Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LINGO3P0C6S8 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.71■■□□□ 1.07
LINGO3P0C6S8 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LINGO3P0C6S8 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LINGO3P0C6S8 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LINGO3P0C6S8 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.71■■□□□ 1.07
LINGO3P0C6S8 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
LINGO3P0C6S8 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.71■■□□□ 1.07
LINGO3P0C6S8 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LINGO3P0C6S8 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
LINGO3P0C6S8 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
LINGO3P0C6S8 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.07
LINGO3P0C6S8 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
LINGO3P0C6S8 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LINGO3P0C6S8 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
LINGO3P0C6S8 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.69■■□□□ 1.06
LINGO3P0C6S8 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
LINGO3P0C6S8 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
LINGO3P0C6S8 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LINGO3P0C6S8 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
LINGO3P0C6S8 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.69■■□□□ 1.06
LINGO3P0C6S8 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LINGO3P0C6S8 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LINGO3P0C6S8 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LINGO3P0C6S8 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.69■■□□□ 1.06
LINGO3P0C6S8 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.69■■□□□ 1.06
LINGO3P0C6S8 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
LINGO3P0C6S8 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
LINGO3P0C6S8 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LINGO3P0C6S8 SLC6A10P-202ENST00000431994 2058 ntBASIC21.68■■□□□ 1.06
LINGO3P0C6S8 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LINGO3P0C6S8 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LINGO3P0C6S8 AC004987.1-201ENST00000428627 508 ntBASIC21.68■■□□□ 1.06
LINGO3P0C6S8 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.68■■□□□ 1.06
LINGO3P0C6S8 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
LINGO3P0C6S8 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LINGO3P0C6S8 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LINGO3P0C6S8 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.68■■□□□ 1.06
LINGO3P0C6S8 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
LINGO3P0C6S8 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LINGO3P0C6S8 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.68■■□□□ 1.06
LINGO3P0C6S8 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LINGO3P0C6S8 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LINGO3P0C6S8 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LINGO3P0C6S8 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.67■■□□□ 1.06
LINGO3P0C6S8 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
LINGO3P0C6S8 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LINGO3P0C6S8 ATP5G2P3-201ENST00000429083 425 ntBASIC21.67■■□□□ 1.06
LINGO3P0C6S8 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.67■■□□□ 1.06
LINGO3P0C6S8 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.67■■□□□ 1.06
LINGO3P0C6S8 AC012354.3-201ENST00000623734 483 ntBASIC21.67■■□□□ 1.06
LINGO3P0C6S8 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LINGO3P0C6S8 AL391422.3-201ENST00000603791 2761 ntBASIC21.67■■□□□ 1.06
LINGO3P0C6S8 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LINGO3P0C6S8 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LINGO3P0C6S8 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
LINGO3P0C6S8 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.67■■□□□ 1.06
LINGO3P0C6S8 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
LINGO3P0C6S8 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LINGO3P0C6S8 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LINGO3P0C6S8 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.66■■□□□ 1.06
LINGO3P0C6S8 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
LINGO3P0C6S8 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
LINGO3P0C6S8 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LINGO3P0C6S8 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LINGO3P0C6S8 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
LINGO3P0C6S8 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
LINGO3P0C6S8 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
LINGO3P0C6S8 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
LINGO3P0C6S8 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
LINGO3P0C6S8 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.65■■□□□ 1.06
LINGO3P0C6S8 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.65■■□□□ 1.06
LINGO3P0C6S8 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
LINGO3P0C6S8 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LINGO3P0C6S8 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
LINGO3P0C6S8 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
LINGO3P0C6S8 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
LINGO3P0C6S8 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LINGO3P0C6S8 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
LINGO3P0C6S8 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LINGO3P0C6S8 TSPY13P-201ENST00000338964 914 ntBASIC21.64■■□□□ 1.05
LINGO3P0C6S8 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
LINGO3P0C6S8 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
LINGO3P0C6S8 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.64■■□□□ 1.05
LINGO3P0C6S8 RPS2P7-201ENST00000447334 885 ntBASIC21.64■■□□□ 1.05
LINGO3P0C6S8 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.64■■□□□ 1.05
LINGO3P0C6S8 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.64■■□□□ 1.05
LINGO3P0C6S8 DUX4L18-201ENST00000553347 1267 ntBASIC21.64■■□□□ 1.05
LINGO3P0C6S8 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.64■■□□□ 1.05
LINGO3P0C6S8 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LINGO3P0C6S8 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LINGO3P0C6S8 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LINGO3P0C6S8 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
LINGO3P0C6S8 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.64■■□□□ 1.05
LINGO3P0C6S8 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LINGO3P0C6S8 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LINGO3P0C6S8 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
LINGO3P0C6S8 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
LINGO3P0C6S8 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LINGO3P0C6S8 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms