Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
KRTAP4-1Q9BYQ7 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
KRTAP4-1Q9BYQ7 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
KRTAP4-1Q9BYQ7 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC11.94□□□□□ -0.5
KRTAP4-1Q9BYQ7 SLC47A1P1-202ENST00000449666 945 ntBASIC11.94□□□□□ -0.5
KRTAP4-1Q9BYQ7 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
KRTAP4-1Q9BYQ7 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC11.94□□□□□ -0.5
KRTAP4-1Q9BYQ7 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC11.94□□□□□ -0.5
KRTAP4-1Q9BYQ7 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
KRTAP4-1Q9BYQ7 pRNA.6-201ENST00000610482 90 ntBASIC11.94□□□□□ -0.5
KRTAP4-1Q9BYQ7 pRNA.5-201ENST00000612139 90 ntBASIC11.94□□□□□ -0.5
KRTAP4-1Q9BYQ7 pRNA.11-201ENST00000618423 90 ntBASIC11.94□□□□□ -0.5
KRTAP4-1Q9BYQ7 pRNA.13-201ENST00000619112 90 ntBASIC11.94□□□□□ -0.5
KRTAP4-1Q9BYQ7 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
KRTAP4-1Q9BYQ7 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
KRTAP4-1Q9BYQ7 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
KRTAP4-1Q9BYQ7 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC11.94□□□□□ -0.5
KRTAP4-1Q9BYQ7 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
KRTAP4-1Q9BYQ7 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC11.93□□□□□ -0.5
KRTAP4-1Q9BYQ7 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
KRTAP4-1Q9BYQ7 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
KRTAP4-1Q9BYQ7 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
KRTAP4-1Q9BYQ7 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
KRTAP4-1Q9BYQ7 AK1-201ENST00000223836 736 ntTSL 3 BASIC11.93□□□□□ -0.5
KRTAP4-1Q9BYQ7 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
KRTAP4-1Q9BYQ7 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
KRTAP4-1Q9BYQ7 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC11.93□□□□□ -0.5
KRTAP4-1Q9BYQ7 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
KRTAP4-1Q9BYQ7 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC11.93□□□□□ -0.5
KRTAP4-1Q9BYQ7 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC11.93□□□□□ -0.5
KRTAP4-1Q9BYQ7 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC11.93□□□□□ -0.5
KRTAP4-1Q9BYQ7 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC11.93□□□□□ -0.5
KRTAP4-1Q9BYQ7 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
KRTAP4-1Q9BYQ7 AL137784.2-201ENST00000607332 1000 ntBASIC11.93□□□□□ -0.5
KRTAP4-1Q9BYQ7 MIR6084-201ENST00000622012 110 ntBASIC11.93□□□□□ -0.5
KRTAP4-1Q9BYQ7 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
KRTAP4-1Q9BYQ7 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
KRTAP4-1Q9BYQ7 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
KRTAP4-1Q9BYQ7 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
KRTAP4-1Q9BYQ7 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC11.93□□□□□ -0.5
KRTAP4-1Q9BYQ7 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
KRTAP4-1Q9BYQ7 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
KRTAP4-1Q9BYQ7 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
KRTAP4-1Q9BYQ7 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
KRTAP4-1Q9BYQ7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
KRTAP4-1Q9BYQ7 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC11.92□□□□□ -0.5
KRTAP4-1Q9BYQ7 TSPY26P-201ENST00000476365 1326 ntBASIC11.92□□□□□ -0.5
KRTAP4-1Q9BYQ7 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
KRTAP4-1Q9BYQ7 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
KRTAP4-1Q9BYQ7 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
KRTAP4-1Q9BYQ7 YBX1P1-201ENST00000445822 960 ntBASIC11.92□□□□□ -0.5
KRTAP4-1Q9BYQ7 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
KRTAP4-1Q9BYQ7 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC11.92□□□□□ -0.5
KRTAP4-1Q9BYQ7 RAB43-208ENST00000615093 783 ntTSL 5 BASIC11.92□□□□□ -0.5
KRTAP4-1Q9BYQ7 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
KRTAP4-1Q9BYQ7 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
KRTAP4-1Q9BYQ7 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC11.91□□□□□ -0.5
KRTAP4-1Q9BYQ7 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
KRTAP4-1Q9BYQ7 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
KRTAP4-1Q9BYQ7 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
KRTAP4-1Q9BYQ7 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
KRTAP4-1Q9BYQ7 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
KRTAP4-1Q9BYQ7 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
KRTAP4-1Q9BYQ7 AC004911.1-201ENST00000416316 871 ntBASIC11.91□□□□□ -0.5
KRTAP4-1Q9BYQ7 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC11.91□□□□□ -0.5
KRTAP4-1Q9BYQ7 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
KRTAP4-1Q9BYQ7 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC11.91□□□□□ -0.5
KRTAP4-1Q9BYQ7 AC126544.1-201ENST00000580842 1059 ntBASIC11.91□□□□□ -0.5
KRTAP4-1Q9BYQ7 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC11.91□□□□□ -0.5
KRTAP4-1Q9BYQ7 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC11.91□□□□□ -0.5
KRTAP4-1Q9BYQ7 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
KRTAP4-1Q9BYQ7 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
KRTAP4-1Q9BYQ7 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
KRTAP4-1Q9BYQ7 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
KRTAP4-1Q9BYQ7 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
KRTAP4-1Q9BYQ7 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
KRTAP4-1Q9BYQ7 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC11.91□□□□□ -0.5
KRTAP4-1Q9BYQ7 CEBPA-AS1-201ENST00000592982 2198 ntBASIC11.91□□□□□ -0.5
KRTAP4-1Q9BYQ7 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
KRTAP4-1Q9BYQ7 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC11.9□□□□□ -0.5
KRTAP4-1Q9BYQ7 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
KRTAP4-1Q9BYQ7 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
KRTAP4-1Q9BYQ7 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
KRTAP4-1Q9BYQ7 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
KRTAP4-1Q9BYQ7 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
KRTAP4-1Q9BYQ7 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC11.9□□□□□ -0.5
KRTAP4-1Q9BYQ7 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
KRTAP4-1Q9BYQ7 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
KRTAP4-1Q9BYQ7 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC11.9□□□□□ -0.5
KRTAP4-1Q9BYQ7 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
KRTAP4-1Q9BYQ7 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
KRTAP4-1Q9BYQ7 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC11.9□□□□□ -0.5
KRTAP4-1Q9BYQ7 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC11.9□□□□□ -0.5
KRTAP4-1Q9BYQ7 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
KRTAP4-1Q9BYQ7 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
KRTAP4-1Q9BYQ7 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC11.89□□□□□ -0.51
KRTAP4-1Q9BYQ7 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC11.89□□□□□ -0.51
KRTAP4-1Q9BYQ7 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
KRTAP4-1Q9BYQ7 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
KRTAP4-1Q9BYQ7 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms