT78Q8N1N4 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.74■■□□□ 1.07
KRT78Q8N1N4 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KRT78Q8N1N4 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
KRT78Q8N1N4 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KRT78Q8N1N4 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KRT78Q8N1N4 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KRT78Q8N1N4 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KRT78Q8N1N4 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
KRT78Q8N1N4 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
KRT78Q8N1N4 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KRT78Q8N1N4 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KRT78Q8N1N4 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
KRT78Q8N1N4 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.73■■□□□ 1.07
KRT78Q8N1N4 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
KRT78Q8N1N4 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KRT78Q8N1N4 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
KRT78Q8N1N4 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.73■■□□□ 1.07
KRT78Q8N1N4 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.73■■□□□ 1.07
KRT78Q8N1N4 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KRT78Q8N1N4 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KRT78Q8N1N4 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KRT78Q8N1N4 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
KRT78Q8N1N4 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
KRT78Q8N1N4 ANOS2P-203ENST00000472227 1816 ntBASIC21.72■■□□□ 1.07
KRT78Q8N1N4 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
KRT78Q8N1N4 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
KRT78Q8N1N4 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.72■■□□□ 1.07
KRT78Q8N1N4 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.72■■□□□ 1.07
KRT78Q8N1N4 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KRT78Q8N1N4 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
KRT78Q8N1N4 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
KRT78Q8N1N4 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
KRT78Q8N1N4 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
KRT78Q8N1N4 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.71■■□□□ 1.07
KRT78Q8N1N4 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
KRT78Q8N1N4 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KRT78Q8N1N4 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.71■■□□□ 1.07
KRT78Q8N1N4 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.71■■□□□ 1.07
KRT78Q8N1N4 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.71■■□□□ 1.07
KRT78Q8N1N4 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KRT78Q8N1N4 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
KRT78Q8N1N4 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.71■■□□□ 1.07
KRT78Q8N1N4 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.71■■□□□ 1.07
KRT78Q8N1N4 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.07
KRT78Q8N1N4 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
KRT78Q8N1N4 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.7■■□□□ 1.06
KRT78Q8N1N4 DUSP8P5-201ENST00000422884 1815 ntBASIC21.7■■□□□ 1.06
KRT78Q8N1N4 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
KRT78Q8N1N4 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
KRT78Q8N1N4 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.7■■□□□ 1.06
KRT78Q8N1N4 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.69■■□□□ 1.06
KRT78Q8N1N4 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
KRT78Q8N1N4 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
KRT78Q8N1N4 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
KRT78Q8N1N4 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
KRT78Q8N1N4 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KRT78Q8N1N4 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KRT78Q8N1N4 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
KRT78Q8N1N4 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.69■■□□□ 1.06
KRT78Q8N1N4 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
KRT78Q8N1N4 UNC93B8-201ENST00000511903 705 ntBASIC21.69■■□□□ 1.06
KRT78Q8N1N4 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.69■■□□□ 1.06
KRT78Q8N1N4 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
KRT78Q8N1N4 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.69■■□□□ 1.06
KRT78Q8N1N4 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.69■■□□□ 1.06
KRT78Q8N1N4 AC092068.2-201ENST00000590491 1708 ntBASIC21.69■■□□□ 1.06
KRT78Q8N1N4 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.69■■□□□ 1.06
KRT78Q8N1N4 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.69■■□□□ 1.06
KRT78Q8N1N4 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
KRT78Q8N1N4 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
KRT78Q8N1N4 GUSBP5-201ENST00000418136 578 ntBASIC21.68■■□□□ 1.06
KRT78Q8N1N4 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.68■■□□□ 1.06
KRT78Q8N1N4 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
KRT78Q8N1N4 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KRT78Q8N1N4 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.67■■□□□ 1.06
KRT78Q8N1N4 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
KRT78Q8N1N4 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KRT78Q8N1N4 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KRT78Q8N1N4 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
KRT78Q8N1N4 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
KRT78Q8N1N4 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
KRT78Q8N1N4 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
KRT78Q8N1N4 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.67■■□□□ 1.06
KRT78Q8N1N4 KRT16P3-201ENST00000439127 1283 ntBASIC21.67■■□□□ 1.06
KRT78Q8N1N4 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
KRT78Q8N1N4 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
KRT78Q8N1N4 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
KRT78Q8N1N4 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KRT78Q8N1N4 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
KRT78Q8N1N4 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.66■■□□□ 1.06
KRT78Q8N1N4 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms