Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC12.7□□□□□ -0.38
UBR4Q5T4S7 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC12.7□□□□□ -0.38
UBR4Q5T4S7 OAS3-207ENST00000551007 998 ntTSL 2 BASIC12.7□□□□□ -0.38
UBR4Q5T4S7 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC12.7□□□□□ -0.38
UBR4Q5T4S7 BRWD1-AS2-201ENST00000603064 1028 ntBASIC12.7□□□□□ -0.38
UBR4Q5T4S7 MAZ-216ENST00000616501 991 ntTSL 5 BASIC12.7□□□□□ -0.38
UBR4Q5T4S7 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC12.7□□□□□ -0.38
UBR4Q5T4S7 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBR4Q5T4S7 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBR4Q5T4S7 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC12.7□□□□□ -0.38
UBR4Q5T4S7 UNC93B5-201ENST00000530315 699 ntBASIC12.7□□□□□ -0.38
UBR4Q5T4S7 BX255925.1-201ENST00000566954 1854 ntBASIC12.69□□□□□ -0.38
UBR4Q5T4S7 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC12.69□□□□□ -0.38
UBR4Q5T4S7 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC12.69□□□□□ -0.38
UBR4Q5T4S7 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
UBR4Q5T4S7 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBR4Q5T4S7 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC12.69□□□□□ -0.38
UBR4Q5T4S7 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBR4Q5T4S7 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBR4Q5T4S7 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UBR4Q5T4S7 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBR4Q5T4S7 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
UBR4Q5T4S7 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UBR4Q5T4S7 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UBR4Q5T4S7 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UBR4Q5T4S7 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC12.69□□□□□ -0.38
UBR4Q5T4S7 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
UBR4Q5T4S7 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBR4Q5T4S7 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBR4Q5T4S7 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UBR4Q5T4S7 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC12.68□□□□□ -0.38
UBR4Q5T4S7 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
UBR4Q5T4S7 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBR4Q5T4S7 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBR4Q5T4S7 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC12.68□□□□□ -0.38
UBR4Q5T4S7 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC12.68□□□□□ -0.38
UBR4Q5T4S7 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC12.68□□□□□ -0.38
UBR4Q5T4S7 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC12.68□□□□□ -0.38
UBR4Q5T4S7 METTL15-202ENST00000403099 795 ntTSL 5 BASIC12.68□□□□□ -0.38
UBR4Q5T4S7 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UBR4Q5T4S7 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
UBR4Q5T4S7 AL139393.2-201ENST00000608721 2025 ntBASIC12.67□□□□□ -0.38
UBR4Q5T4S7 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBR4Q5T4S7 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
UBR4Q5T4S7 AL121832.2-201ENST00000610979 668 ntBASIC12.67□□□□□ -0.38
UBR4Q5T4S7 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
UBR4Q5T4S7 MIR572-201ENST00000384983 95 ntBASIC12.67□□□□□ -0.38
UBR4Q5T4S7 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
UBR4Q5T4S7 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
UBR4Q5T4S7 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC12.67□□□□□ -0.38
UBR4Q5T4S7 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC12.67□□□□□ -0.38
UBR4Q5T4S7 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
UBR4Q5T4S7 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC12.67□□□□□ -0.38
UBR4Q5T4S7 AC004854.2-201ENST00000608450 1441 ntBASIC12.67□□□□□ -0.38
UBR4Q5T4S7 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
UBR4Q5T4S7 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBR4Q5T4S7 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
UBR4Q5T4S7 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBR4Q5T4S7 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC12.66□□□□□ -0.38
UBR4Q5T4S7 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC12.66□□□□□ -0.38
UBR4Q5T4S7 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC12.66□□□□□ -0.38
UBR4Q5T4S7 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC12.66□□□□□ -0.38
UBR4Q5T4S7 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBR4Q5T4S7 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBR4Q5T4S7 ARMC10P1-201ENST00000313754 855 ntBASIC12.66□□□□□ -0.38
UBR4Q5T4S7 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC12.66□□□□□ -0.38
UBR4Q5T4S7 AC005181.1-201ENST00000604782 1256 ntBASIC12.66□□□□□ -0.38
UBR4Q5T4S7 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBR4Q5T4S7 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBR4Q5T4S7 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC12.66□□□□□ -0.38
UBR4Q5T4S7 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBR4Q5T4S7 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBR4Q5T4S7 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
UBR4Q5T4S7 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBR4Q5T4S7 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBR4Q5T4S7 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC12.65□□□□□ -0.38
UBR4Q5T4S7 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
UBR4Q5T4S7 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBR4Q5T4S7 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBR4Q5T4S7 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
UBR4Q5T4S7 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC12.65□□□□□ -0.38
UBR4Q5T4S7 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC12.65□□□□□ -0.38
UBR4Q5T4S7 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
UBR4Q5T4S7 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
UBR4Q5T4S7 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
UBR4Q5T4S7 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
UBR4Q5T4S7 AC026396.1-201ENST00000419388 421 ntBASIC12.64□□□□□ -0.39
UBR4Q5T4S7 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC12.64□□□□□ -0.39
UBR4Q5T4S7 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
UBR4Q5T4S7 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC12.64□□□□□ -0.39
UBR4Q5T4S7 MME-217ENST00000616757 1315 ntTSL 5 BASIC12.64□□□□□ -0.39
UBR4Q5T4S7 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
UBR4Q5T4S7 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBR4Q5T4S7 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBR4Q5T4S7 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
UBR4Q5T4S7 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
UBR4Q5T4S7 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
UBR4Q5T4S7 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC12.64□□□□□ -0.39
UBR4Q5T4S7 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
UBR4Q5T4S7 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms