Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.06■□□□□ 0.8
CSNK1A1P48729 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CSNK1A1P48729 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CSNK1A1P48729 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CSNK1A1P48729 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CSNK1A1P48729 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.05■□□□□ 0.8
CSNK1A1P48729 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CSNK1A1P48729 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.05■□□□□ 0.8
CSNK1A1P48729 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CSNK1A1P48729 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CSNK1A1P48729 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.05■□□□□ 0.8
CSNK1A1P48729 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CSNK1A1P48729 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CSNK1A1P48729 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CSNK1A1P48729 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CSNK1A1P48729 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CSNK1A1P48729 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CSNK1A1P48729 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CSNK1A1P48729 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.04■□□□□ 0.8
CSNK1A1P48729 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CSNK1A1P48729 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CSNK1A1P48729 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CSNK1A1P48729 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CSNK1A1P48729 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CSNK1A1P48729 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.04■□□□□ 0.8
CSNK1A1P48729 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CSNK1A1P48729 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.04■□□□□ 0.8
CSNK1A1P48729 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.04■□□□□ 0.8
CSNK1A1P48729 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CSNK1A1P48729 ANOS2P-203ENST00000472227 1816 ntBASIC20.04■□□□□ 0.8
CSNK1A1P48729 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CSNK1A1P48729 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CSNK1A1P48729 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CSNK1A1P48729 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.03■□□□□ 0.8
CSNK1A1P48729 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CSNK1A1P48729 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CSNK1A1P48729 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CSNK1A1P48729 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CSNK1A1P48729 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.03■□□□□ 0.8
CSNK1A1P48729 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.03■□□□□ 0.8
CSNK1A1P48729 UNC93B8-201ENST00000511903 705 ntBASIC20.03■□□□□ 0.8
CSNK1A1P48729 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CSNK1A1P48729 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.03■□□□□ 0.8
CSNK1A1P48729 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CSNK1A1P48729 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.03■□□□□ 0.8
CSNK1A1P48729 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CSNK1A1P48729 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CSNK1A1P48729 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CSNK1A1P48729 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CSNK1A1P48729 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.02■□□□□ 0.8
CSNK1A1P48729 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.02■□□□□ 0.8
CSNK1A1P48729 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CSNK1A1P48729 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CSNK1A1P48729 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CSNK1A1P48729 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.02■□□□□ 0.79
CSNK1A1P48729 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CSNK1A1P48729 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CSNK1A1P48729 GUSBP5-201ENST00000418136 578 ntBASIC20.01■□□□□ 0.79
CSNK1A1P48729 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.01■□□□□ 0.79
CSNK1A1P48729 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.01■□□□□ 0.79
CSNK1A1P48729 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CSNK1A1P48729 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CSNK1A1P48729 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CSNK1A1P48729 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CSNK1A1P48729 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CSNK1A1P48729 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CSNK1A1P48729 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20■□□□□ 0.79
CSNK1A1P48729 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CSNK1A1P48729 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20■□□□□ 0.79
CSNK1A1P48729 DUSP8P5-201ENST00000422884 1815 ntBASIC20■□□□□ 0.79
CSNK1A1P48729 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CSNK1A1P48729 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20■□□□□ 0.79
CSNK1A1P48729 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CSNK1A1P48729 KRT16P3-201ENST00000439127 1283 ntBASIC20■□□□□ 0.79
CSNK1A1P48729 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CSNK1A1P48729 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20■□□□□ 0.79
CSNK1A1P48729 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CSNK1A1P48729 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CSNK1A1P48729 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CSNK1A1P48729 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CSNK1A1P48729 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.99■□□□□ 0.79
CSNK1A1P48729 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.99■□□□□ 0.79
CSNK1A1P48729 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CSNK1A1P48729 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CSNK1A1P48729 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CSNK1A1P48729 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CSNK1A1P48729 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CSNK1A1P48729 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CSNK1A1P48729 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.98■□□□□ 0.79
CSNK1A1P48729 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CSNK1A1P48729 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CSNK1A1P48729 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.98■□□□□ 0.79
CSNK1A1P48729 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CSNK1A1P48729 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.98■□□□□ 0.79
CSNK1A1P48729 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CSNK1A1P48729 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
CSNK1A1P48729 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.98■□□□□ 0.79
CSNK1A1P48729 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.98■□□□□ 0.79
CSNK1A1P48729 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CSNK1A1P48729 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms