Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC27.3■■□□□ 1.96
PCDHAC2Q9Y5I4 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC27.3■■□□□ 1.96
PCDHAC2Q9Y5I4 AC233992.3-201ENST00000607491 485 ntBASIC27.3■■□□□ 1.96
PCDHAC2Q9Y5I4 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
PCDHAC2Q9Y5I4 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
PCDHAC2Q9Y5I4 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC27.3■■□□□ 1.96
PCDHAC2Q9Y5I4 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
PCDHAC2Q9Y5I4 SP2-202ENST00000613139 908 ntTSL 5 BASIC27.29■■□□□ 1.96
PCDHAC2Q9Y5I4 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
PCDHAC2Q9Y5I4 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
PCDHAC2Q9Y5I4 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC27.29■■□□□ 1.96
PCDHAC2Q9Y5I4 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC27.29■■□□□ 1.96
PCDHAC2Q9Y5I4 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
PCDHAC2Q9Y5I4 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
PCDHAC2Q9Y5I4 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
PCDHAC2Q9Y5I4 CD37-213ENST00000598095 1598 ntTSL 2 BASIC27.28■■□□□ 1.96
PCDHAC2Q9Y5I4 GTSE1-AS1-202ENST00000623117 1518 ntBASIC27.28■■□□□ 1.96
PCDHAC2Q9Y5I4 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
PCDHAC2Q9Y5I4 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
PCDHAC2Q9Y5I4 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC27.28■■□□□ 1.96
PCDHAC2Q9Y5I4 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
PCDHAC2Q9Y5I4 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PCDHAC2Q9Y5I4 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
PCDHAC2Q9Y5I4 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
PCDHAC2Q9Y5I4 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC27.27■■□□□ 1.96
PCDHAC2Q9Y5I4 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC27.27■■□□□ 1.96
PCDHAC2Q9Y5I4 AL031602.1-201ENST00000633169 911 ntBASIC27.27■■□□□ 1.96
PCDHAC2Q9Y5I4 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
PCDHAC2Q9Y5I4 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC27.27■■□□□ 1.96
PCDHAC2Q9Y5I4 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC27.26■■□□□ 1.95
PCDHAC2Q9Y5I4 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC27.26■■□□□ 1.95
PCDHAC2Q9Y5I4 SNX3-202ENST00000349379 890 ntTSL 2 BASIC27.26■■□□□ 1.95
PCDHAC2Q9Y5I4 BX842568.3-201ENST00000418104 571 ntBASIC27.26■■□□□ 1.95
PCDHAC2Q9Y5I4 GRAMD4P2-201ENST00000423297 1097 ntBASIC27.26■■□□□ 1.95
PCDHAC2Q9Y5I4 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC27.26■■□□□ 1.95
PCDHAC2Q9Y5I4 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
PCDHAC2Q9Y5I4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
PCDHAC2Q9Y5I4 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PCDHAC2Q9Y5I4 AC135731.1-201ENST00000569415 2548 ntBASIC27.25■■□□□ 1.95
PCDHAC2Q9Y5I4 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PCDHAC2Q9Y5I4 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
PCDHAC2Q9Y5I4 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC27.25■■□□□ 1.95
PCDHAC2Q9Y5I4 pRNA.6-201ENST00000610482 90 ntBASIC27.25■■□□□ 1.95
PCDHAC2Q9Y5I4 pRNA.5-201ENST00000612139 90 ntBASIC27.25■■□□□ 1.95
PCDHAC2Q9Y5I4 pRNA.11-201ENST00000618423 90 ntBASIC27.25■■□□□ 1.95
PCDHAC2Q9Y5I4 pRNA.13-201ENST00000619112 90 ntBASIC27.25■■□□□ 1.95
PCDHAC2Q9Y5I4 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
PCDHAC2Q9Y5I4 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC27.25■■□□□ 1.95
PCDHAC2Q9Y5I4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PCDHAC2Q9Y5I4 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
PCDHAC2Q9Y5I4 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHAC2Q9Y5I4 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHAC2Q9Y5I4 HACD1-201ENST00000326961 773 ntTSL 2 BASIC27.24■■□□□ 1.95
PCDHAC2Q9Y5I4 GLI3-203ENST00000437480 451 ntTSL 2 BASIC27.24■■□□□ 1.95
PCDHAC2Q9Y5I4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC27.24■■□□□ 1.95
PCDHAC2Q9Y5I4 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHAC2Q9Y5I4 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC27.24■■□□□ 1.95
PCDHAC2Q9Y5I4 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHAC2Q9Y5I4 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC27.23■■□□□ 1.95
PCDHAC2Q9Y5I4 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC27.23■■□□□ 1.95
PCDHAC2Q9Y5I4 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
PCDHAC2Q9Y5I4 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
PCDHAC2Q9Y5I4 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
PCDHAC2Q9Y5I4 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC27.22■■□□□ 1.95
PCDHAC2Q9Y5I4 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
PCDHAC2Q9Y5I4 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC27.22■■□□□ 1.95
PCDHAC2Q9Y5I4 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
PCDHAC2Q9Y5I4 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
PCDHAC2Q9Y5I4 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC27.22■■□□□ 1.95
PCDHAC2Q9Y5I4 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC27.22■■□□□ 1.95
PCDHAC2Q9Y5I4 MPST-208ENST00000628507 698 ntTSL 5 BASIC27.22■■□□□ 1.95
PCDHAC2Q9Y5I4 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
PCDHAC2Q9Y5I4 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
PCDHAC2Q9Y5I4 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC27.21■■□□□ 1.95
PCDHAC2Q9Y5I4 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
PCDHAC2Q9Y5I4 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC27.21■■□□□ 1.95
PCDHAC2Q9Y5I4 IKBKGP1-201ENST00000612193 1073 ntBASIC27.21■■□□□ 1.95
PCDHAC2Q9Y5I4 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
PCDHAC2Q9Y5I4 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC27.21■■□□□ 1.95
PCDHAC2Q9Y5I4 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PCDHAC2Q9Y5I4 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PCDHAC2Q9Y5I4 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
PCDHAC2Q9Y5I4 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.95
PCDHAC2Q9Y5I4 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC27.2■■□□□ 1.94
PCDHAC2Q9Y5I4 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
PCDHAC2Q9Y5I4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
PCDHAC2Q9Y5I4 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PCDHAC2Q9Y5I4 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
PCDHAC2Q9Y5I4 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PCDHAC2Q9Y5I4 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
PCDHAC2Q9Y5I4 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PCDHAC2Q9Y5I4 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC27.18■■□□□ 1.94
PCDHAC2Q9Y5I4 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PCDHAC2Q9Y5I4 SLC47A1P1-202ENST00000449666 945 ntBASIC27.18■■□□□ 1.94
PCDHAC2Q9Y5I4 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC27.18■■□□□ 1.94
PCDHAC2Q9Y5I4 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC27.17■■□□□ 1.94
PCDHAC2Q9Y5I4 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PCDHAC2Q9Y5I4 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PCDHAC2Q9Y5I4 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC27.17■■□□□ 1.94
PCDHAC2Q9Y5I4 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC27.17■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms