Protein–RNA interactions for Protein: P38316

ATG12, Ubiquitin-like protein ATG12, yeast

Predictions only

Length 186 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG12	P38316	RFA2	YNL312W	822 nt		4.49	□□□□□ -1.69
ATG12	P38316	RAD53	YPL153C	2466 nt		4.49	□□□□□ -1.69
ATG12	P38316	ASK10	YGR097W	3441 nt		4.49	□□□□□ -1.69
ATG12	P38316	STE12	YHR084W	2067 nt		4.49	□□□□□ -1.69
ATG12	P38316	NUP2	YLR335W	2163 nt		4.48	□□□□□ -1.69
ATG12	P38316	EAR1	YMR171C	1653 nt		4.48	□□□□□ -1.69
ATG12	P38316	SWC3	YAL011W	1878 nt		4.48	□□□□□ -1.69
ATG12	P38316	MET12	YPL023C	1974 nt		4.48	□□□□□ -1.69
ATG12	P38316	ATR1	YML116W	1629 nt		4.48	□□□□□ -1.69
ATG12	P38316	FRA2	YGL220W	363 nt		4.48	□□□□□ -1.69
ATG12	P38316	TYS1	YGR185C	1185 nt		4.48	□□□□□ -1.69
ATG12	P38316	SKI6	YGR195W	741 nt		4.48	□□□□□ -1.69
ATG12	P38316	CNB1	YKL190W	528 nt		4.48	□□□□□ -1.69
ATG12	P38316	YNL194C	YNL194C	906 nt		4.48	□□□□□ -1.69
ATG12	P38316	MED4	YOR174W	855 nt		4.48	□□□□□ -1.69
ATG12	P38316	YCL021W-A	YCL021W-A	378 nt		4.48	□□□□□ -1.69
ATG12	P38316	CTT1	YGR088W	1689 nt		4.48	□□□□□ -1.69
ATG12	P38316	IMA3	YIL172C	1770 nt		4.48	□□□□□ -1.69
ATG12	P38316	IMA4	YJL221C	1770 nt		4.48	□□□□□ -1.69
ATG12	P38316	MNN11	YJL183W	1269 nt		4.47	□□□□□ -1.69
ATG12	P38316	CPR6	YLR216C	1116 nt		4.47	□□□□□ -1.69
ATG12	P38316	CKA2	YOR061W	1020 nt		4.47	□□□□□ -1.69
ATG12	P38316	FRE7	YOL152W	1863 nt		4.47	□□□□□ -1.69
ATG12	P38316	PRD1	YCL057W	2139 nt		4.46	□□□□□ -1.69
ATG12	P38316	RSM10	YDR041W	612 nt		4.46	□□□□□ -1.7
ATG12	P38316	SPO19	YPL130W	672 nt		4.46	□□□□□ -1.7
ATG12	P38316	MET4	YNL103W	2019 nt		4.46	□□□□□ -1.7
ATG12	P38316	SUL2	YLR092W	2682 nt		4.46	□□□□□ -1.7
ATG12	P38316	NGL2	YMR285C	1548 nt		4.46	□□□□□ -1.7
ATG12	P38316	MNN4	YKL201C	3537 nt		4.46	□□□□□ -1.7
ATG12	P38316	EGT2	YNL327W	3126 nt		4.46	□□□□□ -1.7
ATG12	P38316	LCB2	YDR062W	1686 nt		4.45	□□□□□ -1.7
ATG12	P38316	HMLALPHA1	YCL066W	528 nt		4.45	□□□□□ -1.7
ATG12	P38316	MATALPHA1	YCR040W	528 nt		4.45	□□□□□ -1.7
ATG12	P38316	PER1	YCR044C	1074 nt		4.45	□□□□□ -1.7
ATG12	P38316	YDR133C	YDR133C	336 nt		4.45	□□□□□ -1.7
ATG12	P38316	YIL021C-A	YIL021C-A	270 nt		4.45	□□□□□ -1.7
ATG12	P38316	LSO1	YJR005C-A	282 nt		4.45	□□□□□ -1.7
ATG12	P38316	MEC3	YLR288C	1425 nt		4.45	□□□□□ -1.7
ATG12	P38316	IMD2	YHR216W	1572 nt		4.44	□□□□□ -1.7
ATG12	P38316	KCH1	YJR054W	1494 nt		4.44	□□□□□ -1.7
ATG12	P38316	CLB4	YLR210W	1383 nt		4.44	□□□□□ -1.7
ATG12	P38316	COQ4	YDR204W	1008 nt		4.44	□□□□□ -1.7
ATG12	P38316	RNA15	YGL044C	891 nt		4.44	□□□□□ -1.7
ATG12	P38316	RPS4B	YHR203C	786 nt		4.44	□□□□□ -1.7
ATG12	P38316	YJL215C	YJL215C	360 nt		4.44	□□□□□ -1.7
ATG12	P38316	RPS4A	YJR145C	786 nt		4.44	□□□□□ -1.7
ATG12	P38316	MTF1	YMR228W	1026 nt		4.44	□□□□□ -1.7
ATG12	P38316	SUM1	YDR310C	3189 nt		4.44	□□□□□ -1.7
ATG12	P38316	TFG1	YGR186W	2208 nt		4.44	□□□□□ -1.7
ATG12	P38316	YGR125W	YGR125W	3111 nt		4.43	□□□□□ -1.7
ATG12	P38316	YCR006C	YCR006C	474 nt		4.43	□□□□□ -1.7
ATG12	P38316	RTT103	YDR289C	1230 nt		4.43	□□□□□ -1.7
ATG12	P38316	PIC2	YER053C	903 nt		4.43	□□□□□ -1.7
ATG12	P38316	GRX4	YER174C	735 nt		4.43	□□□□□ -1.7
ATG12	P38316	FMP46	YKR049C	402 nt		4.43	□□□□□ -1.7
ATG12	P38316	RFU1	YLR073C	603 nt		4.43	□□□□□ -1.7
ATG12	P38316	CDC21	YOR074C	915 nt		4.43	□□□□□ -1.7
ATG12	P38316	GCR1	YPL075W	2358 nt		4.42	□□□□□ -1.7
ATG12	P38316	snR7-S	snR7-S	179 nt		4.42	□□□□□ -1.7
ATG12	P38316	YGL185C	YGL185C	1140 nt		4.42	□□□□□ -1.7
ATG12	P38316	ARN2	YHL047C	1863 nt		4.42	□□□□□ -1.7
ATG12	P38316	UBA2	YDR390C	1911 nt		4.42	□□□□□ -1.7
ATG12	P38316	PHM7	YOL084W	2976 nt		4.41	□□□□□ -1.7
ATG12	P38316	NUP42	YDR192C	1293 nt		4.41	□□□□□ -1.7
ATG12	P38316	YJR085C	YJR085C	318 nt		4.41	□□□□□ -1.7
ATG12	P38316	MRPL20	YKR085C	588 nt		4.41	□□□□□ -1.7
ATG12	P38316	NKP2	YLR315W	462 nt		4.41	□□□□□ -1.7
ATG12	P38316	HSP82	YPL240C	2130 nt		4.41	□□□□□ -1.7
ATG12	P38316	ISR1	YPR106W	1332 nt		4.41	□□□□□ -1.7
ATG12	P38316	OLE1	YGL055W	1533 nt		4.41	□□□□□ -1.7
ATG12	P38316	HIS4	YCL030C	2400 nt		4.4	□□□□□ -1.7
ATG12	P38316	HST4	YDR191W	1113 nt		4.4	□□□□□ -1.71
ATG12	P38316	RRP40	YOL142W	723 nt		4.4	□□□□□ -1.71
ATG12	P38316	ADY3	YDL239C	2373 nt		4.4	□□□□□ -1.71
ATG12	P38316	IMA1	YGR287C	1770 nt		4.4	□□□□□ -1.71
ATG12	P38316	AFT1	YGL071W	2073 nt		4.39	□□□□□ -1.71
ATG12	P38316	UBC8	YEL012W	657 nt		4.39	□□□□□ -1.71
ATG12	P38316	TAF11	YML015C	1041 nt		4.39	□□□□□ -1.71
ATG12	P38316	TOM40	YMR203W	1164 nt		4.39	□□□□□ -1.71
ATG12	P38316	DSC2	YOL073C	969 nt		4.39	□□□□□ -1.71
ATG12	P38316	snR19	snR19	568 nt		4.39	□□□□□ -1.71
ATG12	P38316	YMR221C	YMR221C	1515 nt		4.39	□□□□□ -1.71
ATG12	P38316	SLD2	YKL108W	1362 nt		4.39	□□□□□ -1.71
ATG12	P38316	CYM1	YDR430C	2970 nt		4.38	□□□□□ -1.71
ATG12	P38316	PEP5	YMR231W	3090 nt		4.38	□□□□□ -1.71
ATG12	P38316	MDR1	YGR100W	2853 nt		4.38	□□□□□ -1.71
ATG12	P38316	MRE11	YMR224C	2079 nt		4.38	□□□□□ -1.71
ATG12	P38316	YDR056C	YDR056C	618 nt		4.38	□□□□□ -1.71
ATG12	P38316	SPS18	YNL204C	903 nt		4.38	□□□□□ -1.71
ATG12	P38316	PDX3	YBR035C	687 nt		4.38	□□□□□ -1.71
ATG12	P38316	TIP41	YPR040W	1071 nt		4.38	□□□□□ -1.71
ATG12	P38316	THS1	YIL078W	2205 nt		4.38	□□□□□ -1.71
ATG12	P38316	MAL13	YGR288W	1422 nt		4.38	□□□□□ -1.71
ATG12	P38316	LUC7	YDL087C	786 nt		4.37	□□□□□ -1.71
ATG12	P38316	TMA17	YDL110C	453 nt		4.37	□□□□□ -1.71
ATG12	P38316	DPB4	YDR121W	591 nt		4.37	□□□□□ -1.71
ATG12	P38316	COS6	YGR295C	1146 nt		4.37	□□□□□ -1.71
ATG12	P38316	ECM1	YAL059W	639 nt		4.37	□□□□□ -1.71
ATG12	P38316	NTR2	YKR022C	969 nt		4.37	□□□□□ -1.71

Retrieved 100 of 7,029 protein–RNA pairs in 54.7 ms