Protein–RNA interactions for Protein: Q9C098

DCLK3, Serine/threonine-protein kinase DCLK3, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK3Q9C098 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC24.01■■□□□ 1.43
DCLK3Q9C098 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC24■■□□□ 1.43
DCLK3Q9C098 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24■■□□□ 1.43
DCLK3Q9C098 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC24■■□□□ 1.43
DCLK3Q9C098 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC24■■□□□ 1.43
DCLK3Q9C098 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
DCLK3Q9C098 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
DCLK3Q9C098 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
DCLK3Q9C098 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.99■■□□□ 1.43
DCLK3Q9C098 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.99■■□□□ 1.43
DCLK3Q9C098 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.99■■□□□ 1.43
DCLK3Q9C098 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.99■■□□□ 1.43
DCLK3Q9C098 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
DCLK3Q9C098 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC23.98■■□□□ 1.43
DCLK3Q9C098 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
DCLK3Q9C098 AC004448.1-201ENST00000458332 883 ntBASIC23.98■■□□□ 1.43
DCLK3Q9C098 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.98■■□□□ 1.43
DCLK3Q9C098 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.98■■□□□ 1.43
DCLK3Q9C098 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
DCLK3Q9C098 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
DCLK3Q9C098 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
DCLK3Q9C098 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.97■■□□□ 1.43
DCLK3Q9C098 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
DCLK3Q9C098 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.97■■□□□ 1.43
DCLK3Q9C098 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.97■■□□□ 1.43
DCLK3Q9C098 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
DCLK3Q9C098 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.97■■□□□ 1.43
DCLK3Q9C098 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
DCLK3Q9C098 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
DCLK3Q9C098 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
DCLK3Q9C098 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
DCLK3Q9C098 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.96■■□□□ 1.43
DCLK3Q9C098 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.96■■□□□ 1.43
DCLK3Q9C098 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.96■■□□□ 1.43
DCLK3Q9C098 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
DCLK3Q9C098 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
DCLK3Q9C098 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.96■■□□□ 1.43
DCLK3Q9C098 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.96■■□□□ 1.43
DCLK3Q9C098 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.96■■□□□ 1.43
DCLK3Q9C098 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.96■■□□□ 1.43
DCLK3Q9C098 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
DCLK3Q9C098 AL356740.2-201ENST00000601559 647 ntBASIC23.96■■□□□ 1.43
DCLK3Q9C098 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
DCLK3Q9C098 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.96■■□□□ 1.43
DCLK3Q9C098 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
DCLK3Q9C098 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.43
DCLK3Q9C098 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
DCLK3Q9C098 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.95■■□□□ 1.42
DCLK3Q9C098 AC008406.3-201ENST00000620001 1374 ntBASIC23.95■■□□□ 1.42
DCLK3Q9C098 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.95■■□□□ 1.42
DCLK3Q9C098 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
DCLK3Q9C098 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.95■■□□□ 1.42
DCLK3Q9C098 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.95■■□□□ 1.42
DCLK3Q9C098 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
DCLK3Q9C098 AL117332.1-201ENST00000622628 974 ntBASIC23.95■■□□□ 1.42
DCLK3Q9C098 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.95■■□□□ 1.42
DCLK3Q9C098 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
DCLK3Q9C098 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.94■■□□□ 1.42
DCLK3Q9C098 MIR3621-201ENST00000580529 85 ntBASIC23.94■■□□□ 1.42
DCLK3Q9C098 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.94■■□□□ 1.42
DCLK3Q9C098 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.94■■□□□ 1.42
DCLK3Q9C098 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
DCLK3Q9C098 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
DCLK3Q9C098 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.93■■□□□ 1.42
DCLK3Q9C098 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
DCLK3Q9C098 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.93■■□□□ 1.42
DCLK3Q9C098 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
DCLK3Q9C098 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.93■■□□□ 1.42
DCLK3Q9C098 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
DCLK3Q9C098 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
DCLK3Q9C098 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
DCLK3Q9C098 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
DCLK3Q9C098 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC23.92■■□□□ 1.42
DCLK3Q9C098 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.92■■□□□ 1.42
DCLK3Q9C098 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.92■■□□□ 1.42
DCLK3Q9C098 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
DCLK3Q9C098 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.92■■□□□ 1.42
DCLK3Q9C098 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC23.92■■□□□ 1.42
DCLK3Q9C098 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
DCLK3Q9C098 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
DCLK3Q9C098 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
DCLK3Q9C098 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
DCLK3Q9C098 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.91■■□□□ 1.42
DCLK3Q9C098 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.91■■□□□ 1.42
DCLK3Q9C098 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
DCLK3Q9C098 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
DCLK3Q9C098 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.91■■□□□ 1.42
DCLK3Q9C098 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
DCLK3Q9C098 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
DCLK3Q9C098 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.9■■□□□ 1.42
DCLK3Q9C098 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.9■■□□□ 1.42
DCLK3Q9C098 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
DCLK3Q9C098 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
DCLK3Q9C098 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
DCLK3Q9C098 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
DCLK3Q9C098 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
DCLK3Q9C098 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.9■■□□□ 1.42
DCLK3Q9C098 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.9■■□□□ 1.42
DCLK3Q9C098 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.9■■□□□ 1.42
DCLK3Q9C098 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.9■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms