Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TBC1D3BA6NDS4 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC23.05■■□□□ 1.28
TBC1D3BA6NDS4 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.05■■□□□ 1.28
TBC1D3BA6NDS4 AC233992.3-201ENST00000607491 485 ntBASIC23.05■■□□□ 1.28
TBC1D3BA6NDS4 pRNA.6-201ENST00000610482 90 ntBASIC23.05■■□□□ 1.28
TBC1D3BA6NDS4 pRNA.5-201ENST00000612139 90 ntBASIC23.05■■□□□ 1.28
TBC1D3BA6NDS4 pRNA.11-201ENST00000618423 90 ntBASIC23.05■■□□□ 1.28
TBC1D3BA6NDS4 pRNA.13-201ENST00000619112 90 ntBASIC23.05■■□□□ 1.28
TBC1D3BA6NDS4 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.05■■□□□ 1.28
TBC1D3BA6NDS4 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TBC1D3BA6NDS4 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TBC1D3BA6NDS4 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.04■■□□□ 1.28
TBC1D3BA6NDS4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.04■■□□□ 1.28
TBC1D3BA6NDS4 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC23.04■■□□□ 1.28
TBC1D3BA6NDS4 AC092666.2-201ENST00000613287 246 ntBASIC23.04■■□□□ 1.28
TBC1D3BA6NDS4 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TBC1D3BA6NDS4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TBC1D3BA6NDS4 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
TBC1D3BA6NDS4 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
TBC1D3BA6NDS4 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.03■■□□□ 1.28
TBC1D3BA6NDS4 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TBC1D3BA6NDS4 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TBC1D3BA6NDS4 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TBC1D3BA6NDS4 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TBC1D3BA6NDS4 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TBC1D3BA6NDS4 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TBC1D3BA6NDS4 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TBC1D3BA6NDS4 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TBC1D3BA6NDS4 IRS3P-201ENST00000223076 1006 ntBASIC23.02■■□□□ 1.28
TBC1D3BA6NDS4 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TBC1D3BA6NDS4 BX842568.3-201ENST00000418104 571 ntBASIC23.02■■□□□ 1.28
TBC1D3BA6NDS4 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC23.02■■□□□ 1.28
TBC1D3BA6NDS4 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.02■■□□□ 1.28
TBC1D3BA6NDS4 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.02■■□□□ 1.28
TBC1D3BA6NDS4 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TBC1D3BA6NDS4 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TBC1D3BA6NDS4 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.02■■□□□ 1.27
TBC1D3BA6NDS4 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.01■■□□□ 1.27
TBC1D3BA6NDS4 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TBC1D3BA6NDS4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
TBC1D3BA6NDS4 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TBC1D3BA6NDS4 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TBC1D3BA6NDS4 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
TBC1D3BA6NDS4 AC141586.4-201ENST00000624558 1573 ntBASIC23.01■■□□□ 1.27
TBC1D3BA6NDS4 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TBC1D3BA6NDS4 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
TBC1D3BA6NDS4 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC23■■□□□ 1.27
TBC1D3BA6NDS4 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC23■■□□□ 1.27
TBC1D3BA6NDS4 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TBC1D3BA6NDS4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TBC1D3BA6NDS4 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.99■■□□□ 1.27
TBC1D3BA6NDS4 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TBC1D3BA6NDS4 GRAMD4P2-201ENST00000423297 1097 ntBASIC22.99■■□□□ 1.27
TBC1D3BA6NDS4 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC22.99■■□□□ 1.27
TBC1D3BA6NDS4 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TBC1D3BA6NDS4 MPST-208ENST00000628507 698 ntTSL 5 BASIC22.99■■□□□ 1.27
TBC1D3BA6NDS4 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TBC1D3BA6NDS4 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TBC1D3BA6NDS4 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
TBC1D3BA6NDS4 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
TBC1D3BA6NDS4 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.98■■□□□ 1.27
TBC1D3BA6NDS4 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
TBC1D3BA6NDS4 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
TBC1D3BA6NDS4 RHOF-204ENST00000537265 699 ntTSL 2 BASIC22.98■■□□□ 1.27
TBC1D3BA6NDS4 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC22.98■■□□□ 1.27
TBC1D3BA6NDS4 MIR6821-201ENST00000617625 74 ntBASIC22.98■■□□□ 1.27
TBC1D3BA6NDS4 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC22.98■■□□□ 1.27
TBC1D3BA6NDS4 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.97■■□□□ 1.27
TBC1D3BA6NDS4 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC22.97■■□□□ 1.27
TBC1D3BA6NDS4 AC097381.1-201ENST00000429019 1296 ntBASIC22.97■■□□□ 1.27
TBC1D3BA6NDS4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
TBC1D3BA6NDS4 AC138932.3-201ENST00000567634 1902 ntBASIC22.97■■□□□ 1.27
TBC1D3BA6NDS4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC22.97■■□□□ 1.27
TBC1D3BA6NDS4 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
TBC1D3BA6NDS4 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TBC1D3BA6NDS4 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
TBC1D3BA6NDS4 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
TBC1D3BA6NDS4 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TBC1D3BA6NDS4 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TBC1D3BA6NDS4 AC126544.1-201ENST00000580842 1059 ntBASIC22.96■■□□□ 1.27
TBC1D3BA6NDS4 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC22.96■■□□□ 1.27
TBC1D3BA6NDS4 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TBC1D3BA6NDS4 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
TBC1D3BA6NDS4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC22.96■■□□□ 1.27
TBC1D3BA6NDS4 AC142381.3-201ENST00000568208 1670 ntBASIC22.96■■□□□ 1.27
TBC1D3BA6NDS4 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.96■■□□□ 1.27
TBC1D3BA6NDS4 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
TBC1D3BA6NDS4 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
TBC1D3BA6NDS4 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
TBC1D3BA6NDS4 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TBC1D3BA6NDS4 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
TBC1D3BA6NDS4 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
TBC1D3BA6NDS4 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC22.95■■□□□ 1.26
TBC1D3BA6NDS4 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
TBC1D3BA6NDS4 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC22.95■■□□□ 1.26
TBC1D3BA6NDS4 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
TBC1D3BA6NDS4 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.95■■□□□ 1.26
TBC1D3BA6NDS4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC22.95■■□□□ 1.26
TBC1D3BA6NDS4 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
TBC1D3BA6NDS4 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22.94■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms