Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GAPDHP04406 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
GAPDHP04406 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GAPDHP04406 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
GAPDHP04406 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GAPDHP04406 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
GAPDHP04406 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GAPDHP04406 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
GAPDHP04406 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
GAPDHP04406 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
GAPDHP04406 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.81■□□□□ 0.6
GAPDHP04406 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GAPDHP04406 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.81■□□□□ 0.6
GAPDHP04406 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.81■□□□□ 0.6
GAPDHP04406 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GAPDHP04406 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GAPDHP04406 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
GAPDHP04406 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GAPDHP04406 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC18.81■□□□□ 0.6
GAPDHP04406 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GAPDHP04406 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
GAPDHP04406 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.8■□□□□ 0.6
GAPDHP04406 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC18.8■□□□□ 0.6
GAPDHP04406 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.8■□□□□ 0.6
GAPDHP04406 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
GAPDHP04406 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GAPDHP04406 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
GAPDHP04406 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
GAPDHP04406 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GAPDHP04406 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
GAPDHP04406 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GAPDHP04406 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
GAPDHP04406 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.79■□□□□ 0.6
GAPDHP04406 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GAPDHP04406 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GAPDHP04406 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.79■□□□□ 0.6
GAPDHP04406 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GAPDHP04406 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.79■□□□□ 0.6
GAPDHP04406 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
GAPDHP04406 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GAPDHP04406 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.79■□□□□ 0.6
GAPDHP04406 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
GAPDHP04406 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
GAPDHP04406 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC18.79■□□□□ 0.6
GAPDHP04406 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.78■□□□□ 0.6
GAPDHP04406 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
GAPDHP04406 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
GAPDHP04406 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GAPDHP04406 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.78■□□□□ 0.6
GAPDHP04406 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.78■□□□□ 0.6
GAPDHP04406 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.78■□□□□ 0.6
GAPDHP04406 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
GAPDHP04406 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GAPDHP04406 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.78■□□□□ 0.6
GAPDHP04406 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GAPDHP04406 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
GAPDHP04406 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.78■□□□□ 0.6
GAPDHP04406 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GAPDHP04406 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GAPDHP04406 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GAPDHP04406 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GAPDHP04406 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.77■□□□□ 0.6
GAPDHP04406 AC103724.3-201ENST00000564481 992 ntBASIC18.77■□□□□ 0.6
GAPDHP04406 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
GAPDHP04406 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GAPDHP04406 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.77■□□□□ 0.59
GAPDHP04406 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
GAPDHP04406 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GAPDHP04406 C1orf229-201ENST00000623686 2258 ntBASIC18.76■□□□□ 0.59
GAPDHP04406 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GAPDHP04406 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GAPDHP04406 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.76■□□□□ 0.59
GAPDHP04406 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GAPDHP04406 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
GAPDHP04406 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
GAPDHP04406 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GAPDHP04406 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GAPDHP04406 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.76■□□□□ 0.59
GAPDHP04406 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GAPDHP04406 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.76■□□□□ 0.59
GAPDHP04406 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.76■□□□□ 0.59
GAPDHP04406 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.76■□□□□ 0.59
GAPDHP04406 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.75■□□□□ 0.59
GAPDHP04406 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GAPDHP04406 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
GAPDHP04406 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GAPDHP04406 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GAPDHP04406 MIR4281-201ENST00000580852 62 ntBASIC18.75■□□□□ 0.59
GAPDHP04406 AL031848.2-201ENST00000607670 837 ntBASIC18.75■□□□□ 0.59
GAPDHP04406 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GAPDHP04406 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GAPDHP04406 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
GAPDHP04406 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
GAPDHP04406 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
GAPDHP04406 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GAPDHP04406 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
GAPDHP04406 ECEL1P1-201ENST00000373592 1742 ntBASIC18.74■□□□□ 0.59
GAPDHP04406 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
GAPDHP04406 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GAPDHP04406 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms